RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 IGDCC3Q8IVU1 814 aa15.78■□□□□ 0.12
CIRBP-228ENST00000590347 CENPSQ8N2Z9 138 aa15.78■□□□□ 0.12
CIRBP-228ENST00000590347 FAM156AQ8NDB6 213 aa15.78■□□□□ 0.12
CIRBP-228ENST00000590347 ZSCAN18Q8TBC5 510 aaPredicted RBP15.78■□□□□ 0.12
CIRBP-228ENST00000590347 WRNIP1Q96S55 665 aa15.78■□□□□ 0.12
CIRBP-228ENST00000590347 PI4K2AQ9BTU6 479 aa15.78■□□□□ 0.12
CIRBP-228ENST00000590347 MRPS26Q9BYN8 205 aaKnown RBP15.78■□□□□ 0.12
CIRBP-228ENST00000590347 DRC3Q9H069 523 aa15.78■□□□□ 0.12
CIRBP-228ENST00000590347 SIAEQ9HAT2 523 aa15.78■□□□□ 0.12
CIRBP-228ENST00000590347 PCDHAC2Q9Y5I4 1007 aa15.78■□□□□ 0.12
CIRBP-228ENST00000590347 COL5A3P25940 1745 aaPredicted RBP15.78■□□□□ 0.12
CIRBP-228ENST00000590347 POLRMTO00411 1230 aaKnown RBP15.78■□□□□ 0.12
CIRBP-228ENST00000590347 DNALI1O14645 258 aaPredicted RBP15.78■□□□□ 0.12
CIRBP-228ENST00000590347 AVILO75366 819 aa15.78■□□□□ 0.12
CIRBP-228ENST00000590347 FAM58BPP0C7Q3 252 aa15.78■□□□□ 0.12
CIRBP-228ENST00000590347 CD247P20963 164 aa15.78■□□□□ 0.12
CIRBP-228ENST00000590347 DLGAP5Q15398 846 aa15.78■□□□□ 0.12
CIRBP-228ENST00000590347 LDLRAP1Q5SW96 308 aa15.78■□□□□ 0.12
CIRBP-228ENST00000590347 TPH2Q8IWU9 490 aa15.78■□□□□ 0.12
CIRBP-228ENST00000590347 HELQQ8TDG4 1101 aa15.78■□□□□ 0.12
CIRBP-228ENST00000590347 COX4I2Q96KJ9 171 aa15.78■□□□□ 0.12
CIRBP-228ENST00000590347 CCDC106Q9BWC9 280 aa15.78■□□□□ 0.12
CIRBP-228ENST00000590347 SENP1Q9P0U3 644 aa15.78■□□□□ 0.12
CIRBP-228ENST00000590347 FAM32AQ9Y421 112 aaKnown RBP15.78■□□□□ 0.12
CIRBP-228ENST00000590347 UGT1A9O60656 530 aa15.77■□□□□ 0.12
CIRBP-228ENST00000590347 SEC24DO94855 1032 aaPredicted RBP15.77■□□□□ 0.12
CIRBP-228ENST00000590347 TNFAIP8O95379 198 aa15.77■□□□□ 0.12
CIRBP-228ENST00000590347 NDST2P52849 883 aa15.77■□□□□ 0.12
CIRBP-228ENST00000590347 HIF1AQ16665 826 aa15.77■□□□□ 0.12
CIRBP-228ENST00000590347 SPDYAQ5MJ70 313 aa15.77■□□□□ 0.12
CIRBP-228ENST00000590347 CENPUQ71F23 418 aa15.77■□□□□ 0.12
CIRBP-228ENST00000590347 LRRC43Q8N309 656 aa15.77■□□□□ 0.12
CIRBP-228ENST00000590347 RSPH1Q8WYR4 309 aa15.77■□□□□ 0.12
CIRBP-228ENST00000590347 KREMEN1Q96MU8 473 aa15.77■□□□□ 0.12
CIRBP-228ENST00000590347 DBNDD1Q9H9R9 158 aa15.77■□□□□ 0.12
CIRBP-228ENST00000590347 UGT1A7Q9HAW7 530 aa15.77■□□□□ 0.12
CIRBP-228ENST00000590347 UGT1A10Q9HAW8 530 aa15.77■□□□□ 0.12
CIRBP-228ENST00000590347 UGT1A8Q9HAW9 530 aa15.77■□□□□ 0.12
CIRBP-228ENST00000590347 IKBKGQ9Y6K9 419 aa15.77■□□□□ 0.12
CIRBP-228ENST00000590347 CACNA1SQ13698 1873 aa15.77■□□□□ 0.12
CIRBP-228ENST00000590347 EIF3FO00303 357 aaPredicted RBP15.77■□□□□ 0.11
CIRBP-228ENST00000590347 MMP10P09238 476 aa15.77■□□□□ 0.11
CIRBP-228ENST00000590347 PTPN1P18031 435 aaKnown RBP15.77■□□□□ 0.11
CIRBP-228ENST00000590347 CTBSQ01459 385 aa15.77■□□□□ 0.11
CIRBP-228ENST00000590347 TSPAN14Q8NG11 270 aa15.77■□□□□ 0.11
CIRBP-228ENST00000590347 PPP1R14CQ8TAE6 165 aa15.77■□□□□ 0.11
CIRBP-228ENST00000590347 LRRN4Q8WUT4 740 aa15.77■□□□□ 0.11
CIRBP-228ENST00000590347 LRGUKQ96M69 825 aa15.77■□□□□ 0.11
CIRBP-228ENST00000590347 HNRNPABQ99729 332 aaKnown RBP15.77■□□□□ 0.11
CIRBP-228ENST00000590347 EPB41L1Q9H4G0 881 aa15.77■□□□□ 0.11
CIRBP-228ENST00000590347 PLGRKTQ9HBL7 147 aa15.77■□□□□ 0.11
CIRBP-228ENST00000590347 SPO11Q9Y5K1 396 aa15.77■□□□□ 0.11
CIRBP-228ENST00000590347 IRS2Q9Y4H2 1338 aa15.77■□□□□ 0.11
CIRBP-228ENST00000590347 COPEO14579 308 aa15.77■□□□□ 0.11
CIRBP-228ENST00000590347 ALDH2P05091 517 aa15.77■□□□□ 0.11
CIRBP-228ENST00000590347 CFHP08603 1231 aa15.77■□□□□ 0.11
CIRBP-228ENST00000590347 SPATA31C1P0DKV0 1188 aa15.77■□□□□ 0.11
CIRBP-228ENST00000590347 BCAP31P51572 246 aa15.77■□□□□ 0.11
CIRBP-228ENST00000590347 EGFLAMQ63HQ2 1017 aa15.77■□□□□ 0.11
CIRBP-228ENST00000590347 C16orf46Q6P387 395 aa15.77■□□□□ 0.11
CIRBP-228ENST00000590347 PHTF2Q8N3S3 785 aa15.77■□□□□ 0.11
CIRBP-228ENST00000590347 PPM1NQ8N819 430 aa15.77■□□□□ 0.11
CIRBP-228ENST00000590347 ADAM32Q8TC27 787 aa15.77■□□□□ 0.11
CIRBP-228ENST00000590347 PLEKHO2Q8TD55 490 aa15.77■□□□□ 0.11
CIRBP-228ENST00000590347 TOPORSQ9NS56 1045 aaPredicted RBP15.77■□□□□ 0.11
CIRBP-228ENST00000590347 TNRC6CQ9HCJ0 1690 aaKnown RBP15.76■□□□□ 0.11
CIRBP-228ENST00000590347 KDM3AQ9Y4C1 1321 aa15.76■□□□□ 0.11
CIRBP-228ENST00000590347 TRIM49D1C9J1S8 452 aa15.76■□□□□ 0.11
CIRBP-228ENST00000590347 ABHD2P08910 425 aa15.76■□□□□ 0.11
CIRBP-228ENST00000590347 TCEA1P23193 301 aaKnown RBP15.76■□□□□ 0.11
CIRBP-228ENST00000590347 SMARCA1P28370 1054 aa15.76■□□□□ 0.11
CIRBP-228ENST00000590347 BNIP3Q12983 259 aa15.76■□□□□ 0.11
CIRBP-228ENST00000590347 PDCD4Q53EL6 469 aaKnown RBP15.76■□□□□ 0.11
CIRBP-228ENST00000590347 NANOGP8Q6NSW7 305 aa15.76■□□□□ 0.11
CIRBP-228ENST00000590347 TRIM72Q6ZMU5 477 aa15.76■□□□□ 0.11
CIRBP-228ENST00000590347 FRMD7Q6ZUT3 714 aa15.76■□□□□ 0.11
CIRBP-228ENST00000590347 DCAKDQ8WVC6 231 aa15.76■□□□□ 0.11
CIRBP-228ENST00000590347 SLCO2A1Q92959 643 aa15.76■□□□□ 0.11
CIRBP-228ENST00000590347 CFAP36Q96G28 342 aa15.76■□□□□ 0.11
CIRBP-228ENST00000590347 C11orf70Q9BRQ4 267 aa15.76■□□□□ 0.11
CIRBP-228ENST00000590347 OSBPL6Q9BZF3 934 aa15.76■□□□□ 0.11
CIRBP-228ENST00000590347 AGPAT3Q9NRZ7 376 aa15.76■□□□□ 0.11
CIRBP-228ENST00000590347 NOCTQ9UK39 431 aaKnown RBP15.76■□□□□ 0.11
CIRBP-228ENST00000590347 USP17L10C9JJH3 530 aa15.76■□□□□ 0.11
CIRBP-228ENST00000590347 AIM2O14862 343 aa15.76■□□□□ 0.11
CIRBP-228ENST00000590347 GDF10P55107 478 aa15.76■□□□□ 0.11
CIRBP-228ENST00000590347 GNA12Q03113 381 aa15.76■□□□□ 0.11
CIRBP-228ENST00000590347 CCNG2Q16589 344 aa15.76■□□□□ 0.11
CIRBP-228ENST00000590347 ABCB5Q2M3G0 1257 aa15.76■□□□□ 0.11
CIRBP-228ENST00000590347 SIX5Q8N196 739 aa15.76■□□□□ 0.11
CIRBP-228ENST00000590347 PQLC1Q8N2U9 271 aa15.76■□□□□ 0.11
CIRBP-228ENST00000590347 LMO3Q8TAP4 145 aa15.76■□□□□ 0.11
CIRBP-228ENST00000590347 E2F7Q96AV8 911 aa15.76■□□□□ 0.11
CIRBP-228ENST00000590347 THAP11Q96EK4 314 aa15.76■□□□□ 0.11
CIRBP-228ENST00000590347 SNX27Q96L92 541 aa15.76■□□□□ 0.11
CIRBP-228ENST00000590347 NOX1Q9Y5S8 564 aa15.76■□□□□ 0.11
CIRBP-228ENST00000590347 ONECUT3O60422 494 aaPredicted RBP15.75■□□□□ 0.11
CIRBP-228ENST00000590347 SLITRK3O94933 977 aa15.75■□□□□ 0.11
CIRBP-228ENST00000590347 PCP11498 1178 aaKnown RBP15.75■□□□□ 0.11
CIRBP-228ENST00000590347 P4HA1P13674 534 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms