RNA–Protein interactions for RNA: ENST00000588423.1

RETREG3-206, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 559 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-206ENST00000588423 HESX1Q9UBX0 185 aa16.95■□□□□ 0.3
RETREG3-206ENST00000588423 CHORDC1Q9UHD1 332 aaPredicted RBP16.95■□□□□ 0.3
RETREG3-206ENST00000588423 TSPAN16Q9UKR8 245 aa16.95■□□□□ 0.3
RETREG3-206ENST00000588423 MRPS17Q9Y2R5 130 aaKnown RBP16.95■□□□□ 0.3
RETREG3-206ENST00000588423 SIT1Q9Y3P8 196 aa16.95■□□□□ 0.3
RETREG3-206ENST00000588423 USP3Q9Y6I4 520 aa16.95■□□□□ 0.3
RETREG3-206ENST00000588423 KIF26AQ9ULI4 1882 aaPredicted RBP16.95■□□□□ 0.3
RETREG3-206ENST00000588423 SHISA7A6NL88 538 aa16.94■□□□□ 0.3
RETREG3-206ENST00000588423 RNF225M0QZC1 329 aaPredicted RBP16.94■□□□□ 0.3
RETREG3-206ENST00000588423 O00370 1275 aa16.94■□□□□ 0.3
RETREG3-206ENST00000588423 XPO1O14980 1071 aaKnown RBP16.94■□□□□ 0.3
RETREG3-206ENST00000588423 PI15O43692 258 aa16.94■□□□□ 0.3
RETREG3-206ENST00000588423 ABL1P00519 1130 aa16.94■□□□□ 0.3
RETREG3-206ENST00000588423 CD19P15391 556 aa16.94■□□□□ 0.3
RETREG3-206ENST00000588423 SLC9A1P19634 815 aa16.94■□□□□ 0.3
RETREG3-206ENST00000588423 BST2Q10589 180 aaKnown RBP16.94■□□□□ 0.3
RETREG3-206ENST00000588423 PDGFRLQ15198 375 aa16.94■□□□□ 0.3
RETREG3-206ENST00000588423 GOLGA7BQ2TAP0 167 aa16.94■□□□□ 0.3
RETREG3-206ENST00000588423 RAB41Q5JT25 222 aa16.94■□□□□ 0.3
RETREG3-206ENST00000588423 HECTD3Q5T447 861 aa16.94■□□□□ 0.3
RETREG3-206ENST00000588423 CDKAL1Q5VV42 579 aa16.94■□□□□ 0.3
RETREG3-206ENST00000588423 CC2D1AQ6P1N0 951 aaPredicted RBP16.94■□□□□ 0.3
RETREG3-206ENST00000588423 LCLAT1Q6UWP7 414 aa16.94■□□□□ 0.3
RETREG3-206ENST00000588423 CCDC186Q7Z3E2 898 aa16.94■□□□□ 0.3
RETREG3-206ENST00000588423 DDX42Q86XP3 938 aaKnown RBP eCLIP16.94■□□□□ 0.3
RETREG3-206ENST00000588423 RBBP8NLQ8NC74 664 aaPredicted RBP16.94■□□□□ 0.3
RETREG3-206ENST00000588423 SH3RF2Q8TEC5 729 aa16.94■□□□□ 0.3
RETREG3-206ENST00000588423 ZFYVE19Q96K21 471 aa16.94■□□□□ 0.3
RETREG3-206ENST00000588423 CRACR2AQ9BSW2 395 aa16.94■□□□□ 0.3
RETREG3-206ENST00000588423 GKN1Q9NS71 199 aa16.94■□□□□ 0.3
RETREG3-206ENST00000588423 APEX2Q9UBZ4 518 aa16.94■□□□□ 0.3
RETREG3-206ENST00000588423 PIAS3Q9Y6X2 628 aa16.94■□□□□ 0.3
RETREG3-206ENST00000588423 ANAPC1Q9H1A4 1944 aa16.94■□□□□ 0.3
RETREG3-206ENST00000588423 COCHO43405 550 aa16.93■□□□□ 0.3
RETREG3-206ENST00000588423 GALR2O43603 387 aaPredicted RBP16.93■□□□□ 0.3
RETREG3-206ENST00000588423 SETSIPP0DME0 302 aa16.93■□□□□ 0.3
RETREG3-206ENST00000588423 PTMSP20962 102 aa16.93■□□□□ 0.3
RETREG3-206ENST00000588423 PON1P27169 355 aa16.93■□□□□ 0.3
RETREG3-206ENST00000588423 MAGEA9P43362 315 aa16.93■□□□□ 0.3
RETREG3-206ENST00000588423 PSEN1P49768 467 aa16.93■□□□□ 0.3
RETREG3-206ENST00000588423 ZXDBP98169 803 aa16.93■□□□□ 0.3
RETREG3-206ENST00000588423 CNGA2Q16280 664 aa16.93■□□□□ 0.3
RETREG3-206ENST00000588423 PKDCCQ504Y2 493 aa16.93■□□□□ 0.3
RETREG3-206ENST00000588423 C11orf57Q6ZUT1 292 aaPredicted RBP16.93■□□□□ 0.3
RETREG3-206ENST00000588423 PIGZQ86VD9 579 aa16.93■□□□□ 0.3
RETREG3-206ENST00000588423 RALGPS2Q86X27 583 aaPredicted RBP16.93■□□□□ 0.3
RETREG3-206ENST00000588423 ZNF276Q8N554 614 aa16.93■□□□□ 0.3
RETREG3-206ENST00000588423 OSCP1Q8WVF1 389 aa16.93■□□□□ 0.3
RETREG3-206ENST00000588423 FOXQ1Q9C009 403 aa16.93■□□□□ 0.3
RETREG3-206ENST00000588423 CYLDQ9NQC7 956 aa16.93■□□□□ 0.3
RETREG3-206ENST00000588423 DLGAP2Q9P1A6 1054 aa16.93■□□□□ 0.3
RETREG3-206ENST00000588423 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.93■□□□□ 0.3
RETREG3-206ENST00000588423 CPQQ9Y646 472 aa16.93■□□□□ 0.3
RETREG3-206ENST00000588423 ZNF638Q14966 1978 aaKnown RBP16.93■□□□□ 0.3
RETREG3-206ENST00000588423 FAM170BA6NMN3 283 aa16.92■□□□□ 0.3
RETREG3-206ENST00000588423 LEFTY2O00292 366 aa16.92■□□□□ 0.3
RETREG3-206ENST00000588423 NCAM2O15394 837 aa16.92■□□□□ 0.3
RETREG3-206ENST00000588423 CYP26A1O43174 497 aa16.92■□□□□ 0.3
RETREG3-206ENST00000588423 PLA2G4AP47712 749 aa16.92■□□□□ 0.3
RETREG3-206ENST00000588423 KPNA1P52294 538 aaPredicted RBP16.92■□□□□ 0.3
RETREG3-206ENST00000588423 MYL5Q02045 173 aa16.92■□□□□ 0.3
RETREG3-206ENST00000588423 TYRO3Q06418 890 aa16.92■□□□□ 0.3
RETREG3-206ENST00000588423 PDE4CQ08493 712 aa16.92■□□□□ 0.3
RETREG3-206ENST00000588423 RUNX3Q13761 415 aa16.92■□□□□ 0.3
RETREG3-206ENST00000588423 UBXN2BQ14CS0 331 aa16.92■□□□□ 0.3
RETREG3-206ENST00000588423 MEA1Q16626 185 aa16.92■□□□□ 0.3
RETREG3-206ENST00000588423 ITPRIPL2Q3MIP1 535 aa16.92■□□□□ 0.3
RETREG3-206ENST00000588423 HSP90AA4PQ58FG1 418 aa16.92■□□□□ 0.3
RETREG3-206ENST00000588423 CCDC105Q8IYK2 499 aa16.92■□□□□ 0.3
RETREG3-206ENST00000588423 KCTD13Q8WZ19 329 aa16.92■□□□□ 0.3
RETREG3-206ENST00000588423 TFAP2BQ92481 460 aa16.92■□□□□ 0.3
RETREG3-206ENST00000588423 FAM3CQ92520 227 aa16.92■□□□□ 0.3
RETREG3-206ENST00000588423 HPS4Q9NQG7 708 aa16.92■□□□□ 0.3
RETREG3-206ENST00000588423 DUS2Q9NX74 493 aaKnown RBP16.92■□□□□ 0.3
RETREG3-206ENST00000588423 GTSE1Q9NYZ3 720 aa16.92■□□□□ 0.3
RETREG3-206ENST00000588423 RAPGEFL1Q9UHV5 662 aa16.92■□□□□ 0.3
RETREG3-206ENST00000588423 TLR5O60602 858 aa16.91■□□□□ 0.3
RETREG3-206ENST00000588423 MBL2P11226 248 aaPredicted RBP16.91■□□□□ 0.3
RETREG3-206ENST00000588423 TARSP26639 723 aaKnown RBP16.91■□□□□ 0.3
RETREG3-206ENST00000588423 CTHP32929 405 aa16.91■□□□□ 0.3
RETREG3-206ENST00000588423 RPS9P46781 194 aaKnown RBP16.91■□□□□ 0.3
RETREG3-206ENST00000588423 TNK2Q07912 1038 aa16.91■□□□□ 0.3
RETREG3-206ENST00000588423 KLHL40Q2TBA0 621 aa16.91■□□□□ 0.3
RETREG3-206ENST00000588423 PM20D1Q6GTS8 502 aa16.91■□□□□ 0.3
RETREG3-206ENST00000588423 CAVIN1Q6NZI2 390 aaKnown RBP16.91■□□□□ 0.3
RETREG3-206ENST00000588423 KLHDC10Q6PID8 442 aa16.91■□□□□ 0.3
RETREG3-206ENST00000588423 ZNF687Q8N1G0 1237 aa16.91■□□□□ 0.3
RETREG3-206ENST00000588423 SCML4Q8N228 414 aa16.91■□□□□ 0.3
RETREG3-206ENST00000588423 ARHGAP18Q8N392 663 aa16.91■□□□□ 0.3
RETREG3-206ENST00000588423 DTWD2Q8NBA8 298 aa16.91■□□□□ 0.3
RETREG3-206ENST00000588423 PRSS33Q8NF86 280 aa16.91■□□□□ 0.3
RETREG3-206ENST00000588423 ATP2A3Q93084 1043 aa16.91■□□□□ 0.3
RETREG3-206ENST00000588423 CLDN23Q96B33 292 aa16.91■□□□□ 0.3
RETREG3-206ENST00000588423 ZFRQ96KR1 1074 aaKnown RBP16.91■□□□□ 0.3
RETREG3-206ENST00000588423 CDK5RAP1Q96SZ6 601 aaKnown RBP16.91■□□□□ 0.3
RETREG3-206ENST00000588423 ZSWIM1Q9BR11 485 aa16.91■□□□□ 0.3
RETREG3-206ENST00000588423 IRF2BPLQ9H1B7 796 aa16.91■□□□□ 0.3
RETREG3-206ENST00000588423 CCSER2Q9H7U1 834 aa16.91■□□□□ 0.3
RETREG3-206ENST00000588423 SIX2Q9NPC8 291 aa16.91■□□□□ 0.3
RETREG3-206ENST00000588423 CLIC5Q9NZA1 410 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms