RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 MYL4P12829 197 aa14.33□□□□□ -0.12
VMP1-210ENST00000589823 GABRR2P28476 465 aa14.33□□□□□ -0.12
VMP1-210ENST00000589823 CDC25CP30307 473 aa14.33□□□□□ -0.12
VMP1-210ENST00000589823 CYLC1P35663 651 aaPredicted RBP14.33□□□□□ -0.12
VMP1-210ENST00000589823 MTHFRP42898 656 aa14.33□□□□□ -0.12
VMP1-210ENST00000589823 PPP3CCP48454 512 aa14.33□□□□□ -0.12
VMP1-210ENST00000589823 RPL34P49207 117 aaKnown RBP14.33□□□□□ -0.12
VMP1-210ENST00000589823 CENPCQ03188 943 aa14.33□□□□□ -0.12
VMP1-210ENST00000589823 TAF10Q12962 218 aa14.33□□□□□ -0.12
VMP1-210ENST00000589823 SLC18A3Q16572 532 aa14.33□□□□□ -0.12
VMP1-210ENST00000589823 TMC8Q8IU68 726 aa14.33□□□□□ -0.12
VMP1-210ENST00000589823 TMTC1Q8IUR5 882 aa14.33□□□□□ -0.12
VMP1-210ENST00000589823 CCDC170Q8IYT3 715 aa14.33□□□□□ -0.12
VMP1-210ENST00000589823 SMRP1Q8NCR6 262 aa14.33□□□□□ -0.12
VMP1-210ENST00000589823 SLC30A5Q8TAD4 765 aa14.33□□□□□ -0.12
VMP1-210ENST00000589823 OVCA2Q8WZ82 227 aa14.33□□□□□ -0.12
VMP1-210ENST00000589823 C18orf8Q96DM3 657 aa14.33□□□□□ -0.12
VMP1-210ENST00000589823 BAG1Q99933 345 aaPredicted RBP14.33□□□□□ -0.12
VMP1-210ENST00000589823 ZNF334Q9HCZ1 680 aaPredicted RBP14.33□□□□□ -0.12
VMP1-210ENST00000589823 TRPM5Q9NZQ8 1165 aa14.33□□□□□ -0.12
VMP1-210ENST00000589823 USP3Q9Y6I4 520 aa14.33□□□□□ -0.12
VMP1-210ENST00000589823 A0A087X0T9 212 aa14.32□□□□□ -0.12
VMP1-210ENST00000589823 FAM92AA1XBS5 289 aa14.32□□□□□ -0.12
VMP1-210ENST00000589823 RTN2O75298 545 aa14.32□□□□□ -0.12
VMP1-210ENST00000589823 CALB1P05937 261 aa14.32□□□□□ -0.12
VMP1-210ENST00000589823 FAM228BP0C875 321 aa14.32□□□□□ -0.12
VMP1-210ENST00000589823 GZMAP12544 262 aa14.32□□□□□ -0.12
VMP1-210ENST00000589823 FECHP22830 423 aa14.32□□□□□ -0.12
VMP1-210ENST00000589823 MMP8P22894 467 aa14.32□□□□□ -0.12
VMP1-210ENST00000589823 EPHA5P54756 1037 aa14.32□□□□□ -0.12
VMP1-210ENST00000589823 NTHL1P78549 312 aa14.32□□□□□ -0.12
VMP1-210ENST00000589823 CCDC122Q5T0U0 273 aa14.32□□□□□ -0.12
VMP1-210ENST00000589823 PM20D1Q6GTS8 502 aa14.32□□□□□ -0.12
VMP1-210ENST00000589823 OR6B2Q6IFH4 312 aa14.32□□□□□ -0.12
VMP1-210ENST00000589823 ALKBH5Q6P6C2 394 aaKnown RBP14.32□□□□□ -0.12
VMP1-210ENST00000589823 MMS22LQ6ZRQ5 1243 aa14.32□□□□□ -0.12
VMP1-210ENST00000589823 PHF13Q86YI8 300 aaPredicted RBP14.32□□□□□ -0.12
VMP1-210ENST00000589823 ZDHHC17Q8IUH5 632 aa14.32□□□□□ -0.12
VMP1-210ENST00000589823 SCML4Q8N228 414 aa14.32□□□□□ -0.12
VMP1-210ENST00000589823 ARHGAP18Q8N392 663 aa14.32□□□□□ -0.12
VMP1-210ENST00000589823 OLIG1Q8TAK6 271 aa14.32□□□□□ -0.12
VMP1-210ENST00000589823 GOLGA1Q92805 767 aa14.32□□□□□ -0.12
VMP1-210ENST00000589823 PDLIM2Q96JY6 352 aa14.32□□□□□ -0.12
VMP1-210ENST00000589823 NECTIN4Q96NY8 510 aa14.32□□□□□ -0.12
VMP1-210ENST00000589823 C11orf70Q9BRQ4 267 aa14.32□□□□□ -0.12
VMP1-210ENST00000589823 LRRC3Q9BY71 257 aa14.32□□□□□ -0.12
VMP1-210ENST00000589823 ATXN3LQ9H3M9 355 aa14.32□□□□□ -0.12
VMP1-210ENST00000589823 AVENQ9NQS1 362 aaPredicted RBP14.32□□□□□ -0.12
VMP1-210ENST00000589823 TLR8Q9NR97 1041 aaKnown RBP14.32□□□□□ -0.12
VMP1-210ENST00000589823 ADAM22Q9P0K1 906 aa14.32□□□□□ -0.12
VMP1-210ENST00000589823 GMIPQ9P107 970 aa14.32□□□□□ -0.12
VMP1-210ENST00000589823 STRIP2Q9ULQ0 834 aa14.32□□□□□ -0.12
VMP1-210ENST00000589823 CLUHO75153 1309 aa14.32□□□□□ -0.12
VMP1-210ENST00000589823 PATJQ8NI35 1801 aa14.31□□□□□ -0.12
VMP1-210ENST00000589823 A0A1W2PRU2 124 aa14.31□□□□□ -0.12
VMP1-210ENST00000589823 GABBR2O75899 941 aa14.31□□□□□ -0.12
VMP1-210ENST00000589823 ABL1P00519 1130 aa14.31□□□□□ -0.12
VMP1-210ENST00000589823 FTLP02792 175 aaPredicted RBP14.31□□□□□ -0.12
VMP1-210ENST00000589823 F11P03951 625 aa14.31□□□□□ -0.12
VMP1-210ENST00000589823 ERBB2P04626 1255 aa14.31□□□□□ -0.12
VMP1-210ENST00000589823 FSHRP23945 695 aa14.31□□□□□ -0.12
VMP1-210ENST00000589823 GABRB2P47870 512 aa14.31□□□□□ -0.12
VMP1-210ENST00000589823 DAOAP59103 153 aa14.31□□□□□ -0.12
VMP1-210ENST00000589823 MRPS5P82675 430 aaKnown RBP14.31□□□□□ -0.12
VMP1-210ENST00000589823 GFPT1Q06210 699 aaPredicted RBP14.31□□□□□ -0.12
VMP1-210ENST00000589823 C1QBPQ07021 282 aaKnown RBP14.31□□□□□ -0.12
VMP1-210ENST00000589823 CCDC173Q0VFZ6 552 aa14.31□□□□□ -0.12
VMP1-210ENST00000589823 SMAD4Q13485 552 aaKnown RBP14.31□□□□□ -0.12
VMP1-210ENST00000589823 ASTE1Q2TB18 679 aaPredicted RBP14.31□□□□□ -0.12
VMP1-210ENST00000589823 ARHGAP15Q53QZ3 475 aa14.31□□□□□ -0.12
VMP1-210ENST00000589823 TOGARAM2Q6ZUX3 1019 aa14.31□□□□□ -0.12
VMP1-210ENST00000589823 MON1AQ86VX9 555 aa14.31□□□□□ -0.12
VMP1-210ENST00000589823 SCUBE3Q8IX30 993 aa14.31□□□□□ -0.12
VMP1-210ENST00000589823 CCDC112Q8NEF3 446 aa14.31□□□□□ -0.12
VMP1-210ENST00000589823 FEZF2Q8TBJ5 459 aa14.31□□□□□ -0.12
VMP1-210ENST00000589823 IRGQQ8WZA9 623 aa14.31□□□□□ -0.12
VMP1-210ENST00000589823 MRPS31Q92665 395 aaKnown RBP14.31□□□□□ -0.12
VMP1-210ENST00000589823 TRIM11Q96F44 468 aa14.31□□□□□ -0.12
VMP1-210ENST00000589823 ISCUQ9H1K1 167 aa14.31□□□□□ -0.12
VMP1-210ENST00000589823 IL21Q9HBE4 155 aa14.31□□□□□ -0.12
VMP1-210ENST00000589823 WDR6Q9NNW5 1121 aaKnown RBP14.31□□□□□ -0.12
VMP1-210ENST00000589823 TAS2R14Q9NYV8 317 aa14.31□□□□□ -0.12
VMP1-210ENST00000589823 WDR35Q9P2L0 1181 aa14.31□□□□□ -0.12
VMP1-210ENST00000589823 TJP2Q9UDY2 1190 aa14.31□□□□□ -0.12
VMP1-210ENST00000589823 CHORDC1Q9UHD1 332 aaPredicted RBP14.31□□□□□ -0.12
VMP1-210ENST00000589823 NAGPAQ9UK23 515 aa14.31□□□□□ -0.12
VMP1-210ENST00000589823 MRPS23Q9Y3D9 190 aaKnown RBP14.31□□□□□ -0.12
VMP1-210ENST00000589823 USP15Q9Y4E8 981 aaPredicted RBP14.31□□□□□ -0.12
VMP1-210ENST00000589823 PAPSS1O43252 624 aaPredicted RBP14.3□□□□□ -0.12
VMP1-210ENST00000589823 IPO7O95373 1038 aaKnown RBP14.3□□□□□ -0.12
VMP1-210ENST00000589823 PSEN1P49768 467 aa14.3□□□□□ -0.12
VMP1-210ENST00000589823 YWHAGP61981 247 aaKnown RBP eCLIP14.3□□□□□ -0.12
VMP1-210ENST00000589823 ZNF268Q14587 947 aaPredicted RBP14.3□□□□□ -0.12
VMP1-210ENST00000589823 CBX2Q14781 532 aaPredicted RBP14.3□□□□□ -0.12
VMP1-210ENST00000589823 LEXMQ3ZCV2 418 aa14.3□□□□□ -0.12
VMP1-210ENST00000589823 EFHC1Q5JVL4 640 aa14.3□□□□□ -0.12
VMP1-210ENST00000589823 FAM183BPQ6ZVS7 135 aa14.3□□□□□ -0.12
VMP1-210ENST00000589823 GAREM2Q75VX8 874 aa14.3□□□□□ -0.12
VMP1-210ENST00000589823 MON1BQ7L1V2 547 aa14.3□□□□□ -0.12
VMP1-210ENST00000589823 XYLT1Q86Y38 959 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms