RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 LINC00597Q9H2U6 94 aa19.55■□□□□ 0.72
SHKBP1-202ENST00000593764 GMIPQ9P107 970 aa19.55■□□□□ 0.72
SHKBP1-202ENST00000593764 LEFTY2O00292 366 aa19.54■□□□□ 0.72
SHKBP1-202ENST00000593764 COCHO43405 550 aa19.54■□□□□ 0.72
SHKBP1-202ENST00000593764 NBL1P41271 181 aa19.54■□□□□ 0.72
SHKBP1-202ENST00000593764 MRE11P49959 708 aa19.54■□□□□ 0.72
SHKBP1-202ENST00000593764 PDGFRLQ15198 375 aa19.54■□□□□ 0.72
SHKBP1-202ENST00000593764 ARHGAP17Q68EM7 881 aa19.54■□□□□ 0.72
SHKBP1-202ENST00000593764 TTC16Q8NEE8 873 aa19.54■□□□□ 0.72
SHKBP1-202ENST00000593764 DNAI2Q9GZS0 605 aa19.54■□□□□ 0.72
SHKBP1-202ENST00000593764 CHRDQ9H2X0 955 aa19.54■□□□□ 0.72
SHKBP1-202ENST00000593764 FBXO44Q9H4M3 255 aa19.54■□□□□ 0.72
SHKBP1-202ENST00000593764 PNPLA8Q9NP80 782 aa19.54■□□□□ 0.72
SHKBP1-202ENST00000593764 SPATA6Q9NWH7 488 aaPredicted RBP19.54■□□□□ 0.72
SHKBP1-202ENST00000593764 DUS2Q9NX74 493 aaKnown RBP19.54■□□□□ 0.72
SHKBP1-202ENST00000593764 SCML2Q9UQR0 700 aa19.54■□□□□ 0.72
SHKBP1-202ENST00000593764 CPQQ9Y646 472 aa19.54■□□□□ 0.72
SHKBP1-202ENST00000593764 WNT6Q9Y6F9 365 aa19.54■□□□□ 0.72
SHKBP1-202ENST00000593764 ZFHX2Q9C0A1 2572 aaPredicted RBP19.53■□□□□ 0.72
SHKBP1-202ENST00000593764 PROB1E7EW31 1015 aa19.53■□□□□ 0.72
SHKBP1-202ENST00000593764 SP9P0CG40 484 aa19.53■□□□□ 0.72
SHKBP1-202ENST00000593764 TBXAS1P24557 533 aaPredicted RBP19.53■□□□□ 0.72
SHKBP1-202ENST00000593764 TUBP50607 506 aa19.53■□□□□ 0.72
SHKBP1-202ENST00000593764 KIF11P52732 1056 aa19.53■□□□□ 0.72
SHKBP1-202ENST00000593764 MTAPQ13126 283 aa19.53■□□□□ 0.72
SHKBP1-202ENST00000593764 GAS6Q14393 721 aa19.53■□□□□ 0.72
SHKBP1-202ENST00000593764 PON2Q15165 354 aa19.53■□□□□ 0.72
SHKBP1-202ENST00000593764 EML3Q32P44 896 aa19.53■□□□□ 0.72
SHKBP1-202ENST00000593764 HECTD3Q5T447 861 aa19.53■□□□□ 0.72
SHKBP1-202ENST00000593764 IRF2BP1Q8IU81 584 aa19.53■□□□□ 0.72
SHKBP1-202ENST00000593764 EHBP1Q8NDI1 1231 aa19.53■□□□□ 0.72
SHKBP1-202ENST00000593764 JAKMIP2Q96AA8 810 aa19.53■□□□□ 0.72
SHKBP1-202ENST00000593764 ZFRQ96KR1 1074 aaKnown RBP19.53■□□□□ 0.72
SHKBP1-202ENST00000593764 CCSER2Q9H7U1 834 aa19.53■□□□□ 0.72
SHKBP1-202ENST00000593764 ECT2Q9H8V3 914 aa19.53■□□□□ 0.72
SHKBP1-202ENST00000593764 SMPD4Q9NXE4 827 aa19.53■□□□□ 0.72
SHKBP1-202ENST00000593764 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.53■□□□□ 0.72
SHKBP1-202ENST00000593764 PATJQ8NI35 1801 aa19.53■□□□□ 0.72
SHKBP1-202ENST00000593764 HELZP42694 1942 aaKnown RBP19.53■□□□□ 0.72
SHKBP1-202ENST00000593764 FGFR1OPO95684 399 aaKnown RBP19.52■□□□□ 0.72
SHKBP1-202ENST00000593764 AFPP02771 609 aaKnown RBP19.52■□□□□ 0.72
SHKBP1-202ENST00000593764 CCDC192P0DO97 292 aa19.52■□□□□ 0.72
SHKBP1-202ENST00000593764 ACO1P21399 889 aaKnown RBP19.52■□□□□ 0.72
SHKBP1-202ENST00000593764 CCINQ13939 588 aa19.52■□□□□ 0.72
SHKBP1-202ENST00000593764 MAMSTRQ6ZN01 415 aa19.52■□□□□ 0.72
SHKBP1-202ENST00000593764 KIAA1958Q8N8K9 716 aa19.52■□□□□ 0.72
SHKBP1-202ENST00000593764 KAT5Q92993 513 aa19.52■□□□□ 0.72
SHKBP1-202ENST00000593764 NT5C1BQ96P26 610 aa19.52■□□□□ 0.72
SHKBP1-202ENST00000593764 IPO9Q96P70 1041 aaKnown RBP19.52■□□□□ 0.72
SHKBP1-202ENST00000593764 NUP62CLQ9H1M0 184 aa19.52■□□□□ 0.72
SHKBP1-202ENST00000593764 RBM12Q9NTZ6 932 aaKnown RBP19.52■□□□□ 0.72
SHKBP1-202ENST00000593764 OSER1Q9NX31 292 aa19.52■□□□□ 0.72
SHKBP1-202ENST00000593764 USP3Q9Y6I4 520 aa19.52■□□□□ 0.72
SHKBP1-202ENST00000593764 TRDMT1O14717 391 aaKnown RBP19.51■□□□□ 0.71
SHKBP1-202ENST00000593764 CYP26A1O43174 497 aa19.51■□□□□ 0.71
SHKBP1-202ENST00000593764 LAMTOR5O43504 91 aa19.51■□□□□ 0.71
SHKBP1-202ENST00000593764 MBL2P11226 248 aaPredicted RBP19.51■□□□□ 0.71
SHKBP1-202ENST00000593764 GJA4P35212 333 aa19.51■□□□□ 0.71
SHKBP1-202ENST00000593764 IFNAR2P48551 515 aa19.51■□□□□ 0.71
SHKBP1-202ENST00000593764 YWHAEP62258 255 aaKnown RBP19.51■□□□□ 0.71
SHKBP1-202ENST00000593764 CETN1Q12798 172 aa19.51■□□□□ 0.71
SHKBP1-202ENST00000593764 DPCR1Q3MIW9 517 aa19.51■□□□□ 0.71
SHKBP1-202ENST00000593764 TMEM196Q5HYL7 178 aa19.51■□□□□ 0.71
SHKBP1-202ENST00000593764 TTC30AQ86WT1 665 aa19.51■□□□□ 0.71
SHKBP1-202ENST00000593764 ARHGEF19Q8IW93 802 aa19.51■□□□□ 0.71
SHKBP1-202ENST00000593764 ANKRD52Q8NB46 1076 aa19.51■□□□□ 0.71
SHKBP1-202ENST00000593764 GPT2Q8TD30 523 aa19.51■□□□□ 0.71
SHKBP1-202ENST00000593764 ATP2A3Q93084 1043 aa19.51■□□□□ 0.71
SHKBP1-202ENST00000593764 UBXN6Q9BZV1 441 aa19.51■□□□□ 0.71
SHKBP1-202ENST00000593764 FBRSL1Q9HCM7 1045 aaKnown RBP19.51■□□□□ 0.71
SHKBP1-202ENST00000593764 TLR8Q9NR97 1041 aaKnown RBP19.51■□□□□ 0.71
SHKBP1-202ENST00000593764 FBXO4Q9UKT5 387 aa19.51■□□□□ 0.71
SHKBP1-202ENST00000593764 RNF225M0QZC1 329 aaPredicted RBP19.5■□□□□ 0.71
SHKBP1-202ENST00000593764 TLR5O60602 858 aa19.5■□□□□ 0.71
SHKBP1-202ENST00000593764 TBX18O95935 607 aa19.5■□□□□ 0.71
SHKBP1-202ENST00000593764 NAIF1Q69YI7 327 aaPredicted RBP19.5■□□□□ 0.71
SHKBP1-202ENST00000593764 RRAGAQ7L523 313 aa19.5■□□□□ 0.71
SHKBP1-202ENST00000593764 ADGRG2Q8IZP9 1017 aa19.5■□□□□ 0.71
SHKBP1-202ENST00000593764 PPM1KQ8N3J5 372 aa19.5■□□□□ 0.71
SHKBP1-202ENST00000593764 CPA6Q8N4T0 437 aa19.5■□□□□ 0.71
SHKBP1-202ENST00000593764 CNOT6LQ96LI5 555 aaKnown RBP19.5■□□□□ 0.71
SHKBP1-202ENST00000593764 NMUR1Q9HB89 426 aa19.5■□□□□ 0.71
SHKBP1-202ENST00000593764 PRMT8Q9NR22 394 aaPredicted RBP19.5■□□□□ 0.71
SHKBP1-202ENST00000593764 CFAP97Q9P2B7 532 aa19.5■□□□□ 0.71
SHKBP1-202ENST00000593764 SCAMP3O14828 347 aaKnown RBP19.49■□□□□ 0.71
SHKBP1-202ENST00000593764 ZNF528Q3MIS6 628 aa19.49■□□□□ 0.71
SHKBP1-202ENST00000593764 SGO2Q562F6 1265 aa19.49■□□□□ 0.71
SHKBP1-202ENST00000593764 RAB41Q5JT25 222 aa19.49■□□□□ 0.71
SHKBP1-202ENST00000593764 DGKKQ5KSL6 1271 aa19.49■□□□□ 0.71
SHKBP1-202ENST00000593764 FSTL4Q6MZW2 842 aa19.49■□□□□ 0.71
SHKBP1-202ENST00000593764 TMEM270Q6UE05 265 aa19.49■□□□□ 0.71
SHKBP1-202ENST00000593764 Q6ZS52 159 aa19.49■□□□□ 0.71
SHKBP1-202ENST00000593764 CCDC186Q7Z3E2 898 aa19.49■□□□□ 0.71
SHKBP1-202ENST00000593764 SCD5Q86SK9 330 aa19.49■□□□□ 0.71
SHKBP1-202ENST00000593764 PIGZQ86VD9 579 aa19.49■□□□□ 0.71
SHKBP1-202ENST00000593764 TFAP2BQ92481 460 aa19.49■□□□□ 0.71
SHKBP1-202ENST00000593764 WBP2Q969T9 261 aa19.49■□□□□ 0.71
SHKBP1-202ENST00000593764 KREMEN1Q96MU8 473 aa19.49■□□□□ 0.71
SHKBP1-202ENST00000593764 GBP4Q96PP9 640 aa19.49■□□□□ 0.71
SHKBP1-202ENST00000593764 IER2Q9BTL4 223 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms