RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 VPS45Q9NRW7 570 aa23.11■■□□□ 1.29
DDX39A-215ENST00000590696 EXOC1Q9NV70 894 aa23.11■■□□□ 1.29
DDX39A-215ENST00000590696 DMAC2Q9NW81 257 aa23.11■■□□□ 1.29
DDX39A-215ENST00000590696 RCOR1Q9UKL0 485 aa23.11■■□□□ 1.29
DDX39A-215ENST00000590696 ACTN4O43707 911 aaKnown RBP23.1■■□□□ 1.29
DDX39A-215ENST00000590696 VNN1O95497 513 aa23.1■■□□□ 1.29
DDX39A-215ENST00000590696 GBP1P32455 592 aa23.1■■□□□ 1.29
DDX39A-215ENST00000590696 STPG1Q5TH74 334 aa23.1■■□□□ 1.29
DDX39A-215ENST00000590696 SCAMP5Q8TAC9 235 aa23.1■■□□□ 1.29
DDX39A-215ENST00000590696 PAGE5Q96GU1 130 aa23.1■■□□□ 1.29
DDX39A-215ENST00000590696 PNKPQ96T60 521 aa23.1■■□□□ 1.29
DDX39A-215ENST00000590696 MMP17Q9ULZ9 603 aa23.1■■□□□ 1.29
DDX39A-215ENST00000590696 TNFRSF10BO14763 440 aa23.09■■□□□ 1.29
DDX39A-215ENST00000590696 TM4SF5O14894 197 aa23.09■■□□□ 1.29
DDX39A-215ENST00000590696 COCHO43405 550 aa23.09■■□□□ 1.29
DDX39A-215ENST00000590696 SLC5A3P53794 718 aa23.09■■□□□ 1.29
DDX39A-215ENST00000590696 DLG4P78352 724 aa23.09■■□□□ 1.29
DDX39A-215ENST00000590696 MRPS21P82921 87 aaKnown RBP23.09■■□□□ 1.29
DDX39A-215ENST00000590696 CREB5Q02930 508 aa23.09■■□□□ 1.29
DDX39A-215ENST00000590696 MESP2Q0VG99 397 aa23.09■■□□□ 1.29
DDX39A-215ENST00000590696 KMT5BQ4FZB7 885 aa23.09■■□□□ 1.29
DDX39A-215ENST00000590696 USP39Q53GS9 565 aaKnown RBP23.09■■□□□ 1.29
DDX39A-215ENST00000590696 ANO7Q6IWH7 933 aa23.09■■□□□ 1.29
DDX39A-215ENST00000590696 SLC9A9Q8IVB4 645 aa23.09■■□□□ 1.29
DDX39A-215ENST00000590696 SPRYD3Q8NCJ5 442 aa23.09■■□□□ 1.29
DDX39A-215ENST00000590696 DMAP1Q9NPF5 467 aaPredicted RBP23.09■■□□□ 1.29
DDX39A-215ENST00000590696 TBC1D14Q9P2M4 693 aa23.09■■□□□ 1.29
DDX39A-215ENST00000590696 E2F8A0AVK6 867 aa23.08■■□□□ 1.29
DDX39A-215ENST00000590696 ADH1CP00326 375 aa23.08■■□□□ 1.29
DDX39A-215ENST00000590696 EIF2DP41214 584 aaKnown RBP23.08■■□□□ 1.29
DDX39A-215ENST00000590696 CRY1Q16526 586 aa23.08■■□□□ 1.29
DDX39A-215ENST00000590696 HECTD3Q5T447 861 aa23.08■■□□□ 1.29
DDX39A-215ENST00000590696 TCEAL6Q6IPX3 200 aa23.08■■□□□ 1.29
DDX39A-215ENST00000590696 ACOT1Q86TX2 421 aa23.08■■□□□ 1.29
DDX39A-215ENST00000590696 RASSF3Q86WH2 238 aa23.08■■□□□ 1.29
DDX39A-215ENST00000590696 C12orf40Q86WS4 652 aa23.08■■□□□ 1.29
DDX39A-215ENST00000590696 SFTPA1Q8IWL2 248 aa23.08■■□□□ 1.29
DDX39A-215ENST00000590696 TCEAL3Q969E4 200 aa23.08■■□□□ 1.29
DDX39A-215ENST00000590696 SMARCD1Q96GM5 515 aa23.08■■□□□ 1.29
DDX39A-215ENST00000590696 ZFRQ96KR1 1074 aaKnown RBP23.08■■□□□ 1.29
DDX39A-215ENST00000590696 KCTD10Q9H3F6 313 aa23.08■■□□□ 1.29
DDX39A-215ENST00000590696 CCSER2Q9H7U1 834 aa23.08■■□□□ 1.29
DDX39A-215ENST00000590696 IL37Q9NZH6 218 aa23.08■■□□□ 1.29
DDX39A-215ENST00000590696 BCLAF3A2AJT9 711 aaKnown RBP23.07■■□□□ 1.28
DDX39A-215ENST00000590696 AP1G2O75843 785 aa23.07■■□□□ 1.28
DDX39A-215ENST00000590696 KAT7O95251 611 aa23.07■■□□□ 1.28
DDX39A-215ENST00000590696 CAVIN2O95810 425 aa23.07■■□□□ 1.28
DDX39A-215ENST00000590696 APODP05090 189 aa23.07■■□□□ 1.28
DDX39A-215ENST00000590696 ADH5P11766 374 aa23.07■■□□□ 1.28
DDX39A-215ENST00000590696 TIE1P35590 1138 aa23.07■■□□□ 1.28
DDX39A-215ENST00000590696 SGSM1Q2NKQ1 1148 aa23.07■■□□□ 1.28
DDX39A-215ENST00000590696 SNX30Q5VWJ9 437 aa23.07■■□□□ 1.28
DDX39A-215ENST00000590696 TMEM92Q6UXU6 159 aa23.07■■□□□ 1.28
DDX39A-215ENST00000590696 TTC30AQ86WT1 665 aa23.07■■□□□ 1.28
DDX39A-215ENST00000590696 FUKQ8N0W3 1084 aa23.07■■□□□ 1.28
DDX39A-215ENST00000590696 ALLCQ8N6M5 410 aa23.07■■□□□ 1.28
DDX39A-215ENST00000590696 TMEM174Q8WUU8 243 aa23.07■■□□□ 1.28
DDX39A-215ENST00000590696 CNOT6LQ96LI5 555 aaKnown RBP23.07■■□□□ 1.28
DDX39A-215ENST00000590696 KRT82Q9NSB4 513 aa23.07■■□□□ 1.28
DDX39A-215ENST00000590696 A0A1B0GVL5 298 aa23.06■■□□□ 1.28
DDX39A-215ENST00000590696 PDXKO00764 312 aa23.06■■□□□ 1.28
DDX39A-215ENST00000590696 KLF8O95600 359 aaPredicted RBP23.06■■□□□ 1.28
DDX39A-215ENST00000590696 NR3C1P04150 777 aa23.06■■□□□ 1.28
DDX39A-215ENST00000590696 P4HA1P13674 534 aa23.06■■□□□ 1.28
DDX39A-215ENST00000590696 CCDC130P13994 396 aa23.06■■□□□ 1.28
DDX39A-215ENST00000590696 KDSRQ06136 332 aa23.06■■□□□ 1.28
DDX39A-215ENST00000590696 ORC1Q13415 861 aa23.06■■□□□ 1.28
DDX39A-215ENST00000590696 ZACNQ401N2 412 aa23.06■■□□□ 1.28
DDX39A-215ENST00000590696 LY6G5CQ5SRR4 150 aa23.06■■□□□ 1.28
DDX39A-215ENST00000590696 EMC10Q5UCC4 262 aa23.06■■□□□ 1.28
DDX39A-215ENST00000590696 PMS2CLQ68D20 193 aa23.06■■□□□ 1.28
DDX39A-215ENST00000590696 RNF43Q68DV7 783 aa23.06■■□□□ 1.28
DDX39A-215ENST00000590696 C11orf74Q86VG3 221 aa23.06■■□□□ 1.28
DDX39A-215ENST00000590696 IL17RCQ8NAC3 791 aa23.06■■□□□ 1.28
DDX39A-215ENST00000590696 TXNDC5Q8NBS9 432 aaKnown RBP23.06■■□□□ 1.28
DDX39A-215ENST00000590696 MDGA1Q8NFP4 955 aa23.06■■□□□ 1.28
DDX39A-215ENST00000590696 OTUB2Q96DC9 234 aa23.06■■□□□ 1.28
DDX39A-215ENST00000590696 SMOQ99835 787 aa23.06■■□□□ 1.28
DDX39A-215ENST00000590696 ARHGEF4Q9NR80 690 aa23.06■■□□□ 1.28
DDX39A-215ENST00000590696 COMMD8Q9NX08 183 aa23.06■■□□□ 1.28
DDX39A-215ENST00000590696 GMIPQ9P107 970 aa23.06■■□□□ 1.28
DDX39A-215ENST00000590696 SH3BP1Q9Y3L3 701 aa23.06■■□□□ 1.28
DDX39A-215ENST00000590696 A0A0A0MRY4 1105 aa23.05■■□□□ 1.28
DDX39A-215ENST00000590696 FAM92AA1XBS5 289 aa23.05■■□□□ 1.28
DDX39A-215ENST00000590696 BEST1O76090 585 aa23.05■■□□□ 1.28
DDX39A-215ENST00000590696 RPN1P04843 607 aaKnown RBP23.05■■□□□ 1.28
DDX39A-215ENST00000590696 ZDHHC11BP0C7U3 371 aa23.05■■□□□ 1.28
DDX39A-215ENST00000590696 HNRNPLP14866 589 aaKnown RBP eCLIP23.05■■□□□ 1.28
DDX39A-215ENST00000590696 PFKFB1P16118 471 aa23.05■■□□□ 1.28
DDX39A-215ENST00000590696 GRIA2P42262 883 aa23.05■■□□□ 1.28
DDX39A-215ENST00000590696 NDST1P52848 882 aa23.05■■□□□ 1.28
DDX39A-215ENST00000590696 GAD2Q05329 585 aa23.05■■□□□ 1.28
DDX39A-215ENST00000590696 SV2AQ7L0J3 742 aa23.05■■□□□ 1.28
DDX39A-215ENST00000590696 CRYBG2Q8N1P7 616 aa23.05■■□□□ 1.28
DDX39A-215ENST00000590696 ZMIZ2Q8NF64 920 aa23.05■■□□□ 1.28
DDX39A-215ENST00000590696 SLC2A14Q8TDB8 520 aa23.05■■□□□ 1.28
DDX39A-215ENST00000590696 TMC2Q8TDI7 906 aa23.05■■□□□ 1.28
DDX39A-215ENST00000590696 HMGXB4Q9UGU5 601 aa23.05■■□□□ 1.28
DDX39A-215ENST00000590696 MYOFQ9NZM1 2061 aa23.04■■□□□ 1.28
DDX39A-215ENST00000590696 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 160 ms