RNA–Protein interactions for RNA: ENST00000587171.1

H3F3B-205, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-205ENST00000587171 PCDHA5Q9Y5H7 936 aa13.97□□□□□ -0.17
H3F3B-205ENST00000587171 CPQQ9Y646 472 aa13.97□□□□□ -0.17
H3F3B-205ENST00000587171 LAMA1P25391 3075 aa13.96□□□□□ -0.17
H3F3B-205ENST00000587171 CILPO75339 1184 aa13.96□□□□□ -0.17
H3F3B-205ENST00000587171 BEST1O76090 585 aa13.96□□□□□ -0.17
H3F3B-205ENST00000587171 SMC2O95347 1197 aa13.96□□□□□ -0.17
H3F3B-205ENST00000587171 NFATC1O95644 943 aa13.96□□□□□ -0.17
H3F3B-205ENST00000587171 EGFP01133 1207 aa13.96□□□□□ -0.17
H3F3B-205ENST00000587171 ZDHHC11BP0C7U3 371 aa13.96□□□□□ -0.17
H3F3B-205ENST00000587171 EPB41P11171 864 aaKnown RBP13.96□□□□□ -0.17
H3F3B-205ENST00000587171 MXI1P50539 228 aa13.96□□□□□ -0.17
H3F3B-205ENST00000587171 TUBP50607 506 aa13.96□□□□□ -0.17
H3F3B-205ENST00000587171 DMWDQ09019 674 aa13.96□□□□□ -0.17
H3F3B-205ENST00000587171 NR1H3Q13133 447 aa13.96□□□□□ -0.17
H3F3B-205ENST00000587171 WHAMMQ8TF30 809 aa13.96□□□□□ -0.17
H3F3B-205ENST00000587171 SEMA4DQ92854 862 aa13.96□□□□□ -0.17
H3F3B-205ENST00000587171 ERCC4Q92889 916 aaPredicted RBP13.96□□□□□ -0.17
H3F3B-205ENST00000587171 SMARCE1Q969G3 411 aa13.96□□□□□ -0.17
H3F3B-205ENST00000587171 EXOC4Q96A65 974 aa13.96□□□□□ -0.17
H3F3B-205ENST00000587171 FAXDC2Q96IV6 333 aa13.96□□□□□ -0.17
H3F3B-205ENST00000587171 HNRNPABQ99729 332 aaKnown RBP13.96□□□□□ -0.17
H3F3B-205ENST00000587171 HINFPQ9BQA5 517 aa13.96□□□□□ -0.17
H3F3B-205ENST00000587171 NT5C1AQ9BXI3 368 aa13.96□□□□□ -0.17
H3F3B-205ENST00000587171 GTPBP4Q9BZE4 634 aaKnown RBP13.96□□□□□ -0.17
H3F3B-205ENST00000587171 SMPD4Q9NXE4 827 aa13.96□□□□□ -0.17
H3F3B-205ENST00000587171 CHURC1-FNTBB4DL54 471 aa13.95□□□□□ -0.18
H3F3B-205ENST00000587171 SLC16A3O15427 465 aaKnown RBP13.95□□□□□ -0.18
H3F3B-205ENST00000587171 COCHO43405 550 aa13.95□□□□□ -0.18
H3F3B-205ENST00000587171 ATG13O75143 517 aa13.95□□□□□ -0.18
H3F3B-205ENST00000587171 RNF40O75150 1001 aa13.95□□□□□ -0.18
H3F3B-205ENST00000587171 FAM200BP0CF97 657 aa13.95□□□□□ -0.18
H3F3B-205ENST00000587171 MBL2P11226 248 aaPredicted RBP13.95□□□□□ -0.18
H3F3B-205ENST00000587171 TRIM21P19474 475 aaKnown RBP13.95□□□□□ -0.18
H3F3B-205ENST00000587171 FNTBP49356 437 aa13.95□□□□□ -0.18
H3F3B-205ENST00000587171 PMS1P54277 932 aaKnown RBP13.95□□□□□ -0.18
H3F3B-205ENST00000587171 MAP3K7CLP57077 242 aa13.95□□□□□ -0.18
H3F3B-205ENST00000587171 FBXO43Q4G163 708 aa13.95□□□□□ -0.18
H3F3B-205ENST00000587171 HECTD3Q5T447 861 aa13.95□□□□□ -0.18
H3F3B-205ENST00000587171 CLEC20AQ6ZU45 233 aa13.95□□□□□ -0.18
H3F3B-205ENST00000587171 FILIP1Q7Z7B0 1213 aa13.95□□□□□ -0.18
H3F3B-205ENST00000587171 LONP2Q86WA8 852 aa13.95□□□□□ -0.18
H3F3B-205ENST00000587171 DDX42Q86XP3 938 aaKnown RBP eCLIP13.95□□□□□ -0.184e-9■□□□□ 9.6
H3F3B-205ENST00000587171 ELOA2Q8IYF1 753 aaPredicted RBP13.95□□□□□ -0.18
H3F3B-205ENST00000587171 KIAA2013Q8IYS2 634 aa13.95□□□□□ -0.18
H3F3B-205ENST00000587171 CCDC150Q8NCX0 1101 aa13.95□□□□□ -0.18
H3F3B-205ENST00000587171 FBXL13Q8NEE6 735 aa13.95□□□□□ -0.18
H3F3B-205ENST00000587171 EZH1Q92800 747 aaPredicted RBP13.95□□□□□ -0.18
H3F3B-205ENST00000587171 CD101Q93033 1021 aa13.95□□□□□ -0.18
H3F3B-205ENST00000587171 ZFRQ96KR1 1074 aaKnown RBP13.95□□□□□ -0.18
H3F3B-205ENST00000587171 TSG101Q99816 390 aa13.95□□□□□ -0.18
H3F3B-205ENST00000587171 FBXO44Q9H4M3 255 aa13.95□□□□□ -0.18
H3F3B-205ENST00000587171 GMIPQ9P107 970 aa13.95□□□□□ -0.18
H3F3B-205ENST00000587171 NCDNQ9UBB6 729 aa13.95□□□□□ -0.18
H3F3B-205ENST00000587171 CHORDC1Q9UHD1 332 aaPredicted RBP13.95□□□□□ -0.18
H3F3B-205ENST00000587171 HOOK1Q9UJC3 728 aaKnown RBP13.95□□□□□ -0.18
H3F3B-205ENST00000587171 HHLA1C9JL84 531 aa13.94□□□□□ -0.18
H3F3B-205ENST00000587171 SLC9A3R1O14745 358 aaPredicted RBP13.94□□□□□ -0.18
H3F3B-205ENST00000587171 STX10O60499 249 aa13.94□□□□□ -0.18
H3F3B-205ENST00000587171 CYP17A1P05093 508 aa13.94□□□□□ -0.18
H3F3B-205ENST00000587171 CD58P19256 250 aa13.94□□□□□ -0.18
H3F3B-205ENST00000587171 ADORA2BP29275 332 aa13.94□□□□□ -0.18
H3F3B-205ENST00000587171 HOXC13P31276 330 aa13.94□□□□□ -0.18
H3F3B-205ENST00000587171 CNR2P34972 360 aa13.94□□□□□ -0.18
H3F3B-205ENST00000587171 OPRD1P41143 372 aa13.94□□□□□ -0.18
H3F3B-205ENST00000587171 FKBP3Q00688 224 aaKnown RBP13.94□□□□□ -0.18
H3F3B-205ENST00000587171 LRRC63Q05C16 580 aa13.94□□□□□ -0.18
H3F3B-205ENST00000587171 GAB4Q2WGN9 574 aa13.94□□□□□ -0.18
H3F3B-205ENST00000587171 ANKRD40Q6AI12 368 aa13.94□□□□□ -0.18
H3F3B-205ENST00000587171 ADGRG2Q8IZP9 1017 aa13.94□□□□□ -0.18
H3F3B-205ENST00000587171 CYFIP2Q96F07 1278 aa13.94□□□□□ -0.18
H3F3B-205ENST00000587171 FAM124BQ9H5Z6 455 aaPredicted RBP13.94□□□□□ -0.18
H3F3B-205ENST00000587171 CCSER2Q9H7U1 834 aa13.94□□□□□ -0.18
H3F3B-205ENST00000587171 PNPLA8Q9NP80 782 aa13.94□□□□□ -0.18
H3F3B-205ENST00000587171 RAB20Q9NX57 234 aa13.94□□□□□ -0.18
H3F3B-205ENST00000587171 CFAP97Q9P2B7 532 aa13.94□□□□□ -0.18
H3F3B-205ENST00000587171 E2F8A0AVK6 867 aa13.93□□□□□ -0.18
H3F3B-205ENST00000587171 TRIM49BA6NDI0 452 aa13.93□□□□□ -0.18
H3F3B-205ENST00000587171 HRO43593 1189 aa13.93□□□□□ -0.18
H3F3B-205ENST00000587171 PGFP49763 221 aa13.93□□□□□ -0.18
H3F3B-205ENST00000587171 DHCR24Q15392 516 aa13.93□□□□□ -0.18
H3F3B-205ENST00000587171 HEATR6Q6AI08 1181 aaKnown RBP13.93□□□□□ -0.18
H3F3B-205ENST00000587171 GPRIN1Q7Z2K8 1008 aa13.93□□□□□ -0.18
H3F3B-205ENST00000587171 WDR5BQ86VZ2 330 aa13.93□□□□□ -0.18
H3F3B-205ENST00000587171 TTC39CQ8N584 583 aa13.93□□□□□ -0.18
H3F3B-205ENST00000587171 SECISBP2LQ93073 1101 aaKnown RBP13.93□□□□□ -0.18
H3F3B-205ENST00000587171 DUSP9Q99956 384 aaKnown RBP13.93□□□□□ -0.18
H3F3B-205ENST00000587171 COQ4Q9Y3A0 265 aa13.93□□□□□ -0.18
H3F3B-205ENST00000587171 NCOR2Q9Y618 2525 aa13.93□□□□□ -0.18
H3F3B-205ENST00000587171 CNOT1A5YKK6 2376 aaKnown RBP13.93□□□□□ -0.18
H3F3B-205ENST00000587171 CCDC163A0A0D9SF12 145 aa13.92□□□□□ -0.18
H3F3B-205ENST00000587171 PSMA7O14818 248 aa13.92□□□□□ -0.18
H3F3B-205ENST00000587171 SCAMP3O14828 347 aaKnown RBP13.92□□□□□ -0.18
H3F3B-205ENST00000587171 TLR5O60602 858 aa13.92□□□□□ -0.18
H3F3B-205ENST00000587171 ID4P47928 161 aa13.92□□□□□ -0.18
H3F3B-205ENST00000587171 SRSF5Q13243 272 aaKnown RBP13.92□□□□□ -0.18
H3F3B-205ENST00000587171 SIM2Q14190 667 aaPredicted RBP13.92□□□□□ -0.18
H3F3B-205ENST00000587171 CBWD6Q4V339 395 aa13.92□□□□□ -0.18
H3F3B-205ENST00000587171 ZNF394Q53GI3 561 aa13.92□□□□□ -0.18
H3F3B-205ENST00000587171 DCAF17Q5H9S7 520 aaPredicted RBP13.92□□□□□ -0.18
H3F3B-205ENST00000587171 CBWD3Q5JTY5 395 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms