RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 FGBP02675 491 aa13.87□□□□□ -0.19
VRK3-205ENST00000593919 SYN1P17600 705 aa13.87□□□□□ -0.19
VRK3-205ENST00000593919 MAN1A1P33908 653 aa13.87□□□□□ -0.19
VRK3-205ENST00000593919 GGCXP38435 758 aa13.87□□□□□ -0.19
VRK3-205ENST00000593919 PEX5P50542 639 aa13.87□□□□□ -0.19
VRK3-205ENST00000593919 SLC6A3Q01959 620 aa13.87□□□□□ -0.19
VRK3-205ENST00000593919 TAF5Q15542 800 aa13.87□□□□□ -0.19
VRK3-205ENST00000593919 CTXN3Q4LDR2 81 aa13.87□□□□□ -0.19
VRK3-205ENST00000593919 SLC39A12Q504Y0 691 aa13.87□□□□□ -0.19
VRK3-205ENST00000593919 SPOUT1Q5T280 376 aaKnown RBP13.87□□□□□ -0.19
VRK3-205ENST00000593919 ZNF280DQ6N043 979 aa13.87□□□□□ -0.19
VRK3-205ENST00000593919 TAS1R1Q7RTX1 841 aa13.87□□□□□ -0.19
VRK3-205ENST00000593919 ZDHHC17Q8IUH5 632 aa13.87□□□□□ -0.19
VRK3-205ENST00000593919 CMTR2Q8IYT2 770 aaKnown RBP13.87□□□□□ -0.19
VRK3-205ENST00000593919 RIN2Q8WYP3 895 aaPredicted RBP13.87□□□□□ -0.19
VRK3-205ENST00000593919 IGSF21Q96ID5 467 aa13.87□□□□□ -0.19
VRK3-205ENST00000593919 YME1L1Q96TA2 773 aa13.87□□□□□ -0.19
VRK3-205ENST00000593919 ZCWPW1Q9H0M4 648 aa13.87□□□□□ -0.19
VRK3-205ENST00000593919 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.87□□□□□ -0.19
VRK3-205ENST00000593919 LCMT1Q9UIC8 334 aa13.87□□□□□ -0.19
VRK3-205ENST00000593919 NFU1Q9UMS0 254 aa13.87□□□□□ -0.19
VRK3-205ENST00000593919 USTQ9Y2C2 406 aa13.87□□□□□ -0.19
VRK3-205ENST00000593919 MYO16Q9Y6X6 1858 aa13.86□□□□□ -0.19
VRK3-205ENST00000593919 ZNF638Q14966 1978 aaKnown RBP13.86□□□□□ -0.19
VRK3-205ENST00000593919 KRIT1O00522 736 aa13.86□□□□□ -0.19
VRK3-205ENST00000593919 RNF40O75150 1001 aa13.86□□□□□ -0.19
VRK3-205ENST00000593919 PSMA2P25787 234 aa13.86□□□□□ -0.19
VRK3-205ENST00000593919 CTNNA2P26232 953 aa13.86□□□□□ -0.19
VRK3-205ENST00000593919 FLT3P36888 993 aa13.86□□□□□ -0.19
VRK3-205ENST00000593919 PIGHQ14442 188 aaPredicted RBP13.86□□□□□ -0.19
VRK3-205ENST00000593919 TRNP1Q6NT89 227 aa13.86□□□□□ -0.19
VRK3-205ENST00000593919 EMBQ6PCB8 327 aa13.86□□□□□ -0.19
VRK3-205ENST00000593919 KCNT2Q6UVM3 1135 aa13.86□□□□□ -0.19
VRK3-205ENST00000593919 RASGEF1CQ8N431 466 aa13.86□□□□□ -0.19
VRK3-205ENST00000593919 NIPA2Q8N8Q9 360 aa13.86□□□□□ -0.19
VRK3-205ENST00000593919 CASKIN2Q8WXE0 1202 aa13.86□□□□□ -0.19
VRK3-205ENST00000593919 KCTD13Q8WZ19 329 aa13.86□□□□□ -0.19
VRK3-205ENST00000593919 KHSRPQ92945 711 aaKnown RBP eCLIP13.86□□□□□ -0.19
VRK3-205ENST00000593919 VN1R3Q9BXE9 311 aa13.86□□□□□ -0.19
VRK3-205ENST00000593919 CARD9Q9H257 536 aa13.86□□□□□ -0.19
VRK3-205ENST00000593919 CSNK1G1Q9HCP0 422 aa13.86□□□□□ -0.19
VRK3-205ENST00000593919 PCDHA3Q9Y5H8 950 aa13.86□□□□□ -0.19
VRK3-205ENST00000593919 MRPL42Q9Y6G3 142 aaKnown RBP13.86□□□□□ -0.19
VRK3-205ENST00000593919 GOLGA6BA6NDN3 693 aa13.85□□□□□ -0.19
VRK3-205ENST00000593919 C2CD4BA6NLJ0 364 aa13.85□□□□□ -0.19
VRK3-205ENST00000593919 HHLA1C9JL84 531 aa13.85□□□□□ -0.19
VRK3-205ENST00000593919 EFEMP2O95967 443 aa13.85□□□□□ -0.19
VRK3-205ENST00000593919 TCF4P15884 667 aa13.85□□□□□ -0.19
VRK3-205ENST00000593919 TAS2R40P59535 323 aa13.85□□□□□ -0.19
VRK3-205ENST00000593919 TMEM240Q5SV17 173 aa13.85□□□□□ -0.19
VRK3-205ENST00000593919 C4orf50Q6ZRC1 276 aa13.85□□□□□ -0.19
VRK3-205ENST00000593919 GPRIN1Q7Z2K8 1008 aa13.85□□□□□ -0.19
VRK3-205ENST00000593919 SPATA2LQ8IUW3 424 aaPredicted RBP13.85□□□□□ -0.19
VRK3-205ENST00000593919 DCP1BQ8IZD4 617 aaKnown RBP13.85□□□□□ -0.19
VRK3-205ENST00000593919 TSEN2Q8NCE0 465 aaKnown RBP13.85□□□□□ -0.19
VRK3-205ENST00000593919 TTPALQ9BTX7 342 aa13.85□□□□□ -0.19
VRK3-205ENST00000593919 LRRC4Q9HBW1 653 aa13.85□□□□□ -0.19
VRK3-205ENST00000593919 CXXC1Q9P0U4 656 aaPredicted RBP13.85□□□□□ -0.19
VRK3-205ENST00000593919 GJB5O95377 273 aa13.85□□□□□ -0.19
VRK3-205ENST00000593919 SSR1P43307 286 aaKnown RBP13.85□□□□□ -0.19
VRK3-205ENST00000593919 NDUFV1P49821 464 aa13.85□□□□□ -0.19
VRK3-205ENST00000593919 TKTL1P51854 596 aa13.85□□□□□ -0.19
VRK3-205ENST00000593919 ADCY1Q08828 1119 aa13.85□□□□□ -0.19
VRK3-205ENST00000593919 ZNF211Q13398 564 aaPredicted RBP13.85□□□□□ -0.19
VRK3-205ENST00000593919 TRADDQ15628 312 aa13.85□□□□□ -0.19
VRK3-205ENST00000593919 RAB41Q5JT25 222 aa13.85□□□□□ -0.19
VRK3-205ENST00000593919 PSRC1Q6PGN9 363 aaPredicted RBP13.85□□□□□ -0.19
VRK3-205ENST00000593919 SLC26A9Q7LBE3 791 aa13.85□□□□□ -0.19
VRK3-205ENST00000593919 RNF168Q8IYW5 571 aaPredicted RBP13.85□□□□□ -0.19
VRK3-205ENST00000593919 SIX6OS1Q8N1H7 587 aa13.85□□□□□ -0.19
VRK3-205ENST00000593919 NDRG1Q92597 394 aaKnown RBP13.85□□□□□ -0.19
VRK3-205ENST00000593919 CAVIN3Q969G5 261 aa13.85□□□□□ -0.19
VRK3-205ENST00000593919 ZNF558Q96NG5 402 aa13.85□□□□□ -0.19
VRK3-205ENST00000593919 DDX47Q9H0S4 455 aaKnown RBP13.85□□□□□ -0.19
VRK3-205ENST00000593919 DMAP1Q9NPF5 467 aaPredicted RBP13.85□□□□□ -0.19
VRK3-205ENST00000593919 ABI2Q9NYB9 513 aaPredicted RBP13.85□□□□□ -0.19
VRK3-205ENST00000593919 OR6C75A6NL08 312 aa13.84□□□□□ -0.19
VRK3-205ENST00000593919 AGPSO00116 658 aa13.84□□□□□ -0.19
VRK3-205ENST00000593919 PSTPIP1O43586 416 aa13.84□□□□□ -0.19
VRK3-205ENST00000593919 FGGP02679 453 aa13.84□□□□□ -0.19
VRK3-205ENST00000593919 FAM153BP0C7A2 387 aa13.84□□□□□ -0.19
VRK3-205ENST00000593919 PDGFRAP16234 1089 aa13.84□□□□□ -0.19
VRK3-205ENST00000593919 GPD1P21695 349 aa13.84□□□□□ -0.19
VRK3-205ENST00000593919 CYP2F1P24903 491 aa13.84□□□□□ -0.19
VRK3-205ENST00000593919 SCNN1AP37088 669 aa13.84□□□□□ -0.19
VRK3-205ENST00000593919 LMAN1P49257 510 aa13.84□□□□□ -0.19
VRK3-205ENST00000593919 ZNF143P52747 638 aaPredicted RBP13.84□□□□□ -0.19
VRK3-205ENST00000593919 RWDD2BP57060 319 aa13.84□□□□□ -0.19
VRK3-205ENST00000593919 USP41Q3LFD5 358 aa13.84□□□□□ -0.19
VRK3-205ENST00000593919 FAM153CQ494X1 144 aa13.84□□□□□ -0.19
VRK3-205ENST00000593919 AADACL2Q6P093 401 aa13.84□□□□□ -0.19
VRK3-205ENST00000593919 PRSS55Q6UWB4 352 aaPredicted RBP13.84□□□□□ -0.19
VRK3-205ENST00000593919 RSPO2Q6UXX9 243 aaPredicted RBP13.84□□□□□ -0.19
VRK3-205ENST00000593919 ANKS3Q6ZW76 656 aa13.84□□□□□ -0.19
VRK3-205ENST00000593919 SLC39A11Q8N1S5 342 aa13.84□□□□□ -0.19
VRK3-205ENST00000593919 COLGALT1Q8NBJ5 622 aa13.84□□□□□ -0.19
VRK3-205ENST00000593919 RXFP2Q8WXD0 754 aa13.84□□□□□ -0.19
VRK3-205ENST00000593919 EXOC4Q96A65 974 aa13.84□□□□□ -0.19
VRK3-205ENST00000593919 RNPC3Q96LT9 517 aaKnown RBP13.84□□□□□ -0.19
VRK3-205ENST00000593919 FAM153AQ9UHL3 310 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms