RNA–Protein interactions for RNA: ENST00000588030.5

CIRBP-215, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CIRBP, Length 1,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-215ENST00000588030 TDP1Q9NUW8 608 aa20.91■□□□□ 0.94
CIRBP-215ENST00000588030 PIAS3Q9Y6X2 628 aa20.91■□□□□ 0.94
CIRBP-215ENST00000588030 NUP210Q8TEM1 1887 aaPredicted RBP20.9■□□□□ 0.94
CIRBP-215ENST00000588030 CACNA1IQ9P0X4 2223 aa20.9■□□□□ 0.94
CIRBP-215ENST00000588030 RNF225M0QZC1 329 aaPredicted RBP20.9■□□□□ 0.94
CIRBP-215ENST00000588030 HDCP19113 662 aa20.9■□□□□ 0.94
CIRBP-215ENST00000588030 EEF1GP26641 437 aaKnown RBP20.9■□□□□ 0.94
CIRBP-215ENST00000588030 PON1P27169 355 aa20.9■□□□□ 0.94
CIRBP-215ENST00000588030 MLLT6P55198 1093 aaPredicted RBP20.9■□□□□ 0.94
CIRBP-215ENST00000588030 KLHL40Q2TBA0 621 aa20.9■□□□□ 0.94
CIRBP-215ENST00000588030 ANO6Q4KMQ2 910 aa20.9■□□□□ 0.94
CIRBP-215ENST00000588030 ARHGAP17Q68EM7 881 aa20.9■□□□□ 0.94
CIRBP-215ENST00000588030 RBBP8NLQ8NC74 664 aaPredicted RBP20.9■□□□□ 0.94
CIRBP-215ENST00000588030 RIN3Q8TB24 985 aa20.9■□□□□ 0.94
CIRBP-215ENST00000588030 FAM3CQ92520 227 aa20.9■□□□□ 0.94
CIRBP-215ENST00000588030 GMIPQ9P107 970 aa20.9■□□□□ 0.94
CIRBP-215ENST00000588030 TSPAN16Q9UKR8 245 aa20.9■□□□□ 0.94
CIRBP-215ENST00000588030 MRPS17Q9Y2R5 130 aaKnown RBP20.9■□□□□ 0.94
CIRBP-215ENST00000588030 USP17L7P0C7H9 530 aa20.89■□□□□ 0.94
CIRBP-215ENST00000588030 MYL5Q02045 173 aa20.89■□□□□ 0.94
CIRBP-215ENST00000588030 ARHGAP44Q17R89 818 aa20.89■□□□□ 0.94
CIRBP-215ENST00000588030 MAML2Q8IZL2 1156 aaPredicted RBP20.89■□□□□ 0.94
CIRBP-215ENST00000588030 TTC8Q8TAM2 541 aa20.89■□□□□ 0.94
CIRBP-215ENST00000588030 CSGALNACT1Q8TDX6 532 aa20.89■□□□□ 0.94
CIRBP-215ENST00000588030 ANAPC1Q9H1A4 1944 aa20.89■□□□□ 0.94
CIRBP-215ENST00000588030 GKN1Q9NS71 199 aa20.89■□□□□ 0.94
CIRBP-215ENST00000588030 GTSE1Q9NYZ3 720 aa20.89■□□□□ 0.94
CIRBP-215ENST00000588030 HHLA1C9JL84 531 aa20.88■□□□□ 0.93
CIRBP-215ENST00000588030 PROB1E7EW31 1015 aa20.88■□□□□ 0.93
CIRBP-215ENST00000588030 VDRP11473 427 aa20.88■□□□□ 0.93
CIRBP-215ENST00000588030 USP8P40818 1118 aa20.88■□□□□ 0.93
CIRBP-215ENST00000588030 NBL1P41271 181 aa20.88■□□□□ 0.93
CIRBP-215ENST00000588030 SOX9P48436 509 aa20.88■□□□□ 0.93
CIRBP-215ENST00000588030 PPP3CCP48454 512 aa20.88■□□□□ 0.93
CIRBP-215ENST00000588030 MFAP3P55082 362 aa20.88■□□□□ 0.93
CIRBP-215ENST00000588030 SLC8A3P57103 927 aa20.88■□□□□ 0.93
CIRBP-215ENST00000588030 TNK2Q07912 1038 aa20.88■□□□□ 0.93
CIRBP-215ENST00000588030 CDKAL1Q5VV42 579 aa20.88■□□□□ 0.93
CIRBP-215ENST00000588030 AOPEPQ8N6M6 819 aa20.88■□□□□ 0.93
CIRBP-215ENST00000588030 ANKRD52Q8NB46 1076 aa20.88■□□□□ 0.93
CIRBP-215ENST00000588030 UBA3Q8TBC4 463 aa20.88■□□□□ 0.93
CIRBP-215ENST00000588030 TFAP2BQ92481 460 aa20.88■□□□□ 0.93
CIRBP-215ENST00000588030 FAM83CQ9BQN1 747 aa20.88■□□□□ 0.93
CIRBP-215ENST00000588030 VPS16Q9H269 839 aa20.88■□□□□ 0.93
CIRBP-215ENST00000588030 FBXO44Q9H4M3 255 aa20.88■□□□□ 0.93
CIRBP-215ENST00000588030 HESX1Q9UBX0 185 aa20.88■□□□□ 0.93
CIRBP-215ENST00000588030 APEX2Q9UBZ4 518 aa20.88■□□□□ 0.93
CIRBP-215ENST00000588030 NDRG2Q9UN36 371 aaKnown RBP20.88■□□□□ 0.93
CIRBP-215ENST00000588030 GTPBP10A4D1E9 387 aaKnown RBP20.88■□□□□ 0.93
CIRBP-215ENST00000588030 NCAM2O15394 837 aa20.88■□□□□ 0.93
CIRBP-215ENST00000588030 CYP26A1O43174 497 aa20.88■□□□□ 0.93
CIRBP-215ENST00000588030 PAEPP09466 180 aa20.88■□□□□ 0.93
CIRBP-215ENST00000588030 BRD2P25440 801 aaKnown RBP20.88■□□□□ 0.93
CIRBP-215ENST00000588030 ZNF268Q14587 947 aaPredicted RBP20.88■□□□□ 0.93
CIRBP-215ENST00000588030 KRT31Q15323 416 aa20.88■□□□□ 0.93
CIRBP-215ENST00000588030 TTC30AQ86WT1 665 aa20.88■□□□□ 0.93
CIRBP-215ENST00000588030 PDZD8Q8NEN9 1154 aa20.88■□□□□ 0.93
CIRBP-215ENST00000588030 NAT10Q9H0A0 1025 aaKnown RBP20.88■□□□□ 0.93
CIRBP-215ENST00000588030 RNF38Q9H0F5 515 aa20.88■□□□□ 0.93
CIRBP-215ENST00000588030 THG1LQ9NWX6 298 aaKnown RBP20.88■□□□□ 0.93
CIRBP-215ENST00000588030 SMPD4Q9NXE4 827 aa20.88■□□□□ 0.93
CIRBP-215ENST00000588030 SYCE3A1L190 88 aa20.87■□□□□ 0.93
CIRBP-215ENST00000588030 O00370 1275 aa20.87■□□□□ 0.93
CIRBP-215ENST00000588030 TPM2P07951 284 aa20.87■□□□□ 0.93
CIRBP-215ENST00000588030 PTMSP20962 102 aa20.87■□□□□ 0.93
CIRBP-215ENST00000588030 RPS9P46781 194 aaKnown RBP20.87■□□□□ 0.93
CIRBP-215ENST00000588030 KPNA1P52294 538 aaPredicted RBP20.87■□□□□ 0.93
CIRBP-215ENST00000588030 PLCB2Q00722 1185 aa20.87■□□□□ 0.93
CIRBP-215ENST00000588030 PIGZQ86VD9 579 aa20.87■□□□□ 0.93
CIRBP-215ENST00000588030 OVCA2Q8WZ82 227 aa20.87■□□□□ 0.93
CIRBP-215ENST00000588030 C8orf33Q9H7E9 229 aaPredicted RBP20.87■□□□□ 0.93
CIRBP-215ENST00000588030 PNPLA8Q9NP80 782 aa20.87■□□□□ 0.93
CIRBP-215ENST00000588030 COMMD8Q9NX08 183 aa20.87■□□□□ 0.93
CIRBP-215ENST00000588030 IL37Q9NZH6 218 aa20.87■□□□□ 0.93
CIRBP-215ENST00000588030 KIAA1257Q9ULG3 409 aa20.87■□□□□ 0.93
CIRBP-215ENST00000588030 COL4A2P08572 1712 aa20.86■□□□□ 0.93
CIRBP-215ENST00000588030 TULP2O00295 520 aa20.86■□□□□ 0.93
CIRBP-215ENST00000588030 MBL2P11226 248 aaPredicted RBP20.86■□□□□ 0.93
CIRBP-215ENST00000588030 CDK11BP21127 795 aaKnown RBP20.86■□□□□ 0.93
CIRBP-215ENST00000588030 MAGEA9P43362 315 aa20.86■□□□□ 0.93
CIRBP-215ENST00000588030 PGFP49763 221 aa20.86■□□□□ 0.93
CIRBP-215ENST00000588030 PDE6CP51160 858 aa20.86■□□□□ 0.93
CIRBP-215ENST00000588030 BCAT1P54687 386 aa20.86■□□□□ 0.93
CIRBP-215ENST00000588030 PDE4CQ08493 712 aa20.86■□□□□ 0.93
CIRBP-215ENST00000588030 CC2D1AQ6P1N0 951 aaPredicted RBP20.86■□□□□ 0.93
CIRBP-215ENST00000588030 TXNDC11Q6PKC3 985 aa20.86■□□□□ 0.93
CIRBP-215ENST00000588030 ENOSF1Q7L5Y1 443 aa20.86■□□□□ 0.93
CIRBP-215ENST00000588030 ZSWIM1Q9BR11 485 aa20.86■□□□□ 0.93
CIRBP-215ENST00000588030 NACA2Q9H009 215 aa20.86■□□□□ 0.93
CIRBP-215ENST00000588030 CCSER2Q9H7U1 834 aa20.86■□□□□ 0.93
CIRBP-215ENST00000588030 KIF9Q9HAQ2 790 aa20.86■□□□□ 0.93
CIRBP-215ENST00000588030 LMAN1LQ9HAT1 526 aa20.86■□□□□ 0.93
CIRBP-215ENST00000588030 SIX2Q9NPC8 291 aa20.86■□□□□ 0.93
CIRBP-215ENST00000588030 SPATA6Q9NWH7 488 aaPredicted RBP20.86■□□□□ 0.93
CIRBP-215ENST00000588030 ZFHX2Q9C0A1 2572 aaPredicted RBP20.86■□□□□ 0.93
CIRBP-215ENST00000588030 DMDP11532 3685 aa20.86■□□□□ 0.93
CIRBP-215ENST00000588030 MYO16Q9Y6X6 1858 aa20.85■□□□□ 0.93
CIRBP-215ENST00000588030 PATJQ8NI35 1801 aa20.85■□□□□ 0.93
CIRBP-215ENST00000588030 SPECC1L-ADORA2AF8WAN1 911 aa20.85■□□□□ 0.93
CIRBP-215ENST00000588030 M0QYV0 167 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms