RNA–Protein interactions for RNA: ENST00000592643.5

H3F3B-212, Transcript of H3 histone family member 3B, humanhuman

TSL 3 BASIC

Gene H3F3B, Length 795 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-212ENST00000592643 CCSER2Q9H7U1 834 aa12.51□□□□□ -0.41
H3F3B-212ENST00000592643 TRPC7Q9HCX4 862 aa12.51□□□□□ -0.41
H3F3B-212ENST00000592643 PLCB1Q9NQ66 1216 aa12.51□□□□□ -0.41
H3F3B-212ENST00000592643 COL4A2P08572 1712 aa12.51□□□□□ -0.41
H3F3B-212ENST00000592643 PATJQ8NI35 1801 aa12.51□□□□□ -0.41
H3F3B-212ENST00000592643 SOBPA7XYQ1 873 aa12.5□□□□□ -0.41
H3F3B-212ENST00000592643 XPO1O14980 1071 aaKnown RBP12.5□□□□□ -0.41
H3F3B-212ENST00000592643 COCHO43405 550 aa12.5□□□□□ -0.41
H3F3B-212ENST00000592643 GREM1O60565 184 aa12.5□□□□□ -0.41
H3F3B-212ENST00000592643 KRT5P13647 590 aa12.5□□□□□ -0.41
H3F3B-212ENST00000592643 PSMC3P17980 439 aa12.5□□□□□ -0.41
H3F3B-212ENST00000592643 DDX6P26196 483 aaKnown RBP eCLIP12.5□□□□□ -0.412e-12■■■□□ 17.7
H3F3B-212ENST00000592643 GPD2P43304 727 aa12.5□□□□□ -0.41
H3F3B-212ENST00000592643 PLA2G4AP47712 749 aa12.5□□□□□ -0.41
H3F3B-212ENST00000592643 RPL34P49207 117 aaKnown RBP12.5□□□□□ -0.41
H3F3B-212ENST00000592643 MFAP3P55082 362 aa12.5□□□□□ -0.41
H3F3B-212ENST00000592643 JAM2P57087 298 aa12.5□□□□□ -0.41
H3F3B-212ENST00000592643 ZNF268Q14587 947 aaPredicted RBP12.5□□□□□ -0.41
H3F3B-212ENST00000592643 DRAP1Q14919 205 aaPredicted RBP12.5□□□□□ -0.41
H3F3B-212ENST00000592643 SYCP1Q15431 976 aa12.5□□□□□ -0.41
H3F3B-212ENST00000592643 ZNF77Q15935 545 aa12.5□□□□□ -0.41
H3F3B-212ENST00000592643 ARHGAP15Q53QZ3 475 aa12.5□□□□□ -0.41
H3F3B-212ENST00000592643 PM20D1Q6GTS8 502 aa12.5□□□□□ -0.41
H3F3B-212ENST00000592643 CCDC186Q7Z3E2 898 aa12.5□□□□□ -0.41
H3F3B-212ENST00000592643 SLC47A2Q86VL8 602 aa12.5□□□□□ -0.41
H3F3B-212ENST00000592643 ZNF606Q8WXB4 792 aa12.5□□□□□ -0.41
H3F3B-212ENST00000592643 OVCA2Q8WZ82 227 aa12.5□□□□□ -0.41
H3F3B-212ENST00000592643 DDX1Q92499 740 aaKnown RBP12.5□□□□□ -0.41
H3F3B-212ENST00000592643 SECISBP2LQ93073 1101 aaKnown RBP12.5□□□□□ -0.41
H3F3B-212ENST00000592643 FBXO32Q969P5 355 aa12.5□□□□□ -0.41
H3F3B-212ENST00000592643 GCNAQ96QF7 691 aa12.5□□□□□ -0.41
H3F3B-212ENST00000592643 RTN4Q9NQC3 1192 aaKnown RBP12.5□□□□□ -0.41
H3F3B-212ENST00000592643 TDP1Q9NUW8 608 aa12.5□□□□□ -0.41
H3F3B-212ENST00000592643 COMMD8Q9NX08 183 aa12.5□□□□□ -0.41
H3F3B-212ENST00000592643 OBP2AQ9NY56 170 aa12.5□□□□□ -0.41
H3F3B-212ENST00000592643 TRPM5Q9NZQ8 1165 aa12.5□□□□□ -0.41
H3F3B-212ENST00000592643 A0A1W2PQH9 124 aa12.49□□□□□ -0.41
H3F3B-212ENST00000592643 USP17L7P0C7H9 530 aa12.49□□□□□ -0.41
H3F3B-212ENST00000592643 HDCP19113 662 aa12.49□□□□□ -0.41
H3F3B-212ENST00000592643 BCAT1P54687 386 aa12.49□□□□□ -0.41
H3F3B-212ENST00000592643 SLC7A9P82251 487 aa12.49□□□□□ -0.41
H3F3B-212ENST00000592643 TNK2Q07912 1038 aa12.49□□□□□ -0.41
H3F3B-212ENST00000592643 BST2Q10589 180 aaKnown RBP12.49□□□□□ -0.41
H3F3B-212ENST00000592643 USP4Q13107 963 aa12.49□□□□□ -0.41
H3F3B-212ENST00000592643 CWF19L1Q69YN2 538 aaKnown RBP12.49□□□□□ -0.41
H3F3B-212ENST00000592643 BMP8AQ7Z5Y6 402 aa12.49□□□□□ -0.41
H3F3B-212ENST00000592643 ZNF687Q8N1G0 1237 aa12.49□□□□□ -0.41
H3F3B-212ENST00000592643 OLIG1Q8TAK6 271 aa12.49□□□□□ -0.41
H3F3B-212ENST00000592643 KCTD13Q8WZ19 329 aa12.49□□□□□ -0.41
H3F3B-212ENST00000592643 SLITRK1Q96PX8 696 aa12.49□□□□□ -0.41
H3F3B-212ENST00000592643 ERGIC2Q96RQ1 377 aa12.49□□□□□ -0.41
H3F3B-212ENST00000592643 FAM83CQ9BQN1 747 aa12.49□□□□□ -0.41
H3F3B-212ENST00000592643 TRMT61BQ9BVS5 477 aaKnown RBP12.49□□□□□ -0.41
H3F3B-212ENST00000592643 ULBP1Q9BZM6 244 aa12.49□□□□□ -0.41
H3F3B-212ENST00000592643 NAT10Q9H0A0 1025 aaKnown RBP12.49□□□□□ -0.41
H3F3B-212ENST00000592643 CYLDQ9NQC7 956 aa12.49□□□□□ -0.41
H3F3B-212ENST00000592643 HPS4Q9NQG7 708 aa12.49□□□□□ -0.41
H3F3B-212ENST00000592643 FAM207AQ9NSI2 230 aaPredicted RBP12.49□□□□□ -0.41
H3F3B-212ENST00000592643 WNT16Q9UBV4 365 aa12.49□□□□□ -0.41
H3F3B-212ENST00000592643 TJP2Q9UDY2 1190 aa12.49□□□□□ -0.41
H3F3B-212ENST00000592643 CA14Q9ULX7 337 aa12.49□□□□□ -0.41
H3F3B-212ENST00000592643 ARHGAP26Q9UNA1 814 aa12.49□□□□□ -0.41
H3F3B-212ENST00000592643 DMDP11532 3685 aa12.49□□□□□ -0.41
H3F3B-212ENST00000592643 DENND4CQ5VZ89 1909 aa12.49□□□□□ -0.41
H3F3B-212ENST00000592643 ANAPC1Q9H1A4 1944 aa12.49□□□□□ -0.41
H3F3B-212ENST00000592643 TRAV19A0A0A6YYK7 116 aa12.48□□□□□ -0.41
H3F3B-212ENST00000592643 A0A1B0GTH6 734 aa12.48□□□□□ -0.41
H3F3B-212ENST00000592643 F8VZ95 297 aa12.48□□□□□ -0.41
H3F3B-212ENST00000592643 M0QYV0 167 aa12.48□□□□□ -0.41
H3F3B-212ENST00000592643 PIK3R2O00459 728 aa12.48□□□□□ -0.41
H3F3B-212ENST00000592643 PES1O00541 588 aaKnown RBP12.48□□□□□ -0.41
H3F3B-212ENST00000592643 MDM4O15151 490 aa12.48□□□□□ -0.41
H3F3B-212ENST00000592643 PI15O43692 258 aa12.48□□□□□ -0.41
H3F3B-212ENST00000592643 SETSIPP0DME0 302 aa12.48□□□□□ -0.41
H3F3B-212ENST00000592643 TCF3P15923 654 aa12.48□□□□□ -0.41
H3F3B-212ENST00000592643 GNA15P30679 374 aa12.48□□□□□ -0.41
H3F3B-212ENST00000592643 GDI1P31150 447 aa12.48□□□□□ -0.41
H3F3B-212ENST00000592643 AVPR1AP37288 418 aa12.48□□□□□ -0.41
H3F3B-212ENST00000592643 PPP3CCP48454 512 aa12.48□□□□□ -0.41
H3F3B-212ENST00000592643 RGS7P49802 495 aa12.48□□□□□ -0.41
H3F3B-212ENST00000592643 TKTL1P51854 596 aa12.48□□□□□ -0.41
H3F3B-212ENST00000592643 TRIM68Q6AZZ1 485 aa12.48□□□□□ -0.41
H3F3B-212ENST00000592643 SIX5Q8N196 739 aa12.48□□□□□ -0.41
H3F3B-212ENST00000592643 CELF5Q8N6W0 485 aaKnown RBP12.48□□□□□ -0.41
H3F3B-212ENST00000592643 BPIFB1Q8TDL5 484 aa12.48□□□□□ -0.41
H3F3B-212ENST00000592643 SH3RF2Q8TEC5 729 aa12.48□□□□□ -0.41
H3F3B-212ENST00000592643 CLEC4CQ8WTT0 213 aa12.48□□□□□ -0.41
H3F3B-212ENST00000592643 DEPDC1BQ8WUY9 529 aa12.48□□□□□ -0.41
H3F3B-212ENST00000592643 P2RY11Q96G91 374 aa12.48□□□□□ -0.41
H3F3B-212ENST00000592643 DDX23Q9BUQ8 820 aaKnown RBP12.48□□□□□ -0.41
H3F3B-212ENST00000592643 STK33Q9BYT3 514 aa12.48□□□□□ -0.41
H3F3B-212ENST00000592643 LINC00597Q9H2U6 94 aa12.48□□□□□ -0.41
H3F3B-212ENST00000592643 FBXO44Q9H4M3 255 aa12.48□□□□□ -0.41
H3F3B-212ENST00000592643 HEBP1Q9NRV9 189 aa12.48□□□□□ -0.41
H3F3B-212ENST00000592643 GKN1Q9NS71 199 aa12.48□□□□□ -0.41
H3F3B-212ENST00000592643 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.48□□□□□ -0.41
H3F3B-212ENST00000592643 EHD2Q9NZN4 543 aa12.48□□□□□ -0.41
H3F3B-212ENST00000592643 NUDT5Q9UKK9 219 aa12.48□□□□□ -0.41
H3F3B-212ENST00000592643 CPQQ9Y646 472 aa12.48□□□□□ -0.41
H3F3B-212ENST00000592643 ZNF638Q14966 1978 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms