RNA–Protein interactions for RNA: ENST00000583972.1

SUPT6H-209, Transcript of SPT6 homolog, histone chaperone, humanhuman

TSL 2

Gene SUPT6H, Length 1,969 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT6H-209ENST00000583972 SF3A3Q12874 501 aaKnown RBP eCLIP12.87□□□□□ -0.35
SUPT6H-209ENST00000583972 MFSD10Q14728 455 aa12.87□□□□□ -0.35
SUPT6H-209ENST00000583972 TMED2Q15363 201 aa12.87□□□□□ -0.35
SUPT6H-209ENST00000583972 RAB30Q15771 203 aa12.87□□□□□ -0.35
SUPT6H-209ENST00000583972 WDR72Q3MJ13 1102 aa12.87□□□□□ -0.35
SUPT6H-209ENST00000583972 CELF3Q5SZQ8 465 aaKnown RBP12.87□□□□□ -0.35
SUPT6H-209ENST00000583972 RNASEH2BQ5TBB1 312 aaKnown RBP12.87□□□□□ -0.35
SUPT6H-209ENST00000583972 MPZL3Q6UWV2 235 aa12.87□□□□□ -0.35
SUPT6H-209ENST00000583972 SLC35B2Q8TB61 432 aa12.87□□□□□ -0.35
SUPT6H-209ENST00000583972 MAGEC3Q8TD91 643 aa12.87□□□□□ -0.35
SUPT6H-209ENST00000583972 FNIP1Q8TF40 1166 aa12.87□□□□□ -0.35
SUPT6H-209ENST00000583972 ANKRD36BP1Q96IX9 119 aa12.87□□□□□ -0.35
SUPT6H-209ENST00000583972 SPATA33Q96N06 139 aa12.87□□□□□ -0.35
SUPT6H-209ENST00000583972 FRMD8P1Q9BZ68 369 aaPredicted RBP12.87□□□□□ -0.35
SUPT6H-209ENST00000583972 XYLT2Q9H1B5 865 aa12.87□□□□□ -0.35
SUPT6H-209ENST00000583972 LHX5Q9H2C1 402 aa12.87□□□□□ -0.35
SUPT6H-209ENST00000583972 PCDH9Q9HC56 1237 aa12.87□□□□□ -0.35
SUPT6H-209ENST00000583972 PTPRHQ9HD43 1115 aa12.87□□□□□ -0.35
SUPT6H-209ENST00000583972 ABCF3Q9NUQ8 709 aa12.87□□□□□ -0.35
SUPT6H-209ENST00000583972 ARL2BPQ9Y2Y0 163 aa12.87□□□□□ -0.35
SUPT6H-209ENST00000583972 SLC4A7Q9Y6M7 1214 aa12.87□□□□□ -0.35
SUPT6H-209ENST00000583972 MYO9BQ13459 2157 aa12.87□□□□□ -0.35
SUPT6H-209ENST00000583972 C3orf70A6NLC5 250 aaPredicted RBP12.87□□□□□ -0.35
SUPT6H-209ENST00000583972 SIGLEC16A6NMB1 481 aa12.87□□□□□ -0.35
SUPT6H-209ENST00000583972 ZBTB42B2RXF5 422 aa12.87□□□□□ -0.35
SUPT6H-209ENST00000583972 HAS3O00219 553 aa12.87□□□□□ -0.35
SUPT6H-209ENST00000583972 ACKR2O00590 384 aa12.87□□□□□ -0.35
SUPT6H-209ENST00000583972 ALOX15BO15296 676 aa12.87□□□□□ -0.35
SUPT6H-209ENST00000583972 MED7O43513 233 aa12.87□□□□□ -0.35
SUPT6H-209ENST00000583972 LGR5O75473 907 aa12.87□□□□□ -0.35
SUPT6H-209ENST00000583972 ETS1P14921 441 aa12.87□□□□□ -0.35
SUPT6H-209ENST00000583972 RFC2P35250 354 aa12.87□□□□□ -0.35
SUPT6H-209ENST00000583972 SLC18A1P54219 525 aa12.87□□□□□ -0.35
SUPT6H-209ENST00000583972 GSCP56915 257 aaPredicted RBP12.87□□□□□ -0.35
SUPT6H-209ENST00000583972 IL9RQ01113 521 aa12.87□□□□□ -0.35
SUPT6H-209ENST00000583972 BFSP2Q13515 415 aa12.87□□□□□ -0.35
SUPT6H-209ENST00000583972 GALNTL6Q49A17 601 aa12.87□□□□□ -0.35
SUPT6H-209ENST00000583972 CYP4A22Q5TCH4 519 aa12.87□□□□□ -0.35
SUPT6H-209ENST00000583972 PLPPR4Q7Z2D5 763 aa12.87□□□□□ -0.35
SUPT6H-209ENST00000583972 SPATA21Q7Z572 469 aa12.87□□□□□ -0.35
SUPT6H-209ENST00000583972 PCGF5Q86SE9 256 aa12.87□□□□□ -0.35
SUPT6H-209ENST00000583972 TRABD2AQ86V40 505 aa12.87□□□□□ -0.35
SUPT6H-209ENST00000583972 CCDC63Q8NA47 563 aa12.87□□□□□ -0.35
SUPT6H-209ENST00000583972 GRAMD1AQ96CP6 724 aa12.87□□□□□ -0.35
SUPT6H-209ENST00000583972 GPR20Q99678 358 aa12.87□□□□□ -0.35
SUPT6H-209ENST00000583972 KATNAL1Q9BW62 490 aa12.87□□□□□ -0.35
SUPT6H-209ENST00000583972 PHACTR1Q9C0D0 580 aa12.87□□□□□ -0.35
SUPT6H-209ENST00000583972 PRKAG3Q9UGI9 489 aa12.87□□□□□ -0.35
SUPT6H-209ENST00000583972 MSRAQ9UJ68 235 aa12.87□□□□□ -0.35
SUPT6H-209ENST00000583972 KRT7P08729 469 aa12.86□□□□□ -0.35
SUPT6H-209ENST00000583972 KRT3P12035 628 aa12.86□□□□□ -0.35
SUPT6H-209ENST00000583972 MYOGP15173 224 aa12.86□□□□□ -0.35
SUPT6H-209ENST00000583972 ATP2A2P16615 1042 aaKnown RBP12.86□□□□□ -0.35
SUPT6H-209ENST00000583972 PSMA2P25787 234 aa12.86□□□□□ -0.35
SUPT6H-209ENST00000583972 ELF3P78545 371 aaPredicted RBP12.86□□□□□ -0.35
SUPT6H-209ENST00000583972 HIC1Q14526 733 aa12.86□□□□□ -0.35
SUPT6H-209ENST00000583972 PTPN20Q4JDL3 420 aa12.86□□□□□ -0.35
SUPT6H-209ENST00000583972 FAM133BQ5BKY9 247 aaKnown RBP12.86□□□□□ -0.35
SUPT6H-209ENST00000583972 ATF7IP2Q5U623 682 aa12.86□□□□□ -0.35
SUPT6H-209ENST00000583972 SCARA5Q6ZMJ2 495 aa12.86□□□□□ -0.35
SUPT6H-209ENST00000583972 CENPUQ71F23 418 aa12.86□□□□□ -0.35
SUPT6H-209ENST00000583972 C7orf31Q8N865 590 aa12.86□□□□□ -0.35
SUPT6H-209ENST00000583972 TTC13Q8NBP0 860 aa12.86□□□□□ -0.35
SUPT6H-209ENST00000583972 WNT8BQ93098 351 aa12.86□□□□□ -0.35
SUPT6H-209ENST00000583972 FAXDC2Q96IV6 333 aa12.86□□□□□ -0.35
SUPT6H-209ENST00000583972 TMEM121Q9BTD3 319 aa12.86□□□□□ -0.35
SUPT6H-209ENST00000583972 FZD8Q9H461 694 aa12.86□□□□□ -0.35
SUPT6H-209ENST00000583972 PRDM12Q9H4Q4 367 aa12.86□□□□□ -0.35
SUPT6H-209ENST00000583972 SENP1Q9P0U3 644 aa12.86□□□□□ -0.35
SUPT6H-209ENST00000583972 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.86□□□□□ -0.35
SUPT6H-209ENST00000583972 REV3LO60673 3130 aa12.86□□□□□ -0.35
SUPT6H-209ENST00000583972 SGK1O00141 431 aa12.85□□□□□ -0.35
SUPT6H-209ENST00000583972 PRPF4O43172 522 aaKnown RBP eCLIP12.85□□□□□ -0.35
SUPT6H-209ENST00000583972 UBOX5O94941 541 aa12.85□□□□□ -0.35
SUPT6H-209ENST00000583972 RFC1P35251 1148 aaPredicted RBP12.85□□□□□ -0.35
SUPT6H-209ENST00000583972 PLCB3Q01970 1234 aa12.85□□□□□ -0.35
SUPT6H-209ENST00000583972 SLC25A11Q02978 314 aaKnown RBP12.85□□□□□ -0.35
SUPT6H-209ENST00000583972 TFDP1Q14186 410 aa12.85□□□□□ -0.35
SUPT6H-209ENST00000583972 GPNMBQ14956 572 aa12.85□□□□□ -0.35
SUPT6H-209ENST00000583972 RASA2Q15283 850 aa12.85□□□□□ -0.35
SUPT6H-209ENST00000583972 HADHQ16836 314 aaKnown RBP12.85□□□□□ -0.35
SUPT6H-209ENST00000583972 DENND1BQ6P3S1 775 aa12.85□□□□□ -0.35
SUPT6H-209ENST00000583972 RHPN2Q8IUC4 686 aa12.85□□□□□ -0.35
SUPT6H-209ENST00000583972 THNSL1Q8IYQ7 743 aa12.85□□□□□ -0.35
SUPT6H-209ENST00000583972 ZBED8Q8IZ13 594 aa12.85□□□□□ -0.35
SUPT6H-209ENST00000583972 LRRC71Q8N4P6 559 aa12.85□□□□□ -0.35
SUPT6H-209ENST00000583972 PRCCQ92733 491 aaPredicted RBP12.85□□□□□ -0.35
SUPT6H-209ENST00000583972 ACSF2Q96CM8 615 aaPredicted RBP12.85□□□□□ -0.35
SUPT6H-209ENST00000583972 CD248Q9HCU0 757 aa12.85□□□□□ -0.35
SUPT6H-209ENST00000583972 WDR35Q9P2L0 1181 aa12.85□□□□□ -0.35
SUPT6H-209ENST00000583972 NOP56O00567 594 aaKnown RBP12.85□□□□□ -0.35
SUPT6H-209ENST00000583972 MAGEB2O15479 319 aa12.85□□□□□ -0.35
SUPT6H-209ENST00000583972 LRCH4O75427 683 aa12.85□□□□□ -0.35
SUPT6H-209ENST00000583972 IL18RAPO95256 599 aa12.85□□□□□ -0.35
SUPT6H-209ENST00000583972 ASMTLO95671 621 aa12.85□□□□□ -0.35
SUPT6H-209ENST00000583972 TAC1P20366 129 aa12.85□□□□□ -0.35
SUPT6H-209ENST00000583972 MARK3P27448 753 aa12.85□□□□□ -0.35
SUPT6H-209ENST00000583972 ZNF200P98182 395 aaPredicted RBP12.85□□□□□ -0.35
SUPT6H-209ENST00000583972 BNIP1Q12981 228 aa12.85□□□□□ -0.35
SUPT6H-209ENST00000583972 FASTKD3Q14CZ7 662 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms