RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 HS1BP3Q53T59 392 aa7.49□□□□□ -1.21
TPM4-210ENST00000588507 PLA2G4FQ68DD2 849 aa7.49□□□□□ -1.21
TPM4-210ENST00000588507 ANO5Q75V66 913 aa7.49□□□□□ -1.21
TPM4-210ENST00000588507 FILIP1Q7Z7B0 1213 aa7.49□□□□□ -1.21
TPM4-210ENST00000588507 FAM124AQ86V42 546 aa7.49□□□□□ -1.21
TPM4-210ENST00000588507 ITPRIPQ8IWB1 547 aa7.49□□□□□ -1.21
TPM4-210ENST00000588507 TERB1Q8NA31 727 aa7.49□□□□□ -1.21
TPM4-210ENST00000588507 MAPK15Q8TD08 544 aa7.49□□□□□ -1.21
TPM4-210ENST00000588507 LRRC15Q8TF66 581 aa7.49□□□□□ -1.21
TPM4-210ENST00000588507 PRCCQ92733 491 aaPredicted RBP7.49□□□□□ -1.21
TPM4-210ENST00000588507 SIPA1Q96FS4 1042 aa7.49□□□□□ -1.21
TPM4-210ENST00000588507 SLC22A12Q96S37 553 aa7.49□□□□□ -1.21
TPM4-210ENST00000588507 DHX33Q9H6R0 707 aaKnown RBP7.49□□□□□ -1.21
TPM4-210ENST00000588507 HELLSQ9NRZ9 838 aa7.49□□□□□ -1.21
TPM4-210ENST00000588507 DEC1Q9P2X7 70 aa7.49□□□□□ -1.21
TPM4-210ENST00000588507 GDAQ9Y2T3 454 aa7.49□□□□□ -1.21
TPM4-210ENST00000588507 PCDHB11Q9Y5F2 797 aa7.49□□□□□ -1.21
TPM4-210ENST00000588507 CCDC187A0A096LP49 1063 aa7.48□□□□□ -1.21
TPM4-210ENST00000588507 EFCAB7A8K855 629 aa7.48□□□□□ -1.21
TPM4-210ENST00000588507 TRIM38O00635 465 aa7.48□□□□□ -1.21
TPM4-210ENST00000588507 SLC9A3R1O14745 358 aaPredicted RBP7.48□□□□□ -1.21
TPM4-210ENST00000588507 SMARCA5O60264 1052 aaPredicted RBP7.48□□□□□ -1.21
TPM4-210ENST00000588507 FSBPO95073 299 aa7.48□□□□□ -1.21
TPM4-210ENST00000588507 LARGE1O95461 756 aa7.48□□□□□ -1.21
TPM4-210ENST00000588507 CENPBP07199 599 aaPredicted RBP7.48□□□□□ -1.21
TPM4-210ENST00000588507 P4HBP07237 508 aaKnown RBP7.48□□□□□ -1.21
TPM4-210ENST00000588507 CYP3A4P08684 503 aa7.48□□□□□ -1.21
TPM4-210ENST00000588507 CKMT1AP12532 417 aa7.48□□□□□ -1.21
TPM4-210ENST00000588507 HMGA1P17096 107 aaKnown RBP7.48□□□□□ -1.21
TPM4-210ENST00000588507 RFC5P40937 340 aa7.48□□□□□ -1.21
TPM4-210ENST00000588507 LEPRP48357 1165 aaKnown RBP7.48□□□□□ -1.21
TPM4-210ENST00000588507 BCAT1P54687 386 aa7.48□□□□□ -1.21
TPM4-210ENST00000588507 NPEPPSP55786 919 aa7.48□□□□□ -1.21
TPM4-210ENST00000588507 DMP1Q13316 513 aaPredicted RBP7.48□□□□□ -1.21
TPM4-210ENST00000588507 MRPL49Q13405 166 aaKnown RBP7.48□□□□□ -1.21
TPM4-210ENST00000588507 MYBPC2Q14324 1141 aa7.48□□□□□ -1.21
TPM4-210ENST00000588507 STARD3Q14849 445 aa7.48□□□□□ -1.21
TPM4-210ENST00000588507 FUT11Q495W5 492 aa7.48□□□□□ -1.21
TPM4-210ENST00000588507 BTBD8Q5XKL5 378 aa7.48□□□□□ -1.21
TPM4-210ENST00000588507 TMPRSS6Q8IU80 811 aa7.48□□□□□ -1.21
TPM4-210ENST00000588507 NOSTRINQ8IVI9 506 aa7.48□□□□□ -1.21
TPM4-210ENST00000588507 TEX2Q8IWB9 1127 aa7.48□□□□□ -1.21
TPM4-210ENST00000588507 OXR1Q8N573 874 aa7.48□□□□□ -1.21
TPM4-210ENST00000588507 KIAA1958Q8N8K9 716 aa7.48□□□□□ -1.21
TPM4-210ENST00000588507 ARL14EPQ8N8R7 260 aaPredicted RBP7.48□□□□□ -1.21
TPM4-210ENST00000588507 GLIS1Q8NBF1 620 aa7.48□□□□□ -1.21
TPM4-210ENST00000588507 RDM1Q8NG50 284 aa7.48□□□□□ -1.21
TPM4-210ENST00000588507 HDAC11Q96DB2 347 aa7.48□□□□□ -1.21
TPM4-210ENST00000588507 CATSPER2Q96P56 530 aa7.48□□□□□ -1.21
TPM4-210ENST00000588507 KRT23Q9C075 422 aa7.48□□□□□ -1.21
TPM4-210ENST00000588507 MKRN2Q9H000 416 aaKnown RBP7.48□□□□□ -1.21
TPM4-210ENST00000588507 ARHGAP26Q9UNA1 814 aa7.48□□□□□ -1.21
TPM4-210ENST00000588507 PPME1Q9Y570 386 aa7.48□□□□□ -1.21
TPM4-210ENST00000588507 MYOFQ9NZM1 2061 aa7.48□□□□□ -1.21
TPM4-210ENST00000588507 STK36Q9NRP7 1315 aa7.48□□□□□ -1.21
TPM4-210ENST00000588507 TP53BP1Q12888 1972 aaPredicted RBP7.48□□□□□ -1.21
TPM4-210ENST00000588507 SMIM28A0A1B0GU29 152 aa7.47□□□□□ -1.21
TPM4-210ENST00000588507 TULP3O75386 442 aa7.47□□□□□ -1.21
TPM4-210ENST00000588507 WNT1P04628 370 aa7.47□□□□□ -1.21
TPM4-210ENST00000588507 RPL9P32969 192 aaKnown RBP7.47□□□□□ -1.21
TPM4-210ENST00000588507 PTGER4P35408 488 aa7.47□□□□□ -1.21
TPM4-210ENST00000588507 GRIK1P39086 918 aa7.47□□□□□ -1.21
TPM4-210ENST00000588507 GAD2Q05329 585 aa7.47□□□□□ -1.21
TPM4-210ENST00000588507 NUMA1Q14980 2115 aa7.47□□□□□ -1.21
TPM4-210ENST00000588507 ARMCX5Q6P1M9 558 aa7.47□□□□□ -1.21
TPM4-210ENST00000588507 PPP4R3CPQ6ZMV5 832 aa7.47□□□□□ -1.21
TPM4-210ENST00000588507 MIER3Q7Z3K6 550 aa7.47□□□□□ -1.21
TPM4-210ENST00000588507 TMC6Q7Z403 805 aa7.47□□□□□ -1.21
TPM4-210ENST00000588507 USP37Q86T82 979 aa7.47□□□□□ -1.21
TPM4-210ENST00000588507 TRMT2AQ8IZ69 625 aaKnown RBP7.47□□□□□ -1.21
TPM4-210ENST00000588507 NAT16Q8N8M0 369 aa7.47□□□□□ -1.21
TPM4-210ENST00000588507 CEP170P1Q96L14 293 aa7.47□□□□□ -1.21
TPM4-210ENST00000588507 ORAI3Q9BRQ5 295 aa7.47□□□□□ -1.21
TPM4-210ENST00000588507 GZF1Q9H116 711 aaPredicted RBP7.47□□□□□ -1.21
TPM4-210ENST00000588507 UNC45AQ9H3U1 944 aa7.47□□□□□ -1.21
TPM4-210ENST00000588507 RPF1Q9H9Y2 349 aaKnown RBP7.47□□□□□ -1.21
TPM4-210ENST00000588507 MRS2Q9HD23 443 aa7.47□□□□□ -1.21
TPM4-210ENST00000588507 BMP2KQ9NSY1 1161 aaPredicted RBP7.47□□□□□ -1.21
TPM4-210ENST00000588507 SLC38A7Q9NVC3 462 aa7.47□□□□□ -1.21
TPM4-210ENST00000588507 GCNT4Q9P109 453 aa7.47□□□□□ -1.21
TPM4-210ENST00000588507 SEL1LQ9UBV2 794 aa7.47□□□□□ -1.21
TPM4-210ENST00000588507 MAGED2Q9UNF1 606 aaPredicted RBP7.47□□□□□ -1.21
TPM4-210ENST00000588507 TP53TG5Q9Y2B4 290 aa7.47□□□□□ -1.21
TPM4-210ENST00000588507 TIMM13Q9Y5L4 95 aaPredicted RBP7.47□□□□□ -1.21
TPM4-210ENST00000588507 SHANK1Q9Y566 2161 aa7.47□□□□□ -1.21
TPM4-210ENST00000588507 TCP11X1B4DZS4 312 aa7.46□□□□□ -1.22
TPM4-210ENST00000588507 WASH3PC4AMC7 463 aa7.46□□□□□ -1.22
TPM4-210ENST00000588507 LEFTY2O00292 366 aa7.46□□□□□ -1.22
TPM4-210ENST00000588507 PPP1R37O75864 691 aa7.46□□□□□ -1.22
TPM4-210ENST00000588507 CALM1P0DP23 149 aa7.46□□□□□ -1.22
TPM4-210ENST00000588507 CALM2P0DP24 149 aa7.46□□□□□ -1.22
TPM4-210ENST00000588507 CALM3P0DP25 149 aa7.46□□□□□ -1.22
TPM4-210ENST00000588507 HDCP19113 662 aa7.46□□□□□ -1.22
TPM4-210ENST00000588507 ACSL1P33121 698 aa7.46□□□□□ -1.22
TPM4-210ENST00000588507 ZNF132P52740 706 aa7.46□□□□□ -1.22
TPM4-210ENST00000588507 LTBQ06643 244 aa7.46□□□□□ -1.22
TPM4-210ENST00000588507 AP3B2Q13367 1082 aa7.46□□□□□ -1.22
TPM4-210ENST00000588507 KCNB1Q14721 858 aa7.46□□□□□ -1.22
TPM4-210ENST00000588507 MCMDC2Q4G0Z9 681 aa7.46□□□□□ -1.22
TPM4-210ENST00000588507 PRR16Q569H4 304 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms