RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 NAGPAQ9UK23 515 aa12.81□□□□□ -0.36
DNMT1-218ENST00000589294 NCANO14594 1321 aa12.81□□□□□ -0.36
DNMT1-218ENST00000589294 SOBPA7XYQ1 873 aa12.8□□□□□ -0.36
DNMT1-218ENST00000589294 SART1O43290 800 aaKnown RBP12.8□□□□□ -0.36
DNMT1-218ENST00000589294 FTLP02792 175 aaPredicted RBP12.8□□□□□ -0.36
DNMT1-218ENST00000589294 F11P03951 625 aa12.8□□□□□ -0.36
DNMT1-218ENST00000589294 CALB1P05937 261 aa12.8□□□□□ -0.36
DNMT1-218ENST00000589294 LCP1P13796 627 aa12.8□□□□□ -0.36
DNMT1-218ENST00000589294 MTHFRP42898 656 aa12.8□□□□□ -0.36
DNMT1-218ENST00000589294 PSEN1P49768 467 aa12.8□□□□□ -0.36
DNMT1-218ENST00000589294 USP46P62068 366 aa12.8□□□□□ -0.36
DNMT1-218ENST00000589294 CCDC173Q0VFZ6 552 aa12.8□□□□□ -0.36
DNMT1-218ENST00000589294 TAF10Q12962 218 aa12.8□□□□□ -0.36
DNMT1-218ENST00000589294 SKIV2LQ15477 1246 aaKnown RBP12.8□□□□□ -0.36
DNMT1-218ENST00000589294 C10orf76Q5T2E6 689 aa12.8□□□□□ -0.36
DNMT1-218ENST00000589294 SNX30Q5VWJ9 437 aa12.8□□□□□ -0.36
DNMT1-218ENST00000589294 ALKBH5Q6P6C2 394 aaKnown RBP12.8□□□□□ -0.36
DNMT1-218ENST00000589294 GPRIN1Q7Z2K8 1008 aa12.8□□□□□ -0.36
DNMT1-218ENST00000589294 LRRC8AQ8IWT6 810 aa12.8□□□□□ -0.36
DNMT1-218ENST00000589294 ARHGAP18Q8N392 663 aa12.8□□□□□ -0.36
DNMT1-218ENST00000589294 CCDC112Q8NEF3 446 aa12.8□□□□□ -0.36
DNMT1-218ENST00000589294 IPO4Q8TEX9 1081 aaKnown RBP12.8□□□□□ -0.36
DNMT1-218ENST00000589294 PPM1EQ8WY54 764 aa12.8□□□□□ -0.36
DNMT1-218ENST00000589294 RIPOR3Q96MK2 946 aa12.8□□□□□ -0.36
DNMT1-218ENST00000589294 NECTIN4Q96NY8 510 aa12.8□□□□□ -0.36
DNMT1-218ENST00000589294 PPP1R9BQ96SB3 815 aa12.8□□□□□ -0.36
DNMT1-218ENST00000589294 UBE2ZQ9H832 354 aaPredicted RBP12.8□□□□□ -0.36
DNMT1-218ENST00000589294 ADAM22Q9P0K1 906 aa12.8□□□□□ -0.36
DNMT1-218ENST00000589294 WDR35Q9P2L0 1181 aa12.8□□□□□ -0.36
DNMT1-218ENST00000589294 CD207Q9UJ71 328 aa12.8□□□□□ -0.36
DNMT1-218ENST00000589294 STRIP2Q9ULQ0 834 aa12.8□□□□□ -0.36
DNMT1-218ENST00000589294 MAGED2Q9UNF1 606 aaPredicted RBP12.8□□□□□ -0.36
DNMT1-218ENST00000589294 EPN1Q9Y6I3 576 aaPredicted RBP12.8□□□□□ -0.36
DNMT1-218ENST00000589294 REV3LO60673 3130 aa12.8□□□□□ -0.36
DNMT1-218ENST00000589294 E5RJQ4 531 aa12.79□□□□□ -0.36
DNMT1-218ENST00000589294 NRDCO43847 1150 aa12.79□□□□□ -0.36
DNMT1-218ENST00000589294 LCA5LO95447 670 aa12.79□□□□□ -0.36
DNMT1-218ENST00000589294 RHOP08100 348 aa12.79□□□□□ -0.36
DNMT1-218ENST00000589294 GLI1P08151 1106 aa12.79□□□□□ -0.36
DNMT1-218ENST00000589294 USP17L7P0C7H9 530 aa12.79□□□□□ -0.36
DNMT1-218ENST00000589294 ZDHHC11BP0C7U3 371 aa12.79□□□□□ -0.36
DNMT1-218ENST00000589294 CDC25CP30307 473 aa12.79□□□□□ -0.36
DNMT1-218ENST00000589294 CYLC1P35663 651 aaPredicted RBP12.79□□□□□ -0.36
DNMT1-218ENST00000589294 SCNN1AP37088 669 aa12.79□□□□□ -0.36
DNMT1-218ENST00000589294 MRPS5P82675 430 aaKnown RBP12.79□□□□□ -0.36
DNMT1-218ENST00000589294 ADIGQ0VDE8 80 aa12.79□□□□□ -0.36
DNMT1-218ENST00000589294 PTP4A2Q12974 167 aa12.79□□□□□ -0.36
DNMT1-218ENST00000589294 PTPN20Q4JDL3 420 aa12.79□□□□□ -0.36
DNMT1-218ENST00000589294 EFHC1Q5JVL4 640 aa12.79□□□□□ -0.36
DNMT1-218ENST00000589294 CCDC122Q5T0U0 273 aa12.79□□□□□ -0.36
DNMT1-218ENST00000589294 PDZD4Q76G19 769 aaPredicted RBP12.79□□□□□ -0.36
DNMT1-218ENST00000589294 BEND5Q7L4P6 421 aa12.79□□□□□ -0.36
DNMT1-218ENST00000589294 GRASPQ7Z6J2 395 aaPredicted RBP12.79□□□□□ -0.36
DNMT1-218ENST00000589294 TMC8Q8IU68 726 aa12.79□□□□□ -0.36
DNMT1-218ENST00000589294 TMEM139Q8IV31 216 aa12.79□□□□□ -0.36
DNMT1-218ENST00000589294 MCOLN2Q8IZK6 566 aa12.79□□□□□ -0.36
DNMT1-218ENST00000589294 HS6ST3Q8IZP7 471 aa12.79□□□□□ -0.36
DNMT1-218ENST00000589294 ZNF276Q8N554 614 aa12.79□□□□□ -0.36
DNMT1-218ENST00000589294 SMRP1Q8NCR6 262 aa12.79□□□□□ -0.36
DNMT1-218ENST00000589294 FBXO32Q969P5 355 aa12.79□□□□□ -0.36
DNMT1-218ENST00000589294 TRIM11Q96F44 468 aa12.79□□□□□ -0.36
DNMT1-218ENST00000589294 TRIM62Q9BVG3 475 aa12.79□□□□□ -0.36
DNMT1-218ENST00000589294 ULBP1Q9BZM6 244 aa12.79□□□□□ -0.36
DNMT1-218ENST00000589294 IL21Q9HBE4 155 aa12.79□□□□□ -0.36
DNMT1-218ENST00000589294 WDR6Q9NNW5 1121 aaKnown RBP12.79□□□□□ -0.36
DNMT1-218ENST00000589294 TLR8Q9NR97 1041 aaKnown RBP12.79□□□□□ -0.36
DNMT1-218ENST00000589294 HCFC1R1Q9NWW0 138 aa12.79□□□□□ -0.36
DNMT1-218ENST00000589294 CLIC5Q9NZA1 410 aa12.79□□□□□ -0.36
DNMT1-218ENST00000589294 TRPM5Q9NZQ8 1165 aa12.79□□□□□ -0.36
DNMT1-218ENST00000589294 CHORDC1Q9UHD1 332 aaPredicted RBP12.79□□□□□ -0.36
DNMT1-218ENST00000589294 ZMYM5Q9UJ78 669 aa12.79□□□□□ -0.36
DNMT1-218ENST00000589294 NENFQ9UMX5 172 aa12.79□□□□□ -0.36
DNMT1-218ENST00000589294 ZNF840PA6NDX5 716 aa12.78□□□□□ -0.36
DNMT1-218ENST00000589294 TMCO5BA8MYB1 307 aa12.78□□□□□ -0.36
DNMT1-218ENST00000589294 EIF3CLB5ME19 914 aaKnown RBP12.78□□□□□ -0.36
DNMT1-218ENST00000589294 PAPSS1O43252 624 aaPredicted RBP12.78□□□□□ -0.36
DNMT1-218ENST00000589294 ERBB2P04626 1255 aa12.78□□□□□ -0.36
DNMT1-218ENST00000589294 MYBL1P10243 752 aa12.78□□□□□ -0.36
DNMT1-218ENST00000589294 PFKLP17858 780 aa12.78□□□□□ -0.36
DNMT1-218ENST00000589294 KCNA5P22460 613 aa12.78□□□□□ -0.36
DNMT1-218ENST00000589294 GABRR2P28476 465 aa12.78□□□□□ -0.36
DNMT1-218ENST00000589294 GSCP56915 257 aaPredicted RBP12.78□□□□□ -0.36
DNMT1-218ENST00000589294 DAOAP59103 153 aa12.78□□□□□ -0.36
DNMT1-218ENST00000589294 SLC6A3Q01959 620 aa12.78□□□□□ -0.36
DNMT1-218ENST00000589294 GFPT1Q06210 699 aaPredicted RBP12.78□□□□□ -0.36
DNMT1-218ENST00000589294 PUS10Q3MIT2 529 aaKnown RBP12.78□□□□□ -0.36
DNMT1-218ENST00000589294 MMS22LQ6ZRQ5 1243 aa12.78□□□□□ -0.36
DNMT1-218ENST00000589294 TOGARAM2Q6ZUX3 1019 aa12.78□□□□□ -0.36
DNMT1-218ENST00000589294 GAREM2Q75VX8 874 aa12.78□□□□□ -0.36
DNMT1-218ENST00000589294 MON1BQ7L1V2 547 aa12.78□□□□□ -0.36
DNMT1-218ENST00000589294 TMEM150AQ86TG1 271 aa12.78□□□□□ -0.36
DNMT1-218ENST00000589294 XYLT1Q86Y38 959 aa12.78□□□□□ -0.36
DNMT1-218ENST00000589294 STKLD1Q8NE28 680 aa12.78□□□□□ -0.36
DNMT1-218ENST00000589294 MAFAQ8NHW3 353 aaPredicted RBP12.78□□□□□ -0.36
DNMT1-218ENST00000589294 GOLGA1Q92805 767 aa12.78□□□□□ -0.36
DNMT1-218ENST00000589294 MCRS1Q96EZ8 462 aa12.78□□□□□ -0.36
DNMT1-218ENST00000589294 GCNAQ96QF7 691 aa12.78□□□□□ -0.36
DNMT1-218ENST00000589294 EIF3CQ99613 913 aaKnown RBP12.78□□□□□ -0.36
DNMT1-218ENST00000589294 ZNF334Q9HCZ1 680 aaPredicted RBP12.78□□□□□ -0.36
DNMT1-218ENST00000589294 ASNSD1Q9NWL6 643 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms