RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 ANO4Q32M45 955 aa23.24■■□□□ 1.31
CAPNS1-205ENST00000588780 RILPL1Q5EBL4 403 aa23.24■■□□□ 1.31
CAPNS1-205ENST00000588780 KIAA1958Q8N8K9 716 aa23.24■■□□□ 1.31
CAPNS1-205ENST00000588780 SAAL1Q96ER3 474 aa23.24■■□□□ 1.31
CAPNS1-205ENST00000588780 GDAP2Q9NXN4 497 aa23.24■■□□□ 1.31
CAPNS1-205ENST00000588780 ITGA11Q9UKX5 1188 aa23.24■■□□□ 1.31
CAPNS1-205ENST00000588780 TRIM66O15016 1216 aa23.23■■□□□ 1.31
CAPNS1-205ENST00000588780 PDGFRBP09619 1106 aa23.23■■□□□ 1.31
CAPNS1-205ENST00000588780 CHRM1P11229 460 aaPredicted RBP23.23■■□□□ 1.31
CAPNS1-205ENST00000588780 NTSR1P30989 418 aa23.23■■□□□ 1.31
CAPNS1-205ENST00000588780 MYO1EQ12965 1108 aa23.23■■□□□ 1.31
CAPNS1-205ENST00000588780 TDRD10Q5VZ19 366 aaKnown RBP23.23■■□□□ 1.31
CAPNS1-205ENST00000588780 FAM171BQ6P995 826 aa23.23■■□□□ 1.31
CAPNS1-205ENST00000588780 TOGARAM2Q6ZUX3 1019 aa23.23■■□□□ 1.31
CAPNS1-205ENST00000588780 KCNV2Q8TDN2 545 aa23.23■■□□□ 1.31
CAPNS1-205ENST00000588780 FAM84AQ96KN4 292 aa23.23■■□□□ 1.31
CAPNS1-205ENST00000588780 SLITRK1Q96PX8 696 aa23.23■■□□□ 1.31
CAPNS1-205ENST00000588780 RBAKQ9NYW8 714 aaPredicted RBP23.23■■□□□ 1.31
CAPNS1-205ENST00000588780 CDH9Q9ULB4 789 aa23.23■■□□□ 1.31
CAPNS1-205ENST00000588780 PCDH15Q96QU1 1955 aa23.23■■□□□ 1.31
CAPNS1-205ENST00000588780 GABRDO14764 452 aa23.22■■□□□ 1.31
CAPNS1-205ENST00000588780 TMEM191BP0C7N4 346 aa23.22■■□□□ 1.31
CAPNS1-205ENST00000588780 WNT7BP56706 349 aa23.22■■□□□ 1.31
CAPNS1-205ENST00000588780 TAF10Q12962 218 aa23.22■■□□□ 1.31
CAPNS1-205ENST00000588780 SOWAHAQ2M3V2 549 aa23.22■■□□□ 1.31
CAPNS1-205ENST00000588780 WDR45BQ5MNZ6 344 aa23.22■■□□□ 1.31
CAPNS1-205ENST00000588780 HS2ST1Q7LGA3 356 aa23.22■■□□□ 1.31
CAPNS1-205ENST00000588780 CHPFQ8IZ52 775 aa23.22■■□□□ 1.31
CAPNS1-205ENST00000588780 KRI1Q8N9T8 703 aaKnown RBP23.22■■□□□ 1.31
CAPNS1-205ENST00000588780 GLIS3Q8NEA6 775 aa23.22■■□□□ 1.31
CAPNS1-205ENST00000588780 FIZ1Q96SL8 496 aa23.22■■□□□ 1.31
CAPNS1-205ENST00000588780 SCUBE2Q9NQ36 999 aa23.22■■□□□ 1.31
CAPNS1-205ENST00000588780 EXOC7Q9UPT5 735 aa23.22■■□□□ 1.31
CAPNS1-205ENST00000588780 SH3BP1Q9Y3L3 701 aa23.22■■□□□ 1.31
CAPNS1-205ENST00000588780 TULP3O75386 442 aa23.21■■□□□ 1.31
CAPNS1-205ENST00000588780 LMO2P25791 158 aa23.21■■□□□ 1.31
CAPNS1-205ENST00000588780 MAOBP27338 520 aa23.21■■□□□ 1.31
CAPNS1-205ENST00000588780 ADSSP30520 456 aa23.21■■□□□ 1.31
CAPNS1-205ENST00000588780 GRIK2Q13002 908 aa23.21■■□□□ 1.31
CAPNS1-205ENST00000588780 SLCO6A1Q86UG4 719 aa23.21■■□□□ 1.31
CAPNS1-205ENST00000588780 BRSK2Q8IWQ3 736 aa23.21■■□□□ 1.31
CAPNS1-205ENST00000588780 RAD54LQ92698 747 aa23.21■■□□□ 1.31
CAPNS1-205ENST00000588780 FOXJ1Q92949 421 aa23.21■■□□□ 1.31
CAPNS1-205ENST00000588780 CEP295NLQ96MC4 621 aa23.21■■□□□ 1.31
CAPNS1-205ENST00000588780 ASXL3Q9C0F0 2248 aa23.21■■□□□ 1.31
CAPNS1-205ENST00000588780 URB1O60287 2271 aaKnown RBP23.21■■□□□ 1.31
CAPNS1-205ENST00000588780 GOLGA8IPA6NC78 632 aa23.2■■□□□ 1.3
CAPNS1-205ENST00000588780 GOLGA8JA6NMD2 632 aa23.2■■□□□ 1.3
CAPNS1-205ENST00000588780 GOLGA8CPA6NN73 597 aa23.2■■□□□ 1.3
CAPNS1-205ENST00000588780 MEI4A8MW99 385 aa23.2■■□□□ 1.3
CAPNS1-205ENST00000588780 F8VP50 259 aa23.2■■□□□ 1.3
CAPNS1-205ENST00000588780 GJB3O75712 270 aa23.2■■□□□ 1.3
CAPNS1-205ENST00000588780 OAS1P00973 400 aaKnown RBP23.2■■□□□ 1.3
CAPNS1-205ENST00000588780 NDUFV2P19404 249 aa23.2■■□□□ 1.3
CAPNS1-205ENST00000588780 ARL6IP4Q66PJ3 421 aaKnown RBP23.2■■□□□ 1.3
CAPNS1-205ENST00000588780 SCARA3Q6AZY7 606 aa23.2■■□□□ 1.3
CAPNS1-205ENST00000588780 KIAA1324Q6UXG2 1013 aaKnown RBP23.2■■□□□ 1.3
CAPNS1-205ENST00000588780 ZSCAN31Q96LW9 406 aaPredicted RBP23.2■■□□□ 1.3
CAPNS1-205ENST00000588780 AK8Q96MA6 479 aa23.2■■□□□ 1.3
CAPNS1-205ENST00000588780 MMS19Q96T76 1030 aa23.2■■□□□ 1.3
CAPNS1-205ENST00000588780 TTLL2Q9BWV7 592 aa23.2■■□□□ 1.3
CAPNS1-205ENST00000588780 ZDHHC5Q9C0B5 715 aa23.2■■□□□ 1.3
CAPNS1-205ENST00000588780 MTMR12Q9C0I1 747 aa23.2■■□□□ 1.3
CAPNS1-205ENST00000588780 CRTAC1Q9NQ79 661 aa23.2■■□□□ 1.3
CAPNS1-205ENST00000588780 BLOC1S4Q9NUP1 217 aa23.2■■□□□ 1.3
CAPNS1-205ENST00000588780 E2F8A0AVK6 867 aa23.19■■□□□ 1.3
CAPNS1-205ENST00000588780 SLC26A4O43511 780 aa23.19■■□□□ 1.3
CAPNS1-205ENST00000588780 OLFM2O95897 454 aa23.19■■□□□ 1.3
CAPNS1-205ENST00000588780 LDHAP00338 332 aaKnown RBP23.19■■□□□ 1.3
CAPNS1-205ENST00000588780 MDH1BQ5I0G3 518 aa23.19■■□□□ 1.3
CAPNS1-205ENST00000588780 ZNF720Q7Z2F6 126 aa23.19■■□□□ 1.3
CAPNS1-205ENST00000588780 SFR1Q86XK3 245 aa23.19■■□□□ 1.3
CAPNS1-205ENST00000588780 SYCP3Q8IZU3 236 aa23.19■■□□□ 1.3
CAPNS1-205ENST00000588780 PHTF2Q8N3S3 785 aa23.19■■□□□ 1.3
CAPNS1-205ENST00000588780 TERB1Q8NA31 727 aa23.19■■□□□ 1.3
CAPNS1-205ENST00000588780 ZSWIM2Q8NEG5 633 aa23.19■■□□□ 1.3
CAPNS1-205ENST00000588780 IPO4Q8TEX9 1081 aaKnown RBP23.19■■□□□ 1.3
CAPNS1-205ENST00000588780 HVCN1Q96D96 273 aa23.19■■□□□ 1.3
CAPNS1-205ENST00000588780 OTUB2Q96DC9 234 aa23.19■■□□□ 1.3
CAPNS1-205ENST00000588780 HPDLQ96IR7 371 aa23.19■■□□□ 1.3
CAPNS1-205ENST00000588780 ANKRD36BP1Q96IX9 119 aa23.19■■□□□ 1.3
CAPNS1-205ENST00000588780 MIR1-1HGQ9H1L0 117 aa23.19■■□□□ 1.3
CAPNS1-205ENST00000588780 ST6GALNAC4Q9H4F1 302 aa23.19■■□□□ 1.3
CAPNS1-205ENST00000588780 MRPL44Q9H9J2 332 aaKnown RBP23.19■■□□□ 1.3
CAPNS1-205ENST00000588780 PLXNB3Q9ULL4 1909 aa23.18■■□□□ 1.3
CAPNS1-205ENST00000588780 DDIT3P35638 169 aa23.18■■□□□ 1.3
CAPNS1-205ENST00000588780 NOP14P78316 857 aaKnown RBP23.18■■□□□ 1.3
CAPNS1-205ENST00000588780 CYP4F3Q08477 520 aa23.18■■□□□ 1.3
CAPNS1-205ENST00000588780 C19orf57Q0VDD7 668 aa23.18■■□□□ 1.3
CAPNS1-205ENST00000588780 EGFLAMQ63HQ2 1017 aa23.18■■□□□ 1.3
CAPNS1-205ENST00000588780 GRAMD4Q6IC98 578 aa23.18■■□□□ 1.3
CAPNS1-205ENST00000588780 DPH6Q7L8W6 267 aa23.18■■□□□ 1.3
CAPNS1-205ENST00000588780 DYMQ7RTS9 669 aa23.18■■□□□ 1.3
CAPNS1-205ENST00000588780 SCFD1Q8WVM8 642 aa23.18■■□□□ 1.3
CAPNS1-205ENST00000588780 PCED1BQ96HM7 432 aa23.18■■□□□ 1.3
CAPNS1-205ENST00000588780 ZNF419Q96HQ0 510 aaPredicted RBP23.18■■□□□ 1.3
CAPNS1-205ENST00000588780 ACCSQ96QU6 501 aa23.18■■□□□ 1.3
CAPNS1-205ENST00000588780 NACA2Q9H009 215 aa23.18■■□□□ 1.3
CAPNS1-205ENST00000588780 PRDM16Q9HAZ2 1276 aa23.18■■□□□ 1.3
CAPNS1-205ENST00000588780 PDE11AQ9HCR9 933 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms