RNA–Protein interactions for RNA: ENST00000588749.1

CACTIN-206, Transcript of cactin, spliceosome C complex subunit, humanhuman

TSL 3

Gene CACTIN, Length 391 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-206ENST00000588749 RIF1Q5UIP0 2472 aaKnown RBP15.32■□□□□ 0.04
CACTIN-206ENST00000588749 FAM92AA1XBS5 289 aa15.31■□□□□ 0.04
CACTIN-206ENST00000588749 OTOL1A6NHN0 477 aaPredicted RBP15.31■□□□□ 0.04
CACTIN-206ENST00000588749 HHLA1C9JL84 531 aa15.31■□□□□ 0.04
CACTIN-206ENST00000588749 LEFTY2O00292 366 aa15.31■□□□□ 0.04
CACTIN-206ENST00000588749 P4HA2O15460 535 aa15.31■□□□□ 0.04
CACTIN-206ENST00000588749 AFPP02771 609 aaKnown RBP15.31■□□□□ 0.04
CACTIN-206ENST00000588749 MBL2P11226 248 aaPredicted RBP15.31■□□□□ 0.04
CACTIN-206ENST00000588749 TCF3P15923 654 aa15.31■□□□□ 0.04
CACTIN-206ENST00000588749 ACO1P21399 889 aaKnown RBP15.31■□□□□ 0.04
CACTIN-206ENST00000588749 SLC7A9P82251 487 aa15.31■□□□□ 0.04
CACTIN-206ENST00000588749 ZXDBP98169 803 aa15.31■□□□□ 0.04
CACTIN-206ENST00000588749 HECTD3Q5T447 861 aa15.31■□□□□ 0.04
CACTIN-206ENST00000588749 CREBRFQ8IUR6 639 aa15.31■□□□□ 0.04
CACTIN-206ENST00000588749 PPM1KQ8N3J5 372 aa15.31■□□□□ 0.04
CACTIN-206ENST00000588749 OSCP1Q8WVF1 389 aa15.31■□□□□ 0.04
CACTIN-206ENST00000588749 CNOT6LQ96LI5 555 aaKnown RBP15.31■□□□□ 0.04
CACTIN-206ENST00000588749 IPO9Q96P70 1041 aaKnown RBP15.31■□□□□ 0.04
CACTIN-206ENST00000588749 DUSP16Q9BY84 665 aa15.31■□□□□ 0.04
CACTIN-206ENST00000588749 FBXO44Q9H4M3 255 aa15.31■□□□□ 0.04
CACTIN-206ENST00000588749 CCSER2Q9H7U1 834 aa15.31■□□□□ 0.04
CACTIN-206ENST00000588749 LMAN1LQ9HAT1 526 aa15.31■□□□□ 0.04
CACTIN-206ENST00000588749 PNPLA8Q9NP80 782 aa15.31■□□□□ 0.04
CACTIN-206ENST00000588749 SCAMP3O14828 347 aaKnown RBP15.3■□□□□ 0.04
CACTIN-206ENST00000588749 CYP26A1O43174 497 aa15.3■□□□□ 0.04
CACTIN-206ENST00000588749 COCHO43405 550 aa15.3■□□□□ 0.04
CACTIN-206ENST00000588749 LAMTOR5O43504 91 aa15.3■□□□□ 0.04
CACTIN-206ENST00000588749 ZDHHC11BP0C7U3 371 aa15.3■□□□□ 0.04
CACTIN-206ENST00000588749 CHRNB1P11230 501 aa15.3■□□□□ 0.04
CACTIN-206ENST00000588749 CD19P15391 556 aa15.3■□□□□ 0.04
CACTIN-206ENST00000588749 PON2Q15165 354 aa15.3■□□□□ 0.04
CACTIN-206ENST00000588749 DPCR1Q3MIW9 517 aa15.3■□□□□ 0.04
CACTIN-206ENST00000588749 ARHGAP17Q68EM7 881 aa15.3■□□□□ 0.04
CACTIN-206ENST00000588749 ALYREFQ86V81 257 aaKnown RBP15.3■□□□□ 0.04
CACTIN-206ENST00000588749 CPA6Q8N4T0 437 aa15.3■□□□□ 0.04
CACTIN-206ENST00000588749 UBR7Q8N806 425 aa15.3■□□□□ 0.04
CACTIN-206ENST00000588749 LMO3Q8TAP4 145 aa15.3■□□□□ 0.04
CACTIN-206ENST00000588749 KAT5Q92993 513 aa15.3■□□□□ 0.04
CACTIN-206ENST00000588749 ATP2A3Q93084 1043 aa15.3■□□□□ 0.04
CACTIN-206ENST00000588749 NACA2Q9H009 215 aa15.3■□□□□ 0.04
CACTIN-206ENST00000588749 CHRDQ9H2X0 955 aa15.3■□□□□ 0.04
CACTIN-206ENST00000588749 RBM12Q9NTZ6 932 aaKnown RBP15.3■□□□□ 0.04
CACTIN-206ENST00000588749 CFAP97Q9P2B7 532 aa15.3■□□□□ 0.04
CACTIN-206ENST00000588749 SCML2Q9UQR0 700 aa15.3■□□□□ 0.04
CACTIN-206ENST00000588749 TLR5O60602 858 aa15.29■□□□□ 0.04
CACTIN-206ENST00000588749 HOXD11P31277 338 aaPredicted RBP15.29■□□□□ 0.04
CACTIN-206ENST00000588749 PGFP49763 221 aa15.29■□□□□ 0.04
CACTIN-206ENST00000588749 MRE11P49959 708 aa15.29■□□□□ 0.04
CACTIN-206ENST00000588749 TUBP50607 506 aa15.29■□□□□ 0.04
CACTIN-206ENST00000588749 MTAPQ13126 283 aa15.29■□□□□ 0.04
CACTIN-206ENST00000588749 LRRC32Q14392 662 aa15.29■□□□□ 0.04
CACTIN-206ENST00000588749 TPD52L1Q16890 204 aaPredicted RBP15.29■□□□□ 0.04
CACTIN-206ENST00000588749 GOLGA7BQ2TAP0 167 aa15.29■□□□□ 0.04
CACTIN-206ENST00000588749 EML3Q32P44 896 aa15.29■□□□□ 0.04
CACTIN-206ENST00000588749 SGO2Q562F6 1265 aa15.29■□□□□ 0.04
CACTIN-206ENST00000588749 SNX30Q5VWJ9 437 aa15.29■□□□□ 0.04
CACTIN-206ENST00000588749 TMEM270Q6UE05 265 aa15.29■□□□□ 0.04
CACTIN-206ENST00000588749 ARHGEF19Q8IW93 802 aa15.29■□□□□ 0.04
CACTIN-206ENST00000588749 MAML2Q8IZL2 1156 aaPredicted RBP15.29■□□□□ 0.04
CACTIN-206ENST00000588749 INTS2Q9H0H0 1204 aaKnown RBP15.29■□□□□ 0.04
CACTIN-206ENST00000588749 LINC00597Q9H2U6 94 aa15.29■□□□□ 0.04
CACTIN-206ENST00000588749 ECT2Q9H8V3 914 aa15.29■□□□□ 0.04
CACTIN-206ENST00000588749 TLR8Q9NR97 1041 aaKnown RBP15.29■□□□□ 0.04
CACTIN-206ENST00000588749 PCDHB4Q9Y5E5 795 aa15.29■□□□□ 0.04
CACTIN-206ENST00000588749 GOLGA6L22H0YM25 854 aa15.28■□□□□ 0.04
CACTIN-206ENST00000588749 SP9P0CG40 484 aa15.28■□□□□ 0.04
CACTIN-206ENST00000588749 GJA4P35212 333 aa15.28■□□□□ 0.04
CACTIN-206ENST00000588749 NBL1P41271 181 aa15.28■□□□□ 0.04
CACTIN-206ENST00000588749 KIF11P52732 1056 aa15.28■□□□□ 0.04
CACTIN-206ENST00000588749 SLC8A3P57103 927 aa15.28■□□□□ 0.04
CACTIN-206ENST00000588749 RRAGAQ7L523 313 aa15.28■□□□□ 0.04
CACTIN-206ENST00000588749 PIGZQ86VD9 579 aa15.28■□□□□ 0.04
CACTIN-206ENST00000588749 TTC30AQ86WT1 665 aa15.28■□□□□ 0.04
CACTIN-206ENST00000588749 DDX42Q86XP3 938 aaKnown RBP eCLIP15.28■□□□□ 0.04
CACTIN-206ENST00000588749 ANKRD52Q8NB46 1076 aa15.28■□□□□ 0.04
CACTIN-206ENST00000588749 EHBP1Q8NDI1 1231 aa15.28■□□□□ 0.04
CACTIN-206ENST00000588749 GPT2Q8TD30 523 aa15.28■□□□□ 0.04
CACTIN-206ENST00000588749 CHFRQ96EP1 664 aa15.28■□□□□ 0.04
CACTIN-206ENST00000588749 ZFRQ96KR1 1074 aaKnown RBP15.28■□□□□ 0.04
CACTIN-206ENST00000588749 DACH1Q9UI36 760 aa15.28■□□□□ 0.04
CACTIN-206ENST00000588749 TSPAN16Q9UKR8 245 aa15.28■□□□□ 0.04
CACTIN-206ENST00000588749 FAM186AA6NE01 2351 aa15.28■□□□□ 0.04
CACTIN-206ENST00000588749 ATG2BQ96BY7 2078 aa15.28■□□□□ 0.04
CACTIN-206ENST00000588749 PTPRZ1P23471 2315 aaPredicted RBP15.27■□□□□ 0.04
CACTIN-206ENST00000588749 A0A1W2PQH9 124 aa15.27■□□□□ 0.04
CACTIN-206ENST00000588749 NFATC1O95644 943 aa15.27■□□□□ 0.04
CACTIN-206ENST00000588749 VDRP11473 427 aa15.27■□□□□ 0.04
CACTIN-206ENST00000588749 MTIF2P46199 727 aaKnown RBP15.27■□□□□ 0.04
CACTIN-206ENST00000588749 AMPD2Q01433 879 aa15.27■□□□□ 0.04
CACTIN-206ENST00000588749 GCNT1Q02742 428 aa15.27■□□□□ 0.04
CACTIN-206ENST00000588749 CSTF1Q05048 431 aaKnown RBP15.27■□□□□ 0.04
CACTIN-206ENST00000588749 CCINQ13939 588 aa15.27■□□□□ 0.04
CACTIN-206ENST00000588749 DGKKQ5KSL6 1271 aa15.27■□□□□ 0.04
CACTIN-206ENST00000588749 NAIF1Q69YI7 327 aaPredicted RBP15.27■□□□□ 0.04
CACTIN-206ENST00000588749 Q6ZS52 159 aa15.27■□□□□ 0.04
CACTIN-206ENST00000588749 IRF2BP1Q8IU81 584 aa15.27■□□□□ 0.04
CACTIN-206ENST00000588749 CRACR2AQ9BSW2 395 aa15.27■□□□□ 0.04
CACTIN-206ENST00000588749 IER2Q9BTL4 223 aa15.27■□□□□ 0.04
CACTIN-206ENST00000588749 NMUR1Q9HB89 426 aa15.27■□□□□ 0.04
CACTIN-206ENST00000588749 OSER1Q9NX31 292 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms