RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 PCSK1P29120 753 aa11.91□□□□□ -0.5
CCDC47-206ENST00000584112 WEE1P30291 646 aa11.91□□□□□ -0.5
CCDC47-206ENST00000584112 CTHP32929 405 aa11.91□□□□□ -0.5
CCDC47-206ENST00000584112 LHX1P48742 406 aa11.91□□□□□ -0.5
CCDC47-206ENST00000584112 MLLT6P55198 1093 aaPredicted RBP11.91□□□□□ -0.5
CCDC47-206ENST00000584112 CXADRP78310 365 aa11.91□□□□□ -0.5
CCDC47-206ENST00000584112 DNM1Q05193 864 aaKnown RBP11.91□□□□□ -0.5
CCDC47-206ENST00000584112 EHHADHQ08426 723 aa11.91□□□□□ -0.5
CCDC47-206ENST00000584112 FCHO2Q0JRZ9 810 aa11.91□□□□□ -0.5
CCDC47-206ENST00000584112 GPR158Q5T848 1215 aa11.91□□□□□ -0.5
CCDC47-206ENST00000584112 LRRC69Q6ZNQ3 347 aa11.91□□□□□ -0.5
CCDC47-206ENST00000584112 ARMCX6Q7L4S7 300 aa11.91□□□□□ -0.5
CCDC47-206ENST00000584112 DPH6Q7L8W6 267 aa11.91□□□□□ -0.5
CCDC47-206ENST00000584112 LRRTM3Q86VH5 581 aa11.91□□□□□ -0.5
CCDC47-206ENST00000584112 CBWD2Q8IUF1 395 aa11.91□□□□□ -0.5
CCDC47-206ENST00000584112 WDR49Q8IV35 697 aa11.91□□□□□ -0.5
CCDC47-206ENST00000584112 ARID3BQ8IVW6 561 aaPredicted RBP11.91□□□□□ -0.5
CCDC47-206ENST00000584112 ADGRF2Q8IZF7 708 aa11.91□□□□□ -0.5
CCDC47-206ENST00000584112 CXorf38Q8TB03 319 aa11.91□□□□□ -0.5
CCDC47-206ENST00000584112 CSGALNACT1Q8TDX6 532 aa11.91□□□□□ -0.5
CCDC47-206ENST00000584112 MSANTD3Q96H12 275 aa11.91□□□□□ -0.5
CCDC47-206ENST00000584112 ABCB6Q9NP58 842 aa11.91□□□□□ -0.5
CCDC47-206ENST00000584112 DDX43Q9NXZ2 648 aaKnown RBP11.91□□□□□ -0.5
CCDC47-206ENST00000584112 SIX4Q9UIU6 781 aa11.91□□□□□ -0.5
CCDC47-206ENST00000584112 SSUH2Q9Y2M2 353 aa11.91□□□□□ -0.5
CCDC47-206ENST00000584112 PCDHB9Q9Y5E1 797 aa11.91□□□□□ -0.5
CCDC47-206ENST00000584112 KIAA1549LQ6ZVL6 1849 aa11.9□□□□□ -0.5
CCDC47-206ENST00000584112 MYBPHLA2RUH7 354 aa11.9□□□□□ -0.5
CCDC47-206ENST00000584112 OPHN1O60890 802 aa11.9□□□□□ -0.5
CCDC47-206ENST00000584112 CSH1P0DML2 217 aa11.9□□□□□ -0.5
CCDC47-206ENST00000584112 CSH2P0DML3 217 aa11.9□□□□□ -0.5
CCDC47-206ENST00000584112 DDX6P26196 483 aaKnown RBP eCLIP11.9□□□□□ -0.5
CCDC47-206ENST00000584112 HOXD13P35453 343 aa11.9□□□□□ -0.5
CCDC47-206ENST00000584112 RPL10AP62906 217 aaKnown RBP11.9□□□□□ -0.5
CCDC47-206ENST00000584112 PLCB2Q00722 1185 aa11.9□□□□□ -0.5
CCDC47-206ENST00000584112 PKP1Q13835 747 aa11.9□□□□□ -0.5
CCDC47-206ENST00000584112 SNRNP35Q16560 246 aaKnown RBP11.9□□□□□ -0.5
CCDC47-206ENST00000584112 BMT2Q1RMZ1 405 aa11.9□□□□□ -0.5
CCDC47-206ENST00000584112 ARHGAP29Q52LW3 1261 aa11.9□□□□□ -0.5
CCDC47-206ENST00000584112 INTS6LQ5JSJ4 861 aaKnown RBP11.9□□□□□ -0.5
CCDC47-206ENST00000584112 STXBP5Q5T5C0 1151 aa11.9□□□□□ -0.5
CCDC47-206ENST00000584112 LMBRD2Q68DH5 695 aaPredicted RBP11.9□□□□□ -0.5
CCDC47-206ENST00000584112 XXYLT1Q8NBI6 393 aa11.9□□□□□ -0.5
CCDC47-206ENST00000584112 SPRYD3Q8NCJ5 442 aa11.9□□□□□ -0.5
CCDC47-206ENST00000584112 GIPC2Q8TF65 315 aa11.9□□□□□ -0.5
CCDC47-206ENST00000584112 HPDLQ96IR7 371 aa11.9□□□□□ -0.5
CCDC47-206ENST00000584112 FNBP1Q96RU3 617 aa11.9□□□□□ -0.5
CCDC47-206ENST00000584112 PI4K2AQ9BTU6 479 aa11.9□□□□□ -0.5
CCDC47-206ENST00000584112 BLZF1Q9H2G9 400 aa11.9□□□□□ -0.5
CCDC47-206ENST00000584112 TASP1Q9H6P5 420 aa11.9□□□□□ -0.5
CCDC47-206ENST00000584112 C8orf33Q9H7E9 229 aaPredicted RBP11.9□□□□□ -0.5
CCDC47-206ENST00000584112 AGPAT3Q9NRZ7 376 aa11.9□□□□□ -0.5
CCDC47-206ENST00000584112 UXTQ9UBK9 157 aaPredicted RBP11.9□□□□□ -0.5
CCDC47-206ENST00000584112 RCOR1Q9UKL0 485 aa11.9□□□□□ -0.5
CCDC47-206ENST00000584112 APOBEC2Q9Y235 224 aaKnown RBP11.9□□□□□ -0.5
CCDC47-206ENST00000584112 ICE1Q9Y2F5 2266 aa11.9□□□□□ -0.5
CCDC47-206ENST00000584112 PCDH15Q96QU1 1955 aa11.9□□□□□ -0.5
CCDC47-206ENST00000584112 MYOFQ9NZM1 2061 aa11.9□□□□□ -0.51
CCDC47-206ENST00000584112 PTPRJQ12913 1337 aa11.89□□□□□ -0.51
CCDC47-206ENST00000584112 GABRDO14764 452 aa11.89□□□□□ -0.51
CCDC47-206ENST00000584112 TGFB1I1O43294 461 aa11.89□□□□□ -0.51
CCDC47-206ENST00000584112 CFIP05156 583 aa11.89□□□□□ -0.51
CCDC47-206ENST00000584112 SLFN14P0C7P3 912 aa11.89□□□□□ -0.51
CCDC47-206ENST00000584112 DLATP10515 647 aaKnown RBP11.89□□□□□ -0.51
CCDC47-206ENST00000584112 MYF5P13349 255 aa11.89□□□□□ -0.51
CCDC47-206ENST00000584112 TNNI1P19237 187 aa11.89□□□□□ -0.51
CCDC47-206ENST00000584112 AFMP43652 599 aa11.89□□□□□ -0.51
CCDC47-206ENST00000584112 CYP2J2P51589 502 aa11.89□□□□□ -0.51
CCDC47-206ENST00000584112 ATXN3P54252 364 aaPredicted RBP11.89□□□□□ -0.51
CCDC47-206ENST00000584112 CYP4F8P98187 520 aa11.89□□□□□ -0.51
CCDC47-206ENST00000584112 HNRNPDQ14103 355 aaKnown RBP11.89□□□□□ -0.51
CCDC47-206ENST00000584112 PSMD6Q15008 389 aa11.89□□□□□ -0.51
CCDC47-206ENST00000584112 SOWAHAQ2M3V2 549 aa11.89□□□□□ -0.51
CCDC47-206ENST00000584112 C4orf50Q6ZRC1 276 aa11.89□□□□□ -0.51
CCDC47-206ENST00000584112 SPATA2LQ8IUW3 424 aaPredicted RBP11.89□□□□□ -0.51
CCDC47-206ENST00000584112 NELFCDQ8IXH7 590 aa11.89□□□□□ -0.51
CCDC47-206ENST00000584112 MINDY1Q8N5J2 469 aa11.89□□□□□ -0.51
CCDC47-206ENST00000584112 CAMKK1Q8N5S9 505 aa11.89□□□□□ -0.51
CCDC47-206ENST00000584112 OR5B17Q8NGF7 314 aa11.89□□□□□ -0.51
CCDC47-206ENST00000584112 GOLGA5Q8TBA6 731 aa11.89□□□□□ -0.51
CCDC47-206ENST00000584112 SCFD1Q8WVM8 642 aa11.89□□□□□ -0.51
CCDC47-206ENST00000584112 RSPRY1Q96DX4 576 aa11.89□□□□□ -0.51
CCDC47-206ENST00000584112 FUBP3Q96I24 572 aaKnown RBP eCLIP11.89□□□□□ -0.51
CCDC47-206ENST00000584112 CGRRF1Q99675 332 aa11.89□□□□□ -0.51
CCDC47-206ENST00000584112 TPSD1Q9BZJ3 242 aa11.89□□□□□ -0.51
CCDC47-206ENST00000584112 IL21Q9HBE4 155 aa11.89□□□□□ -0.51
CCDC47-206ENST00000584112 TMLHEQ9NVH6 421 aa11.89□□□□□ -0.51
CCDC47-206ENST00000584112 THG1LQ9NWX6 298 aaKnown RBP11.89□□□□□ -0.51
CCDC47-206ENST00000584112 USP25Q9UHP3 1055 aa11.89□□□□□ -0.51
CCDC47-206ENST00000584112 NF1P21359 2839 aa11.88□□□□□ -0.51
CCDC47-206ENST00000584112 CLIC2O15247 247 aa11.88□□□□□ -0.51
CCDC47-206ENST00000584112 F11P03951 625 aa11.88□□□□□ -0.51
CCDC47-206ENST00000584112 MYL1P05976 194 aa11.88□□□□□ -0.51
CCDC47-206ENST00000584112 ACAT1P24752 427 aaKnown RBP11.88□□□□□ -0.51
CCDC47-206ENST00000584112 CASP1P29466 404 aa11.88□□□□□ -0.51
CCDC47-206ENST00000584112 AVPR1AP37288 418 aa11.88□□□□□ -0.51
CCDC47-206ENST00000584112 CDR1P51861 262 aa11.88□□□□□ -0.51
CCDC47-206ENST00000584112 DGKEP52429 567 aa11.88□□□□□ -0.51
CCDC47-206ENST00000584112 NLRP12P59046 1061 aa11.88□□□□□ -0.51
CCDC47-206ENST00000584112 KRT85P78386 507 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms