RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	EHD2	Q9NZN4	543 aa		18.29	■□□□□ 0.52
MBD1-221	ENST00000589867	AJAP1	Q9UKB5	411 aa	Predicted RBP	18.29	■□□□□ 0.52
MBD1-221	ENST00000589867	SCML2	Q9UQR0	700 aa		18.29	■□□□□ 0.52
MBD1-221	ENST00000589867	USP3	Q9Y6I4	520 aa		18.29	■□□□□ 0.52
MBD1-221	ENST00000589867	PIAS3	Q9Y6X2	628 aa		18.29	■□□□□ 0.52
MBD1-221	ENST00000589867	CYP26A1	O43174	497 aa		18.28	■□□□□ 0.52
MBD1-221	ENST00000589867	COCH	O43405	550 aa		18.28	■□□□□ 0.52
MBD1-221	ENST00000589867	GALR2	O43603	387 aa	Predicted RBP	18.28	■□□□□ 0.52
MBD1-221	ENST00000589867	ARSA	P15289	507 aa		18.28	■□□□□ 0.52
MBD1-221	ENST00000589867	MLLT6	P55198	1093 aa	Predicted RBP	18.28	■□□□□ 0.52
MBD1-221	ENST00000589867	MTF1	Q14872	753 aa		18.28	■□□□□ 0.52
MBD1-221	ENST00000589867	RAB41	Q5JT25	222 aa		18.28	■□□□□ 0.52
MBD1-221	ENST00000589867	TRIM65	Q6PJ69	517 aa		18.28	■□□□□ 0.52
MBD1-221	ENST00000589867	TMEM270	Q6UE05	265 aa		18.28	■□□□□ 0.52
MBD1-221	ENST00000589867	BHLHA9	Q7RTU4	235 aa		18.28	■□□□□ 0.52
MBD1-221	ENST00000589867	ANKRD52	Q8NB46	1076 aa		18.28	■□□□□ 0.52
MBD1-221	ENST00000589867	ENOX1	Q8TC92	643 aa	Known RBP	18.28	■□□□□ 0.52
MBD1-221	ENST00000589867	WBP2	Q969T9	261 aa		18.28	■□□□□ 0.52
MBD1-221	ENST00000589867	CCSER2	Q9H7U1	834 aa		18.28	■□□□□ 0.52
MBD1-221	ENST00000589867	TSPAN16	Q9UKR8	245 aa		18.28	■□□□□ 0.52
MBD1-221	ENST00000589867	SIT1	Q9Y3P8	196 aa		18.28	■□□□□ 0.52
MBD1-221	ENST00000589867	PCDHB4	Q9Y5E5	795 aa		18.28	■□□□□ 0.52
MBD1-221	ENST00000589867	PIEZO1	Q92508	2521 aa		18.27	■□□□□ 0.52
MBD1-221	ENST00000589867	GTPBP10	A4D1E9	387 aa	Known RBP	18.27	■□□□□ 0.52
MBD1-221	ENST00000589867	FAM170B	A6NMN3	283 aa		18.27	■□□□□ 0.52
MBD1-221	ENST00000589867	LEFTY2	O00292	366 aa		18.27	■□□□□ 0.52
MBD1-221	ENST00000589867	MBD3	O95983	291 aa		18.27	■□□□□ 0.52
MBD1-221	ENST00000589867	ABL1	P00519	1130 aa		18.27	■□□□□ 0.52
MBD1-221	ENST00000589867	PON1	P27169	355 aa		18.27	■□□□□ 0.52
MBD1-221	ENST00000589867	NUBP1	P53384	320 aa		18.27	■□□□□ 0.52
MBD1-221	ENST00000589867	PLCB2	Q00722	1185 aa		18.27	■□□□□ 0.52
MBD1-221	ENST00000589867	PDE4C	Q08493	712 aa		18.27	■□□□□ 0.52
MBD1-221	ENST00000589867	GOLGA7B	Q2TAP0	167 aa		18.27	■□□□□ 0.52
MBD1-221	ENST00000589867	PIGZ	Q86VD9	579 aa		18.27	■□□□□ 0.52
MBD1-221	ENST00000589867	CREBRF	Q8IUR6	639 aa		18.27	■□□□□ 0.52
MBD1-221	ENST00000589867	DTWD2	Q8NBA8	298 aa		18.27	■□□□□ 0.52
MBD1-221	ENST00000589867	PDZD8	Q8NEN9	1154 aa		18.27	■□□□□ 0.52
MBD1-221	ENST00000589867	CLDN23	Q96B33	292 aa		18.27	■□□□□ 0.52
MBD1-221	ENST00000589867	OSBPL6	Q9BZF3	934 aa		18.27	■□□□□ 0.52
MBD1-221	ENST00000589867	UBXN6	Q9BZV1	441 aa		18.27	■□□□□ 0.52
MBD1-221	ENST00000589867	LINC00597	Q9H2U6	94 aa		18.27	■□□□□ 0.52
MBD1-221	ENST00000589867	EBF3	Q9H4W6	596 aa		18.27	■□□□□ 0.52
MBD1-221	ENST00000589867	DACH1	Q9UI36	760 aa		18.27	■□□□□ 0.52
MBD1-221	ENST00000589867	CPQ	Q9Y646	472 aa		18.27	■□□□□ 0.52
MBD1-221	ENST00000589867	WNT6	Q9Y6F9	365 aa		18.27	■□□□□ 0.52
MBD1-221	ENST00000589867	BECN2	A8MW95	431 aa		18.26	■□□□□ 0.51
MBD1-221	ENST00000589867	STK25	O00506	426 aa		18.26	■□□□□ 0.51
MBD1-221	ENST00000589867	TBX18	O95935	607 aa		18.26	■□□□□ 0.51
MBD1-221	ENST00000589867	PAEP	P09466	180 aa		18.26	■□□□□ 0.51
MBD1-221	ENST00000589867	VDR	P11473	427 aa		18.26	■□□□□ 0.51
MBD1-221	ENST00000589867	BRD2	P25440	801 aa	Known RBP	18.26	■□□□□ 0.51
MBD1-221	ENST00000589867	CTH	P32929	405 aa		18.26	■□□□□ 0.51
MBD1-221	ENST00000589867	MTIF2	P46199	727 aa	Known RBP	18.26	■□□□□ 0.51
MBD1-221	ENST00000589867	TUB	P50607	506 aa		18.26	■□□□□ 0.51
MBD1-221	ENST00000589867	YWHAE	P62258	255 aa	Known RBP	18.26	■□□□□ 0.51
MBD1-221	ENST00000589867	KCNMA1	Q12791	1236 aa		18.26	■□□□□ 0.51
MBD1-221	ENST00000589867	CETN1	Q12798	172 aa		18.26	■□□□□ 0.51
MBD1-221	ENST00000589867	UBXN2B	Q14CS0	331 aa		18.26	■□□□□ 0.51
MBD1-221	ENST00000589867	MAN2A1	Q16706	1144 aa		18.26	■□□□□ 0.51
MBD1-221	ENST00000589867	EML3	Q32P44	896 aa		18.26	■□□□□ 0.51
MBD1-221	ENST00000589867	SGO2	Q562F6	1265 aa		18.26	■□□□□ 0.51
MBD1-221	ENST00000589867	CCDC183	Q5T5S1	534 aa		18.26	■□□□□ 0.51
MBD1-221	ENST00000589867	CDKAL1	Q5VV42	579 aa		18.26	■□□□□ 0.51
MBD1-221	ENST00000589867	NAIF1	Q69YI7	327 aa	Predicted RBP	18.26	■□□□□ 0.51
MBD1-221	ENST00000589867	ZNF852	Q6ZMS4	543 aa		18.26	■□□□□ 0.51
MBD1-221	ENST00000589867	RBBP8NL	Q8NC74	664 aa	Predicted RBP	18.26	■□□□□ 0.51
MBD1-221	ENST00000589867	UBA3	Q8TBC4	463 aa		18.26	■□□□□ 0.51
MBD1-221	ENST00000589867	HSD3B7	Q9H2F3	369 aa		18.26	■□□□□ 0.51
MBD1-221	ENST00000589867	FBXO44	Q9H4M3	255 aa		18.26	■□□□□ 0.51
MBD1-221	ENST00000589867	UBE2T	Q9NPD8	197 aa	Predicted RBP	18.26	■□□□□ 0.51
MBD1-221	ENST00000589867	SMPD4	Q9NXE4	827 aa		18.26	■□□□□ 0.51
MBD1-221	ENST00000589867	NFE2L3	Q9Y4A8	694 aa		18.26	■□□□□ 0.51
MBD1-221	ENST00000589867		A0A1W2PQH9	124 aa		18.25	■□□□□ 0.51
MBD1-221	ENST00000589867	SPECC1L-ADORA2A	F8WAN1	911 aa		18.25	■□□□□ 0.51
MBD1-221	ENST00000589867	GREM1	O60565	184 aa		18.25	■□□□□ 0.51
MBD1-221	ENST00000589867	CD19	P15391	556 aa		18.25	■□□□□ 0.51
MBD1-221	ENST00000589867	NHLH1	Q02575	133 aa		18.25	■□□□□ 0.51
MBD1-221	ENST00000589867	RUNX3	Q13761	415 aa		18.25	■□□□□ 0.51
MBD1-221	ENST00000589867	NCAPH	Q15003	741 aa		18.25	■□□□□ 0.51
MBD1-221	ENST00000589867	TPD52L1	Q16890	204 aa	Predicted RBP	18.25	■□□□□ 0.51
MBD1-221	ENST00000589867	GAB4	Q2WGN9	574 aa		18.25	■□□□□ 0.51
MBD1-221	ENST00000589867	VWA3B	Q502W6	1294 aa		18.25	■□□□□ 0.51
MBD1-221	ENST00000589867	HECTD3	Q5T447	861 aa		18.25	■□□□□ 0.51
MBD1-221	ENST00000589867	LCLAT1	Q6UWP7	414 aa		18.25	■□□□□ 0.51
MBD1-221	ENST00000589867	GBP6	Q6ZN66	633 aa		18.25	■□□□□ 0.51
MBD1-221	ENST00000589867	CCDC186	Q7Z3E2	898 aa		18.25	■□□□□ 0.51
MBD1-221	ENST00000589867	MAML2	Q8IZL2	1156 aa	Predicted RBP	18.25	■□□□□ 0.51
MBD1-221	ENST00000589867	OSCP1	Q8WVF1	389 aa		18.25	■□□□□ 0.51
MBD1-221	ENST00000589867	NDRG1	Q92597	394 aa	Known RBP	18.25	■□□□□ 0.51
MBD1-221	ENST00000589867	TUBGCP2	Q9BSJ2	902 aa		18.25	■□□□□ 0.51
MBD1-221	ENST00000589867	NDST4	Q9H3R1	872 aa		18.25	■□□□□ 0.51
MBD1-221	ENST00000589867	C8orf33	Q9H7E9	229 aa	Predicted RBP	18.25	■□□□□ 0.51
MBD1-221	ENST00000589867	ACP6	Q9NPH0	428 aa		18.25	■□□□□ 0.51
MBD1-221	ENST00000589867	CYLD	Q9NQC7	956 aa		18.25	■□□□□ 0.51
MBD1-221	ENST00000589867	THG1L	Q9NWX6	298 aa	Known RBP	18.25	■□□□□ 0.51
MBD1-221	ENST00000589867	ATG2B	Q96BY7	2078 aa		18.25	■□□□□ 0.51
MBD1-221	ENST00000589867	KCNJ18	B7U540	433 aa		18.24	■□□□□ 0.51
MBD1-221	ENST00000589867	MAN2B1	O00754	1011 aa		18.24	■□□□□ 0.51
MBD1-221	ENST00000589867	SCAMP3	O14828	347 aa	Known RBP	18.24	■□□□□ 0.51
MBD1-221	ENST00000589867	XPO1	O14980	1071 aa	Known RBP	18.24	■□□□□ 0.51

Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms