RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 PCYOX1Q9UHG3 505 aa10.91□□□□□ -0.66
LIG3-203ENST00000585370 DMGDHQ9UI17 866 aaKnown RBP10.91□□□□□ -0.66
LIG3-203ENST00000585370 UTP11Q9Y3A2 253 aaKnown RBP10.91□□□□□ -0.66
LIG3-203ENST00000585370 FAM170AA1A519 330 aa10.9□□□□□ -0.66
LIG3-203ENST00000585370 MEIS3P2A8K0S8 358 aa10.9□□□□□ -0.66
LIG3-203ENST00000585370 BHMG1C9JSJ3 638 aaPredicted RBP10.9□□□□□ -0.66
LIG3-203ENST00000585370 M0QZQ0 153 aa10.9□□□□□ -0.66
LIG3-203ENST00000585370 DPYSL4O14531 572 aa10.9□□□□□ -0.66
LIG3-203ENST00000585370 ENPP3O14638 875 aa10.9□□□□□ -0.66
LIG3-203ENST00000585370 RAD51CO43502 376 aa10.9□□□□□ -0.66
LIG3-203ENST00000585370 RRP9O43818 475 aaKnown RBP10.9□□□□□ -0.66
LIG3-203ENST00000585370 GPD1P21695 349 aa10.9□□□□□ -0.66
LIG3-203ENST00000585370 LMO2P25791 158 aa10.9□□□□□ -0.66
LIG3-203ENST00000585370 PLA2G4AP47712 749 aa10.9□□□□□ -0.66
LIG3-203ENST00000585370 LMNB2Q03252 620 aa10.9□□□□□ -0.66
LIG3-203ENST00000585370 PDE4CQ08493 712 aa10.9□□□□□ -0.66
LIG3-203ENST00000585370 GPS2Q13227 327 aa10.9□□□□□ -0.66
LIG3-203ENST00000585370 MAPRE1Q15691 268 aaKnown RBP10.9□□□□□ -0.66
LIG3-203ENST00000585370 BOLA3Q53S33 107 aa10.9□□□□□ -0.66
LIG3-203ENST00000585370 NOMO2Q5JPE7 1267 aa10.9□□□□□ -0.66
LIG3-203ENST00000585370 EFHC1Q5JVL4 640 aa10.9□□□□□ -0.66
LIG3-203ENST00000585370 FAM102AQ5T9C2 384 aaPredicted RBP10.9□□□□□ -0.66
LIG3-203ENST00000585370 PMF1Q6P1K2 205 aa10.9□□□□□ -0.66
LIG3-203ENST00000585370 LLGL2Q6P1M3 1020 aa10.9□□□□□ -0.66
LIG3-203ENST00000585370 SYDE1Q6ZW31 735 aaPredicted RBP10.9□□□□□ -0.66
LIG3-203ENST00000585370 RTN4RL1Q86UN2 441 aaPredicted RBP10.9□□□□□ -0.66
LIG3-203ENST00000585370 TTC30AQ86WT1 665 aa10.9□□□□□ -0.66
LIG3-203ENST00000585370 THEM5Q8N1Q8 247 aa10.9□□□□□ -0.66
LIG3-203ENST00000585370 RNF169Q8NCN4 708 aa10.9□□□□□ -0.66
LIG3-203ENST00000585370 GRK7Q8WTQ7 553 aa10.9□□□□□ -0.66
LIG3-203ENST00000585370 KCTD13Q8WZ19 329 aa10.9□□□□□ -0.66
LIG3-203ENST00000585370 ACBD6Q9BR61 282 aa10.9□□□□□ -0.66
LIG3-203ENST00000585370 FRMD8P1Q9BZ68 369 aaPredicted RBP10.9□□□□□ -0.66
LIG3-203ENST00000585370 VIPAS39Q9H9C1 493 aa10.9□□□□□ -0.66
LIG3-203ENST00000585370 EPB41L5Q9HCM4 733 aa10.9□□□□□ -0.66
LIG3-203ENST00000585370 C11orf16Q9NQ32 467 aa10.9□□□□□ -0.66
LIG3-203ENST00000585370 METTL5Q9NRN9 209 aaKnown RBP10.9□□□□□ -0.66
LIG3-203ENST00000585370 FAM114A2Q9NRY5 505 aa10.9□□□□□ -0.66
LIG3-203ENST00000585370 FAM49BQ9NUQ9 324 aa10.9□□□□□ -0.66
LIG3-203ENST00000585370 RNF19AQ9NV58 838 aa10.9□□□□□ -0.66
LIG3-203ENST00000585370 DDX43Q9NXZ2 648 aaKnown RBP10.9□□□□□ -0.66
LIG3-203ENST00000585370 OGFRQ9NZT2 677 aa10.9□□□□□ -0.66
LIG3-203ENST00000585370 USTQ9Y2C2 406 aa10.9□□□□□ -0.66
LIG3-203ENST00000585370 NME7Q9Y5B8 376 aa10.9□□□□□ -0.66
LIG3-203ENST00000585370 TTC3P53804 2025 aa10.89□□□□□ -0.67
LIG3-203ENST00000585370 C2CD4BA6NLJ0 364 aa10.89□□□□□ -0.67
LIG3-203ENST00000585370 E5RJQ4 531 aa10.89□□□□□ -0.67
LIG3-203ENST00000585370 F8VP50 259 aa10.89□□□□□ -0.67
LIG3-203ENST00000585370 PI4K2BG5E9Z4 385 aa10.89□□□□□ -0.67
LIG3-203ENST00000585370 H3BQ06 376 aaPredicted RBP10.89□□□□□ -0.67
LIG3-203ENST00000585370 TMEM189-UBE2V1I3L0A0 370 aa10.89□□□□□ -0.67
LIG3-203ENST00000585370 MAP2K7O14733 419 aa10.89□□□□□ -0.67
LIG3-203ENST00000585370 TRAPPC3O43617 180 aa10.89□□□□□ -0.67
LIG3-203ENST00000585370 B3GAT3O94766 335 aa10.89□□□□□ -0.67
LIG3-203ENST00000585370 FBXO21O94952 628 aa10.89□□□□□ -0.67
LIG3-203ENST00000585370 TJP3O95049 919 aa10.89□□□□□ -0.67
LIG3-203ENST00000585370 POMCP01189 267 aa10.89□□□□□ -0.67
LIG3-203ENST00000585370 GLI1P08151 1106 aa10.89□□□□□ -0.67
LIG3-203ENST00000585370 IL9P15248 144 aa10.89□□□□□ -0.67
LIG3-203ENST00000585370 PDGFRAP16234 1089 aa10.89□□□□□ -0.67
LIG3-203ENST00000585370 COILP38432 576 aaPredicted RBP10.89□□□□□ -0.67
LIG3-203ENST00000585370 MARCKSL1P49006 195 aa10.89□□□□□ -0.67
LIG3-203ENST00000585370 TAS2R40P59535 323 aa10.89□□□□□ -0.67
LIG3-203ENST00000585370 SLC7A5Q01650 507 aa10.89□□□□□ -0.67
LIG3-203ENST00000585370 DR1Q01658 176 aa10.89□□□□□ -0.67
LIG3-203ENST00000585370 OGDHQ02218 1023 aa10.89□□□□□ -0.67
LIG3-203ENST00000585370 GUCY2DQ02846 1103 aa10.89□□□□□ -0.67
LIG3-203ENST00000585370 SMC1AQ14683 1233 aaKnown RBP10.89□□□□□ -0.67
LIG3-203ENST00000585370 COL19A1Q14993 1142 aa10.89□□□□□ -0.67
LIG3-203ENST00000585370 CCNG2Q16589 344 aa10.89□□□□□ -0.67
LIG3-203ENST00000585370 TCEAL5Q5H9L2 206 aa10.89□□□□□ -0.67
LIG3-203ENST00000585370 FAM183BPQ6ZVS7 135 aa10.89□□□□□ -0.67
LIG3-203ENST00000585370 SLC26A9Q7LBE3 791 aa10.89□□□□□ -0.67
LIG3-203ENST00000585370 OSTM1Q86WC4 334 aa10.89□□□□□ -0.67
LIG3-203ENST00000585370 CCDC50Q8IVM0 306 aa10.89□□□□□ -0.67
LIG3-203ENST00000585370 PRELID2Q8N945 189 aa10.89□□□□□ -0.67
LIG3-203ENST00000585370 SLC2A14Q8TDB8 520 aa10.89□□□□□ -0.67
LIG3-203ENST00000585370 HDAC7Q8WUI4 952 aa10.89□□□□□ -0.67
LIG3-203ENST00000585370 SEC14L1Q92503 715 aa10.89□□□□□ -0.67
LIG3-203ENST00000585370 SLCO2A1Q92959 643 aa10.89□□□□□ -0.67
LIG3-203ENST00000585370 CAVIN3Q969G5 261 aa10.89□□□□□ -0.67
LIG3-203ENST00000585370 PKNOX2Q96KN3 472 aa10.89□□□□□ -0.67
LIG3-203ENST00000585370 SUSD3Q96L08 255 aa10.89□□□□□ -0.67
LIG3-203ENST00000585370 FAM193BQ96PV7 902 aaPredicted RBP10.89□□□□□ -0.67
LIG3-203ENST00000585370 SYT15Q9BQS2 421 aa10.89□□□□□ -0.67
LIG3-203ENST00000585370 FUT8Q9BYC5 575 aa10.89□□□□□ -0.67
LIG3-203ENST00000585370 OSBPL8Q9BZF1 889 aa10.89□□□□□ -0.67
LIG3-203ENST00000585370 DDX47Q9H0S4 455 aaKnown RBP10.89□□□□□ -0.67
LIG3-203ENST00000585370 DPEP3Q9H4B8 488 aa10.89□□□□□ -0.67
LIG3-203ENST00000585370 RC3H2Q9HBD1 1191 aaKnown RBP10.89□□□□□ -0.67
LIG3-203ENST00000585370 ZNF446Q9NWS9 450 aa10.89□□□□□ -0.67
LIG3-203ENST00000585370 PCDHB7Q9Y5E2 793 aa10.89□□□□□ -0.67
LIG3-203ENST00000585370 GRXCR2A6NFK2 248 aa10.88□□□□□ -0.67
LIG3-203ENST00000585370 CASTOR2A6NHX0 329 aa10.88□□□□□ -0.67
LIG3-203ENST00000585370 C5orf67F2Z3F1 127 aa10.88□□□□□ -0.67
LIG3-203ENST00000585370 GPR37L1O60883 481 aa10.88□□□□□ -0.67
LIG3-203ENST00000585370 FAM200BP0CF97 657 aa10.88□□□□□ -0.67
LIG3-203ENST00000585370 RARAP10276 462 aa10.88□□□□□ -0.67
LIG3-203ENST00000585370 NPR3P17342 541 aa10.88□□□□□ -0.67
LIG3-203ENST00000585370 ADORA2BP29275 332 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms