RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 OXCT2Q9BYC2 517 aaPredicted RBP10.18□□□□□ -0.78
DDX39A-220ENST00000593008 NHEJ1Q9H9Q4 299 aaPredicted RBP10.18□□□□□ -0.78
DDX39A-220ENST00000593008 ZNF334Q9HCZ1 680 aaPredicted RBP10.18□□□□□ -0.78
DDX39A-220ENST00000593008 IMPACTQ9P2X3 320 aa10.18□□□□□ -0.78
DDX39A-220ENST00000593008 EPS15L1Q9UBC2 864 aa10.18□□□□□ -0.78
DDX39A-220ENST00000593008 REXO2Q9Y3B8 237 aaKnown RBP10.18□□□□□ -0.78
DDX39A-220ENST00000593008 MRPS23Q9Y3D9 190 aaKnown RBP10.18□□□□□ -0.78
DDX39A-220ENST00000593008 DAAM1Q9Y4D1 1078 aa10.18□□□□□ -0.78
DDX39A-220ENST00000593008 E5RJQ4 531 aa10.17□□□□□ -0.78
DDX39A-220ENST00000593008 NARSO43776 548 aaKnown RBP10.17□□□□□ -0.78
DDX39A-220ENST00000593008 PDGFBP01127 241 aaPredicted RBP10.17□□□□□ -0.78
DDX39A-220ENST00000593008 CYP1A1P04798 512 aaPredicted RBP10.17□□□□□ -0.78
DDX39A-220ENST00000593008 POU2F2P09086 479 aa10.17□□□□□ -0.78
DDX39A-220ENST00000593008 TPM1P09493 284 aa10.17□□□□□ -0.78
DDX39A-220ENST00000593008 MYL4P12829 197 aa10.17□□□□□ -0.78
DDX39A-220ENST00000593008 LCP1P13796 627 aa10.17□□□□□ -0.78
DDX39A-220ENST00000593008 GJA1P17302 382 aa10.17□□□□□ -0.78
DDX39A-220ENST00000593008 CEBPBP17676 345 aa10.17□□□□□ -0.78
DDX39A-220ENST00000593008 PTPN2P17706 415 aa10.17□□□□□ -0.78
DDX39A-220ENST00000593008 GRIK1P39086 918 aa10.17□□□□□ -0.78
DDX39A-220ENST00000593008 KIF11P52732 1056 aa10.17□□□□□ -0.78
DDX39A-220ENST00000593008 BCAT1P54687 386 aa10.17□□□□□ -0.78
DDX39A-220ENST00000593008 SIGLEC14Q08ET2 396 aa10.17□□□□□ -0.78
DDX39A-220ENST00000593008 ADIGQ0VDE8 80 aa10.17□□□□□ -0.78
DDX39A-220ENST00000593008 BST2Q10589 180 aaKnown RBP10.17□□□□□ -0.78
DDX39A-220ENST00000593008 PLD1Q13393 1074 aa10.17□□□□□ -0.78
DDX39A-220ENST00000593008 TDGQ13569 410 aa10.17□□□□□ -0.78
DDX39A-220ENST00000593008 TAF5Q15542 800 aa10.17□□□□□ -0.78
DDX39A-220ENST00000593008 NFE2Q16621 373 aaPredicted RBP10.17□□□□□ -0.78
DDX39A-220ENST00000593008 CLEC16AQ2KHT3 1053 aa10.17□□□□□ -0.78
DDX39A-220ENST00000593008 CFAP221Q4G0U5 840 aa10.17□□□□□ -0.78
DDX39A-220ENST00000593008 C4orf50Q6ZRC1 276 aa10.17□□□□□ -0.78
DDX39A-220ENST00000593008 RTL10Q7L3V2 364 aa10.17□□□□□ -0.78
DDX39A-220ENST00000593008 ELMOD1Q8N336 334 aa10.17□□□□□ -0.78
DDX39A-220ENST00000593008 ANKRD52Q8NB46 1076 aa10.17□□□□□ -0.78
DDX39A-220ENST00000593008 SYN2Q92777 582 aaPredicted RBP10.17□□□□□ -0.78
DDX39A-220ENST00000593008 PBXIP1Q96AQ6 731 aa10.17□□□□□ -0.78
DDX39A-220ENST00000593008 MCRS1Q96EZ8 462 aa10.17□□□□□ -0.78
DDX39A-220ENST00000593008 ASIC4Q96FT7 647 aa10.17□□□□□ -0.78
DDX39A-220ENST00000593008 ZNF512Q96ME7 567 aaPredicted RBP10.17□□□□□ -0.78
DDX39A-220ENST00000593008 PANX2Q96RD6 677 aa10.17□□□□□ -0.78
DDX39A-220ENST00000593008 PPP1R9BQ96SB3 815 aa10.17□□□□□ -0.78
DDX39A-220ENST00000593008 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.17□□□□□ -0.78
DDX39A-220ENST00000593008 RPP25Q9BUL9 199 aaKnown RBP10.17□□□□□ -0.78
DDX39A-220ENST00000593008 PDCL3Q9H2J4 239 aa10.17□□□□□ -0.78
DDX39A-220ENST00000593008 DMAP1Q9NPF5 467 aaPredicted RBP10.17□□□□□ -0.78
DDX39A-220ENST00000593008 ADAMTS1Q9UHI8 967 aa10.17□□□□□ -0.78
DDX39A-220ENST00000593008 CDH7Q9ULB5 785 aa10.17□□□□□ -0.78
DDX39A-220ENST00000593008 PCDHGC3Q9UN70 934 aa10.17□□□□□ -0.78
DDX39A-220ENST00000593008 ARIH1Q9Y4X5 557 aaPredicted RBP10.17□□□□□ -0.78
DDX39A-220ENST00000593008 NUMBLQ9Y6R0 609 aa10.17□□□□□ -0.78
DDX39A-220ENST00000593008 SLC38A8A6NNN8 435 aa10.16□□□□□ -0.78
DDX39A-220ENST00000593008 TNFRSF10BO14763 440 aa10.16□□□□□ -0.78
DDX39A-220ENST00000593008 TADA3O75528 432 aa10.16□□□□□ -0.78
DDX39A-220ENST00000593008 UNGP13051 313 aaPredicted RBP10.16□□□□□ -0.78
DDX39A-220ENST00000593008 CCR2P41597 374 aa10.16□□□□□ -0.78
DDX39A-220ENST00000593008 ALDH1A3P47895 512 aa10.16□□□□□ -0.78
DDX39A-220ENST00000593008 SLC5A3P53794 718 aa10.16□□□□□ -0.78
DDX39A-220ENST00000593008 EPHB3P54753 998 aa10.16□□□□□ -0.78
DDX39A-220ENST00000593008 PTP4A2Q12974 167 aa10.16□□□□□ -0.78
DDX39A-220ENST00000593008 HTR4Q13639 388 aa10.16□□□□□ -0.78
DDX39A-220ENST00000593008 PRSS36Q5K4E3 855 aa10.16□□□□□ -0.78
DDX39A-220ENST00000593008 POTEHQ6S545 545 aa10.16□□□□□ -0.78
DDX39A-220ENST00000593008 PARM1Q6UWI2 310 aa10.16□□□□□ -0.78
DDX39A-220ENST00000593008 FAM183BPQ6ZVS7 135 aa10.16□□□□□ -0.78
DDX39A-220ENST00000593008 PDZD4Q76G19 769 aaPredicted RBP10.16□□□□□ -0.78
DDX39A-220ENST00000593008 BHLHA9Q7RTU4 235 aa10.16□□□□□ -0.78
DDX39A-220ENST00000593008 LRRC8AQ8IWT6 810 aa10.16□□□□□ -0.78
DDX39A-220ENST00000593008 NPAS3Q8IXF0 933 aa10.16□□□□□ -0.78
DDX39A-220ENST00000593008 UBALD2Q8IYN6 164 aa10.16□□□□□ -0.78
DDX39A-220ENST00000593008 SLC44A3Q8N4M1 653 aa10.16□□□□□ -0.78
DDX39A-220ENST00000593008 SPPL2BQ8TCT7 592 aa10.16□□□□□ -0.78
DDX39A-220ENST00000593008 SLC35F5Q8WV83 523 aa10.16□□□□□ -0.78
DDX39A-220ENST00000593008 FGF14Q92915 247 aa10.16□□□□□ -0.78
DDX39A-220ENST00000593008 ARHGEF26Q96DR7 871 aa10.16□□□□□ -0.78
DDX39A-220ENST00000593008 IQCDQ96DY2 449 aa10.16□□□□□ -0.78
DDX39A-220ENST00000593008 FUBP3Q96I24 572 aaKnown RBP eCLIP10.16□□□□□ -0.78
DDX39A-220ENST00000593008 BAG1Q99933 345 aaPredicted RBP10.16□□□□□ -0.78
DDX39A-220ENST00000593008 KXD1Q9BQD3 176 aa10.16□□□□□ -0.78
DDX39A-220ENST00000593008 ULBP1Q9BZM6 244 aa10.16□□□□□ -0.78
DDX39A-220ENST00000593008 MIS12Q9H081 205 aa10.16□□□□□ -0.78
DDX39A-220ENST00000593008 FAM124BQ9H5Z6 455 aaPredicted RBP10.16□□□□□ -0.78
DDX39A-220ENST00000593008 CSNK1G1Q9HCP0 422 aa10.16□□□□□ -0.78
DDX39A-220ENST00000593008 ST7Q9NRC1 585 aa10.16□□□□□ -0.78
DDX39A-220ENST00000593008 HESX1Q9UBX0 185 aa10.16□□□□□ -0.78
DDX39A-220ENST00000593008 MAFFQ9ULX9 164 aa10.16□□□□□ -0.78
DDX39A-220ENST00000593008 MAGED2Q9UNF1 606 aaPredicted RBP10.16□□□□□ -0.78
DDX39A-220ENST00000593008 DENND4AQ7Z401 1863 aa10.16□□□□□ -0.78
DDX39A-220ENST00000593008 MYO16Q9Y6X6 1858 aa10.16□□□□□ -0.78
DDX39A-220ENST00000593008 DOCK6Q96HP0 2047 aa10.16□□□□□ -0.78
DDX39A-220ENST00000593008 MTCL1Q9Y4B5 1905 aaKnown RBP10.15□□□□□ -0.78
DDX39A-220ENST00000593008 TECTAO75443 2155 aa10.15□□□□□ -0.78
DDX39A-220ENST00000593008 ATP8B3O60423 1300 aa10.15□□□□□ -0.78
DDX39A-220ENST00000593008 RCCD1A6NED2 376 aa10.15□□□□□ -0.78
DDX39A-220ENST00000593008 ANHXE9PGG2 379 aa10.15□□□□□ -0.78
DDX39A-220ENST00000593008 GOLGA8SH3BPF8 625 aa10.15□□□□□ -0.78
DDX39A-220ENST00000593008 XPO1O14980 1071 aaKnown RBP10.15□□□□□ -0.78
DDX39A-220ENST00000593008 PAPSS1O43252 624 aaPredicted RBP10.15□□□□□ -0.78
DDX39A-220ENST00000593008 MED7O43513 233 aa10.15□□□□□ -0.78
DDX39A-220ENST00000593008 GRAP2O75791 330 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms