RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 SLC35B2Q8TB61 432 aa10.43□□□□□ -0.74
VPS25-202ENST00000589219 STK32AQ8WU08 396 aa10.43□□□□□ -0.74
VPS25-202ENST00000589219 MYLIPQ8WY64 445 aa10.43□□□□□ -0.74
VPS25-202ENST00000589219 RAPGEF5Q92565 580 aa10.43□□□□□ -0.74
VPS25-202ENST00000589219 KAT2BQ92831 832 aa10.43□□□□□ -0.74
VPS25-202ENST00000589219 TIFAQ96CG3 184 aa10.43□□□□□ -0.74
VPS25-202ENST00000589219 OSMRQ99650 979 aa10.43□□□□□ -0.74
VPS25-202ENST00000589219 TRIM6Q9C030 488 aaPredicted RBP10.43□□□□□ -0.74
VPS25-202ENST00000589219 PPCSQ9HAB8 311 aa10.43□□□□□ -0.74
VPS25-202ENST00000589219 CYLDQ9NQC7 956 aa10.43□□□□□ -0.74
VPS25-202ENST00000589219 SNTG2Q9NY99 539 aa10.43□□□□□ -0.74
VPS25-202ENST00000589219 HESX1Q9UBX0 185 aa10.43□□□□□ -0.74
VPS25-202ENST00000589219 DNPEPQ9ULA0 475 aa10.43□□□□□ -0.74
VPS25-202ENST00000589219 ZNF148Q9UQR1 794 aa10.43□□□□□ -0.74
VPS25-202ENST00000589219 EYSQ5T1H1 3165 aa10.43□□□□□ -0.74
VPS25-202ENST00000589219 C17orf102A2RUQ5 167 aa10.42□□□□□ -0.74
VPS25-202ENST00000589219 ZNF487B1APH4 448 aa10.42□□□□□ -0.74
VPS25-202ENST00000589219 APOC4-APOC2K7ER74 178 aa10.42□□□□□ -0.74
VPS25-202ENST00000589219 TRUB2O95900 331 aaKnown RBP10.42□□□□□ -0.74
VPS25-202ENST00000589219 APOC2P02655 101 aa10.42□□□□□ -0.74
VPS25-202ENST00000589219 FGBP02675 491 aa10.42□□□□□ -0.74
VPS25-202ENST00000589219 KRT10P13645 584 aa10.42□□□□□ -0.74
VPS25-202ENST00000589219 KCNE1P15382 129 aa10.42□□□□□ -0.74
VPS25-202ENST00000589219 KDELR1P24390 212 aa10.42□□□□□ -0.74
VPS25-202ENST00000589219 HOXC8P31273 242 aa10.42□□□□□ -0.74
VPS25-202ENST00000589219 CHKAP35790 457 aa10.42□□□□□ -0.74
VPS25-202ENST00000589219 MMP13P45452 471 aa10.42□□□□□ -0.74
VPS25-202ENST00000589219 CCT5P48643 541 aa10.42□□□□□ -0.74
VPS25-202ENST00000589219 ADAM17P78536 824 aa10.42□□□□□ -0.74
VPS25-202ENST00000589219 ORC1Q13415 861 aa10.42□□□□□ -0.74
VPS25-202ENST00000589219 TFDP2Q14188 446 aa10.42□□□□□ -0.74
VPS25-202ENST00000589219 STAT4Q14765 748 aa10.42□□□□□ -0.74
VPS25-202ENST00000589219 TRIP13Q15645 432 aaPredicted RBP10.42□□□□□ -0.74
VPS25-202ENST00000589219 RAB30Q15771 203 aa10.42□□□□□ -0.74
VPS25-202ENST00000589219 P3H1Q32P28 736 aa10.42□□□□□ -0.74
VPS25-202ENST00000589219 PKDCCQ504Y2 493 aa10.42□□□□□ -0.74
VPS25-202ENST00000589219 XKR4Q5GH76 650 aa10.42□□□□□ -0.74
VPS25-202ENST00000589219 RASIP1Q5U651 963 aa10.42□□□□□ -0.74
VPS25-202ENST00000589219 TXNRD3NBQ6F5E7 133 aa10.42□□□□□ -0.74
VPS25-202ENST00000589219 C16orf59Q7L2K0 433 aa10.42□□□□□ -0.74
VPS25-202ENST00000589219 NLRP14Q86W24 1093 aa10.42□□□□□ -0.74
VPS25-202ENST00000589219 NME8Q8N427 588 aa10.42□□□□□ -0.74
VPS25-202ENST00000589219 TEKT4Q8WW24 435 aa10.42□□□□□ -0.74
VPS25-202ENST00000589219 HERVK_113Q902F9 699 aa10.42□□□□□ -0.74
VPS25-202ENST00000589219 TBCBQ99426 244 aa10.42□□□□□ -0.74
VPS25-202ENST00000589219 CCDC77Q9BR77 488 aa10.42□□□□□ -0.74
VPS25-202ENST00000589219 MTG1Q9BT17 334 aaPredicted RBP10.42□□□□□ -0.74
VPS25-202ENST00000589219 TRPV6Q9H1D0 765 aa10.42□□□□□ -0.74
VPS25-202ENST00000589219 ZNF576Q9H609 170 aa10.42□□□□□ -0.74
VPS25-202ENST00000589219 ZWILCHQ9H900 591 aa10.42□□□□□ -0.74
VPS25-202ENST00000589219 RSAD1Q9HA92 442 aa10.42□□□□□ -0.74
VPS25-202ENST00000589219 NINJ2Q9NZG7 142 aa10.42□□□□□ -0.74
VPS25-202ENST00000589219 TJP2Q9UDY2 1190 aa10.42□□□□□ -0.74
VPS25-202ENST00000589219 TUBGCP4Q9UGJ1 667 aa10.42□□□□□ -0.74
VPS25-202ENST00000589219 RSPH14Q9UHP6 348 aa10.42□□□□□ -0.74
VPS25-202ENST00000589219 MSRAQ9UJ68 235 aa10.42□□□□□ -0.74
VPS25-202ENST00000589219 GGA2Q9UJY4 613 aa10.42□□□□□ -0.74
VPS25-202ENST00000589219 PIN4Q9Y237 131 aaKnown RBP10.42□□□□□ -0.74
VPS25-202ENST00000589219 SNX9Q9Y5X1 595 aa10.42□□□□□ -0.74
VPS25-202ENST00000589219 CDH23Q9H251 3354 aa10.42□□□□□ -0.74
VPS25-202ENST00000589219 C2CD4BA6NLJ0 364 aa10.41□□□□□ -0.74
VPS25-202ENST00000589219 E5RJQ4 531 aa10.41□□□□□ -0.74
VPS25-202ENST00000589219 MCF2LO15068 1137 aa10.41□□□□□ -0.74
VPS25-202ENST00000589219 TRAPPC3O43617 180 aa10.41□□□□□ -0.74
VPS25-202ENST00000589219 FAM107AO95990 144 aa10.41□□□□□ -0.74
VPS25-202ENST00000589219 RPLP2P05387 115 aaKnown RBP10.41□□□□□ -0.74
VPS25-202ENST00000589219 PFKMP08237 780 aa10.41□□□□□ -0.74
VPS25-202ENST00000589219 MYL3P08590 195 aa10.41□□□□□ -0.74
VPS25-202ENST00000589219 ACRP10323 421 aa10.41□□□□□ -0.74
VPS25-202ENST00000589219 IL1R2P27930 398 aa10.41□□□□□ -0.74
VPS25-202ENST00000589219 MIPP30301 263 aa10.41□□□□□ -0.74
VPS25-202ENST00000589219 VPS41P49754 854 aa10.41□□□□□ -0.74
VPS25-202ENST00000589219 ARSEP51690 589 aa10.41□□□□□ -0.74
VPS25-202ENST00000589219 CRYBB1P53674 252 aaPredicted RBP10.41□□□□□ -0.74
VPS25-202ENST00000589219 BCAT1P54687 386 aa10.41□□□□□ -0.74
VPS25-202ENST00000589219 PURAQ00577 322 aaKnown RBP10.41□□□□□ -0.74
VPS25-202ENST00000589219 AUHQ13825 339 aaKnown RBP10.41□□□□□ -0.74
VPS25-202ENST00000589219 SV2CQ496J9 727 aa10.41□□□□□ -0.74
VPS25-202ENST00000589219 ATP13A4Q4VNC1 1196 aa10.41□□□□□ -0.74
VPS25-202ENST00000589219 FAM47CQ5HY64 1035 aa10.41□□□□□ -0.74
VPS25-202ENST00000589219 FBXO47Q5MNV8 452 aa10.41□□□□□ -0.74
VPS25-202ENST00000589219 C9orf57Q5W0N0 161 aa10.41□□□□□ -0.74
VPS25-202ENST00000589219 TTC19Q6DKK2 380 aaPredicted RBP10.41□□□□□ -0.74
VPS25-202ENST00000589219 OR6B2Q6IFH4 312 aa10.41□□□□□ -0.74
VPS25-202ENST00000589219 TAF2Q6P1X5 1199 aa10.41□□□□□ -0.74
VPS25-202ENST00000589219 ALKAL1Q6UXT8 129 aa10.41□□□□□ -0.74
VPS25-202ENST00000589219 FAM183BPQ6ZVS7 135 aa10.41□□□□□ -0.74
VPS25-202ENST00000589219 RFX6Q8HWS3 928 aa10.41□□□□□ -0.74
VPS25-202ENST00000589219 CMASQ8NFW8 434 aaPredicted RBP10.41□□□□□ -0.74
VPS25-202ENST00000589219 MYCBPAPQ8TBZ2 947 aa10.41□□□□□ -0.74
VPS25-202ENST00000589219 EPS8L3Q8TE67 593 aaKnown RBP10.41□□□□□ -0.74
VPS25-202ENST00000589219 ZNF473Q8WTR7 871 aaKnown RBP10.41□□□□□ -0.74
VPS25-202ENST00000589219 CFAP57Q96MR6 1250 aa10.41□□□□□ -0.74
VPS25-202ENST00000589219 SELENOSQ9BQE4 189 aa10.41□□□□□ -0.74
VPS25-202ENST00000589219 MRPL45Q9BRJ2 306 aaKnown RBP10.41□□□□□ -0.74
VPS25-202ENST00000589219 SLC4A5Q9BY07 1137 aa10.41□□□□□ -0.74
VPS25-202ENST00000589219 EIF2AQ9BY44 585 aaKnown RBP10.41□□□□□ -0.74
VPS25-202ENST00000589219 NXF3Q9H4D5 531 aaKnown RBP10.41□□□□□ -0.74
VPS25-202ENST00000589219 GDAP2Q9NXN4 497 aa10.41□□□□□ -0.74
VPS25-202ENST00000589219 LGALS13Q9UHV8 139 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms