RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 FAM26EQ8N5C1 309 aa8.66□□□□□ -1.02
ATG4D-210ENST00000588972 GLT1D1Q96MS3 346 aa8.66□□□□□ -1.02
ATG4D-210ENST00000588972 C7orf25Q9BPX7 421 aa8.66□□□□□ -1.02
ATG4D-210ENST00000588972 TMEM47Q9BQJ4 181 aa8.66□□□□□ -1.02
ATG4D-210ENST00000588972 BTBD1Q9H0C5 482 aa8.66□□□□□ -1.02
ATG4D-210ENST00000588972 MTIF3Q9H2K0 278 aaKnown RBP8.66□□□□□ -1.02
ATG4D-210ENST00000588972 NGRNQ9NPE2 291 aaKnown RBP8.66□□□□□ -1.02
ATG4D-210ENST00000588972 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.66□□□□□ -1.02
ATG4D-210ENST00000588972 ISY1Q9ULR0 285 aaKnown RBP8.66□□□□□ -1.02
ATG4D-210ENST00000588972 MORC2Q9Y6X9 1032 aaPredicted RBP8.66□□□□□ -1.02
ATG4D-210ENST00000588972 LRRC14BA6NHZ5 514 aa8.65□□□□□ -1.02
ATG4D-210ENST00000588972 RHPN2P1A8MT19 583 aa8.65□□□□□ -1.02
ATG4D-210ENST00000588972 FAM171A2A8MVW0 826 aa8.65□□□□□ -1.02
ATG4D-210ENST00000588972 GRXCR1A8MXD5 290 aa8.65□□□□□ -1.02
ATG4D-210ENST00000588972 FRS3O43559 492 aa8.65□□□□□ -1.02
ATG4D-210ENST00000588972 TMEM127O75204 238 aa8.65□□□□□ -1.02
ATG4D-210ENST00000588972 RNASE1P07998 156 aaKnown RBP8.65□□□□□ -1.02
ATG4D-210ENST00000588972 CSF2RAP15509 400 aa8.65□□□□□ -1.02
ATG4D-210ENST00000588972 SPINK2P20155 84 aa8.65□□□□□ -1.02
ATG4D-210ENST00000588972 MCCP23508 829 aa8.65□□□□□ -1.02
ATG4D-210ENST00000588972 NOVP48745 357 aa8.65□□□□□ -1.02
ATG4D-210ENST00000588972 HK3P52790 923 aa8.65□□□□□ -1.02
ATG4D-210ENST00000588972 POU5F1BQ06416 359 aa8.65□□□□□ -1.02
ATG4D-210ENST00000588972 NECTIN1Q15223 517 aa8.65□□□□□ -1.02
ATG4D-210ENST00000588972 KCNA10Q16322 511 aa8.65□□□□□ -1.02
ATG4D-210ENST00000588972 ZC3H14Q6PJT7 736 aaKnown RBP8.65□□□□□ -1.02
ATG4D-210ENST00000588972 MYLK4Q86YV6 388 aaPredicted RBP8.65□□□□□ -1.02
ATG4D-210ENST00000588972 PCSK9Q8NBP7 692 aaKnown RBP8.65□□□□□ -1.02
ATG4D-210ENST00000588972 GMCL1P1Q8NEA9 526 aa8.65□□□□□ -1.02
ATG4D-210ENST00000588972 KLHDC9Q8NEP7 349 aa8.65□□□□□ -1.02
ATG4D-210ENST00000588972 GPR156Q8NFN8 814 aa8.65□□□□□ -1.02
ATG4D-210ENST00000588972 PPP1R14CQ8TAE6 165 aa8.65□□□□□ -1.02
ATG4D-210ENST00000588972 WDR48Q8TAF3 677 aa8.65□□□□□ -1.02
ATG4D-210ENST00000588972 ABHD4Q8TB40 342 aa8.65□□□□□ -1.02
ATG4D-210ENST00000588972 HOXB13Q92826 284 aaPredicted RBP8.65□□□□□ -1.02
ATG4D-210ENST00000588972 DDX11Q96FC9 970 aa8.65□□□□□ -1.02
ATG4D-210ENST00000588972 APIPQ96GX9 242 aa8.65□□□□□ -1.02
ATG4D-210ENST00000588972 CRB3Q9BUF7 120 aa8.65□□□□□ -1.02
ATG4D-210ENST00000588972 C1QTNF1Q9BXJ1 281 aa8.65□□□□□ -1.02
ATG4D-210ENST00000588972 KRT23Q9C075 422 aa8.65□□□□□ -1.02
ATG4D-210ENST00000588972 WDR12Q9GZL7 423 aaKnown RBP8.65□□□□□ -1.02
ATG4D-210ENST00000588972 ZMAT3Q9HA38 289 aaKnown RBP8.65□□□□□ -1.02
ATG4D-210ENST00000588972 DLL4Q9NR61 685 aa8.65□□□□□ -1.02
ATG4D-210ENST00000588972 TCP11L1Q9NUJ3 509 aa8.65□□□□□ -1.02
ATG4D-210ENST00000588972 ZHX1Q9UKY1 873 aaPredicted RBP8.65□□□□□ -1.02
ATG4D-210ENST00000588972 FAM184BQ9ULE4 1060 aa8.65□□□□□ -1.02
ATG4D-210ENST00000588972 ADAMTS5Q9UNA0 930 aa8.65□□□□□ -1.02
ATG4D-210ENST00000588972 GBF1Q92538 1859 aa8.65□□□□□ -1.02
ATG4D-210ENST00000588972 A0A0U1RQG5 324 aaPredicted RBP8.64□□□□□ -1.03
ATG4D-210ENST00000588972 MYADML2A6NDP7 307 aa8.64□□□□□ -1.03
ATG4D-210ENST00000588972 VWA5AO00534 786 aa8.64□□□□□ -1.03
ATG4D-210ENST00000588972 KPNA5O15131 536 aa8.64□□□□□ -1.03
ATG4D-210ENST00000588972 SGTAO43765 313 aa8.64□□□□□ -1.03
ATG4D-210ENST00000588972 DUSP11O75319 330 aaKnown RBP8.64□□□□□ -1.03
ATG4D-210ENST00000588972 IL18BPO95998 194 aa8.64□□□□□ -1.03
ATG4D-210ENST00000588972 RPLP2P05387 115 aaKnown RBP8.64□□□□□ -1.03
ATG4D-210ENST00000588972 TOP1P11387 765 aaKnown RBP8.64□□□□□ -1.03
ATG4D-210ENST00000588972 TNFSF4P23510 183 aa8.64□□□□□ -1.03
ATG4D-210ENST00000588972 ANTXR2P58335 489 aa8.64□□□□□ -1.03
ATG4D-210ENST00000588972 NKX6-1P78426 367 aaPredicted RBP8.64□□□□□ -1.03
ATG4D-210ENST00000588972 CD83Q01151 205 aa8.64□□□□□ -1.03
ATG4D-210ENST00000588972 TRDNQ13061 729 aa8.64□□□□□ -1.03
ATG4D-210ENST00000588972 PLCL1Q15111 1095 aa8.64□□□□□ -1.03
ATG4D-210ENST00000588972 DGKDQ16760 1214 aa8.64□□□□□ -1.03
ATG4D-210ENST00000588972 MAMDC4Q6UXC1 1216 aa8.64□□□□□ -1.03
ATG4D-210ENST00000588972 CD300LDQ6UXZ3 194 aa8.64□□□□□ -1.03
ATG4D-210ENST00000588972 ZNF365Q70YC5 407 aa8.64□□□□□ -1.03
ATG4D-210ENST00000588972 RALYLQ86SE5 291 aaKnown RBP8.64□□□□□ -1.03
ATG4D-210ENST00000588972 ZC3H18Q86VM9 953 aaKnown RBP8.64□□□□□ -1.03
ATG4D-210ENST00000588972 IQCA1Q86XH1 822 aa8.64□□□□□ -1.03
ATG4D-210ENST00000588972 RHOT1Q8IXI2 618 aa8.64□□□□□ -1.03
ATG4D-210ENST00000588972 MB21D2Q8IYB1 491 aaPredicted RBP8.64□□□□□ -1.03
ATG4D-210ENST00000588972 TMEM151AQ8N4L1 468 aa8.64□□□□□ -1.03
ATG4D-210ENST00000588972 NCOA7Q8NI08 942 aa8.64□□□□□ -1.03
ATG4D-210ENST00000588972 SLF1Q9BQI6 1058 aa8.64□□□□□ -1.03
ATG4D-210ENST00000588972 TEX13BQ9BXU2 312 aa8.64□□□□□ -1.03
ATG4D-210ENST00000588972 LRRC27Q9C0I9 530 aa8.64□□□□□ -1.03
ATG4D-210ENST00000588972 SLC28A3Q9HAS3 691 aa8.64□□□□□ -1.03
ATG4D-210ENST00000588972 CASS4Q9NQ75 786 aa8.64□□□□□ -1.03
ATG4D-210ENST00000588972 STK17AQ9UEE5 414 aa8.64□□□□□ -1.03
ATG4D-210ENST00000588972 CORO2BQ9UQ03 480 aa8.64□□□□□ -1.03
ATG4D-210ENST00000588972 MUC6Q6W4X9 2439 aa8.63□□□□□ -1.03
ATG4D-210ENST00000588972 TMEM232C9JQI7 657 aa8.63□□□□□ -1.03
ATG4D-210ENST00000588972 ASGR1P07306 291 aa8.63□□□□□ -1.03
ATG4D-210ENST00000588972 SLC1A4P43007 532 aa8.63□□□□□ -1.03
ATG4D-210ENST00000588972 GLRBP48167 497 aa8.63□□□□□ -1.03
ATG4D-210ENST00000588972 CDK7P50613 346 aa8.63□□□□□ -1.03
ATG4D-210ENST00000588972 SNAP25P60880 206 aa8.63□□□□□ -1.03
ATG4D-210ENST00000588972 TMEM62Q0P6H9 643 aa8.63□□□□□ -1.03
ATG4D-210ENST00000588972 TRIM14Q14142 442 aa8.63□□□□□ -1.03
ATG4D-210ENST00000588972 FGL2Q14314 439 aa8.63□□□□□ -1.03
ATG4D-210ENST00000588972 CCDC96Q2M329 555 aa8.63□□□□□ -1.03
ATG4D-210ENST00000588972 ADCK5Q3MIX3 580 aa8.63□□□□□ -1.03
ATG4D-210ENST00000588972 TUBB8Q3ZCM7 444 aa8.63□□□□□ -1.03
ATG4D-210ENST00000588972 DGKKQ5KSL6 1271 aa8.63□□□□□ -1.03
ATG4D-210ENST00000588972 TMC6Q7Z403 805 aa8.63□□□□□ -1.03
ATG4D-210ENST00000588972 FAM129CQ86XR2 697 aa8.63□□□□□ -1.03
ATG4D-210ENST00000588972 SMAP1Q8IYB5 467 aaPredicted RBP8.63□□□□□ -1.03
ATG4D-210ENST00000588972 CPXCR1Q8N123 301 aa8.63□□□□□ -1.03
ATG4D-210ENST00000588972 NKAPQ8N5F7 415 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms