RNA–Protein interactions for RNA: ENST00000589167.1

NEDD4L-226, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4L, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-226ENST00000589167 DDX43Q9NXZ2 648 aaKnown RBP7.47□□□□□ -1.21
NEDD4L-226ENST00000589167 HSFX1Q9UBD0 423 aa7.47□□□□□ -1.21
NEDD4L-226ENST00000589167 SIX4Q9UIU6 781 aa7.47□□□□□ -1.21
NEDD4L-226ENST00000589167 ITGA11Q9UKX5 1188 aa7.47□□□□□ -1.21
NEDD4L-226ENST00000589167 USP18Q9UMW8 372 aa7.47□□□□□ -1.21
NEDD4L-226ENST00000589167 MAGED2Q9UNF1 606 aaPredicted RBP7.47□□□□□ -1.21
NEDD4L-226ENST00000589167 CCL26Q9Y258 94 aa7.47□□□□□ -1.21
NEDD4L-226ENST00000589167 PCDHB5Q9Y5E4 795 aa7.47□□□□□ -1.21
NEDD4L-226ENST00000589167 SNX9Q9Y5X1 595 aa7.47□□□□□ -1.21
NEDD4L-226ENST00000589167 MYBPHLA2RUH7 354 aa7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 CHURC1-FNTBB4DL54 471 aa7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 EXTL3O43909 919 aa7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 HUS1O60921 280 aa7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 PRPF40AO75400 957 aaKnown RBP7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 ARSAP15289 507 aa7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 HMGA1P17096 107 aaKnown RBP7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 CYP2F1P24903 491 aa7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 AVPR1AP37288 418 aa7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 FNTBP49356 437 aa7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 NLRP12P59046 1061 aa7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 PSMC1P62191 440 aaKnown RBP7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 MYL7Q01449 175 aa7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 POU5F1Q01860 360 aaKnown RBP7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 SMARCB1Q12824 385 aa7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 SLC39A14Q15043 492 aa7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 NFE2Q16621 373 aaPredicted RBP7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 DDR2Q16832 855 aa7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 ITPRIPL2Q3MIP1 535 aa7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 NAIF1Q69YI7 327 aaPredicted RBP7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 TXNDC8Q6A555 127 aa7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 TRIM68Q6AZZ1 485 aa7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 PKN3Q6P5Z2 889 aa7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 DGLUCYQ7Z3D6 616 aa7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 TMEM150AQ86TG1 271 aa7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 NT5DC4Q86YG4 428 aa7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 CCDC65Q8IXS2 484 aa7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 CMTM8Q8IZV2 173 aa7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 SPEM1Q8N4L4 309 aa7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 CSGALNACT2Q8N6G5 542 aa7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 MAB21L3Q8N8X9 362 aa7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 LINC00301Q8NCQ3 95 aa7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 OR5B17Q8NGF7 314 aa7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 CXorf38Q8TB03 319 aa7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 LEO1Q8WVC0 666 aaPredicted RBP7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 DHX58Q96C10 678 aa7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 INTS4Q96HW7 963 aaKnown RBP7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 ANKRD36BP1Q96IX9 119 aa7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 IER2Q9BTL4 223 aa7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 SLC46A2Q9BY10 475 aa7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 FAM126AQ9BYI3 521 aaPredicted RBP7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 TRIM9Q9C026 710 aa7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 C8orf33Q9H7E9 229 aaPredicted RBP7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 TRPC7Q9HCX4 862 aa7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 PARD6AQ9NPB6 346 aa7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 HPS4Q9NQG7 708 aa7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 OBP2AQ9NY56 170 aa7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 ZDHHC3Q9NYG2 299 aa7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 KLF15Q9UIH9 416 aa7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 GMEB2Q9UKD1 530 aa7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 RAB23Q9ULC3 237 aa7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 MORC2Q9Y6X9 1032 aaPredicted RBP7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 KIF26AQ9ULI4 1882 aaPredicted RBP7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 TCHHQ07283 1943 aa7.46□□□□□ -1.22
NEDD4L-226ENST00000589167 K7ESF4 209 aa7.45□□□□□ -1.22
NEDD4L-226ENST00000589167 SPTLC2O15270 562 aa7.45□□□□□ -1.22
NEDD4L-226ENST00000589167 ADAM23O75077 832 aa7.45□□□□□ -1.22
NEDD4L-226ENST00000589167 LDHAP00338 332 aaKnown RBP7.45□□□□□ -1.22
NEDD4L-226ENST00000589167 TNNC2P02585 160 aa7.45□□□□□ -1.22
NEDD4L-226ENST00000589167 CKMP06732 381 aa7.45□□□□□ -1.22
NEDD4L-226ENST00000589167 CSH1P0DML2 217 aa7.45□□□□□ -1.22
NEDD4L-226ENST00000589167 CSH2P0DML3 217 aa7.45□□□□□ -1.22
NEDD4L-226ENST00000589167 PCSK1P29120 753 aa7.45□□□□□ -1.22
NEDD4L-226ENST00000589167 CASP1P29466 404 aa7.45□□□□□ -1.22
NEDD4L-226ENST00000589167 HOXD13P35453 343 aa7.45□□□□□ -1.22
NEDD4L-226ENST00000589167 CXCL12P48061 93 aa7.45□□□□□ -1.22
NEDD4L-226ENST00000589167 CYP2J2P51589 502 aa7.45□□□□□ -1.22
NEDD4L-226ENST00000589167 RBP5P82980 135 aa7.45□□□□□ -1.22
NEDD4L-226ENST00000589167 CCINQ13939 588 aa7.45□□□□□ -1.22
NEDD4L-226ENST00000589167 PPP2R5DQ14738 602 aa7.45□□□□□ -1.22
NEDD4L-226ENST00000589167 OCLNQ16625 522 aa7.45□□□□□ -1.22
NEDD4L-226ENST00000589167 RSPO4Q2I0M5 234 aaPredicted RBP7.45□□□□□ -1.22
NEDD4L-226ENST00000589167 FAM26FQ5R3K3 315 aa7.45□□□□□ -1.22
NEDD4L-226ENST00000589167 C1orf228Q6PIY5 440 aa7.45□□□□□ -1.22
NEDD4L-226ENST00000589167 STXBP4Q6ZWJ1 553 aa7.45□□□□□ -1.22
NEDD4L-226ENST00000589167 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.45□□□□□ -1.22
NEDD4L-226ENST00000589167 RALGPS2Q86X27 583 aaPredicted RBP7.45□□□□□ -1.22
NEDD4L-226ENST00000589167 SCN4BQ8IWT1 228 aa7.45□□□□□ -1.22
NEDD4L-226ENST00000589167 NELFCDQ8IXH7 590 aa7.45□□□□□ -1.22
NEDD4L-226ENST00000589167 GPD1LQ8N335 351 aa7.45□□□□□ -1.22
NEDD4L-226ENST00000589167 CELF5Q8N6W0 485 aaKnown RBP7.45□□□□□ -1.22
NEDD4L-226ENST00000589167 CACTINQ8WUQ7 758 aaKnown RBP7.45□□□□□ -1.22
NEDD4L-226ENST00000589167 KBTBD7Q8WVZ9 684 aa7.45□□□□□ -1.22
NEDD4L-226ENST00000589167 MRPS31Q92665 395 aaKnown RBP7.45□□□□□ -1.22
NEDD4L-226ENST00000589167 USP13Q92995 863 aaPredicted RBP7.45□□□□□ -1.22
NEDD4L-226ENST00000589167 SECISBP2LQ93073 1101 aaKnown RBP7.45□□□□□ -1.22
NEDD4L-226ENST00000589167 MYLPFQ96A32 169 aa7.45□□□□□ -1.22
NEDD4L-226ENST00000589167 CHFRQ96EP1 664 aa7.45□□□□□ -1.22
NEDD4L-226ENST00000589167 SLC22A12Q96S37 553 aa7.45□□□□□ -1.22
NEDD4L-226ENST00000589167 PKMYT1Q99640 499 aa7.45□□□□□ -1.22
NEDD4L-226ENST00000589167 SYT15Q9BQS2 421 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms