RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 ERICH1Q86X53 443 aa11.53□□□□□ -0.56
TOP3A-216ENST00000583804 SIX6OS1Q8N1H7 587 aa11.53□□□□□ -0.56
TOP3A-216ENST00000583804 SMG7Q92540 1137 aaKnown RBP11.53□□□□□ -0.56
TOP3A-216ENST00000583804 PSMG2Q969U7 264 aa11.53□□□□□ -0.56
TOP3A-216ENST00000583804 HSFY1Q96LI6 401 aa11.53□□□□□ -0.56
TOP3A-216ENST00000583804 CORO1BQ9BR76 489 aa11.53□□□□□ -0.56
TOP3A-216ENST00000583804 C11orf70Q9BRQ4 267 aa11.53□□□□□ -0.56
TOP3A-216ENST00000583804 LACRTQ9GZZ8 138 aa11.53□□□□□ -0.56
TOP3A-216ENST00000583804 MIS12Q9H081 205 aa11.53□□□□□ -0.56
TOP3A-216ENST00000583804 PNPLA8Q9NP80 782 aa11.53□□□□□ -0.56
TOP3A-216ENST00000583804 EHD2Q9NZN4 543 aa11.53□□□□□ -0.56
TOP3A-216ENST00000583804 CLEC1BQ9P126 229 aa11.53□□□□□ -0.56
TOP3A-216ENST00000583804 TJP2Q9UDY2 1190 aa11.53□□□□□ -0.56
TOP3A-216ENST00000583804 ASB3Q9Y575 518 aa11.53□□□□□ -0.56
TOP3A-216ENST00000583804 PAXBP1Q9Y5B6 917 aa11.53□□□□□ -0.56
TOP3A-216ENST00000583804 DUSP10Q9Y6W6 482 aa11.53□□□□□ -0.56
TOP3A-216ENST00000583804 MACROD2A1Z1Q3 448 aa11.52□□□□□ -0.56
TOP3A-216ENST00000583804 TNFRSF10BO14763 440 aa11.52□□□□□ -0.56
TOP3A-216ENST00000583804 TBX10O75333 385 aa11.52□□□□□ -0.56
TOP3A-216ENST00000583804 RTN3O95197 1032 aaPredicted RBP11.52□□□□□ -0.56
TOP3A-216ENST00000583804 GJB6O95452 261 aa11.52□□□□□ -0.56
TOP3A-216ENST00000583804 FTLP02792 175 aaPredicted RBP11.52□□□□□ -0.56
TOP3A-216ENST00000583804 CYP1A1P04798 512 aaPredicted RBP11.52□□□□□ -0.56
TOP3A-216ENST00000583804 USP17L7P0C7H9 530 aa11.52□□□□□ -0.56
TOP3A-216ENST00000583804 UNGP13051 313 aaPredicted RBP11.52□□□□□ -0.56
TOP3A-216ENST00000583804 PTPN2P17706 415 aa11.52□□□□□ -0.56
TOP3A-216ENST00000583804 CDH5P33151 784 aaPredicted RBP11.52□□□□□ -0.56
TOP3A-216ENST00000583804 LTBRP36941 435 aa11.52□□□□□ -0.56
TOP3A-216ENST00000583804 ACADSBP45954 432 aa11.52□□□□□ -0.56
TOP3A-216ENST00000583804 SNX16P57768 344 aa11.52□□□□□ -0.56
TOP3A-216ENST00000583804 USP46P62068 366 aa11.52□□□□□ -0.56
TOP3A-216ENST00000583804 KRT83P78385 493 aa11.52□□□□□ -0.56
TOP3A-216ENST00000583804 ADIGQ0VDE8 80 aa11.52□□□□□ -0.56
TOP3A-216ENST00000583804 CYP4A22Q5TCH4 519 aa11.52□□□□□ -0.56
TOP3A-216ENST00000583804 ACAD10Q6JQN1 1059 aa11.52□□□□□ -0.56
TOP3A-216ENST00000583804 SYCE2Q6PIF2 218 aa11.52□□□□□ -0.56
TOP3A-216ENST00000583804 MMS22LQ6ZRQ5 1243 aa11.52□□□□□ -0.56
TOP3A-216ENST00000583804 GRASPQ7Z6J2 395 aaPredicted RBP11.52□□□□□ -0.56
TOP3A-216ENST00000583804 MTERF4Q7Z6M4 381 aaKnown RBP11.52□□□□□ -0.56
TOP3A-216ENST00000583804 REXO1L1PQ8IX06 675 aa11.52□□□□□ -0.56
TOP3A-216ENST00000583804 HS6ST3Q8IZP7 471 aa11.52□□□□□ -0.56
TOP3A-216ENST00000583804 MSANTD4Q8NCY6 345 aa11.52□□□□□ -0.56
TOP3A-216ENST00000583804 STK32AQ8WU08 396 aa11.52□□□□□ -0.56
TOP3A-216ENST00000583804 KCTD13Q8WZ19 329 aa11.52□□□□□ -0.56
TOP3A-216ENST00000583804 FBXO32Q969P5 355 aa11.52□□□□□ -0.56
TOP3A-216ENST00000583804 ZNF653Q96CK0 615 aa11.52□□□□□ -0.56
TOP3A-216ENST00000583804 ARHGEF26Q96DR7 871 aa11.52□□□□□ -0.56
TOP3A-216ENST00000583804 CEP295NLQ96MC4 621 aa11.52□□□□□ -0.56
TOP3A-216ENST00000583804 C16orf45Q96MC5 204 aaPredicted RBP11.52□□□□□ -0.56
TOP3A-216ENST00000583804 CPXM1Q96SM3 734 aa11.52□□□□□ -0.56
TOP3A-216ENST00000583804 SLC4A5Q9BY07 1137 aa11.52□□□□□ -0.56
TOP3A-216ENST00000583804 ASAH2Q9NR71 780 aa11.52□□□□□ -0.56
TOP3A-216ENST00000583804 KCND1Q9NSA2 647 aa11.52□□□□□ -0.56
TOP3A-216ENST00000583804 HCFC1R1Q9NWW0 138 aa11.52□□□□□ -0.56
TOP3A-216ENST00000583804 GUCA1BQ9UMX6 200 aa11.52□□□□□ -0.56
TOP3A-216ENST00000583804 E5RJQ4 531 aa11.51□□□□□ -0.57
TOP3A-216ENST00000583804 H3BQ06 376 aaPredicted RBP11.51□□□□□ -0.57
TOP3A-216ENST00000583804 ZSCAN12O43309 604 aa11.51□□□□□ -0.57
TOP3A-216ENST00000583804 BUB1O43683 1085 aa11.51□□□□□ -0.57
TOP3A-216ENST00000583804 MYL4P12829 197 aa11.51□□□□□ -0.57
TOP3A-216ENST00000583804 HMGA1P17096 107 aaKnown RBP11.51□□□□□ -0.57
TOP3A-216ENST00000583804 KCNA5P22460 613 aa11.51□□□□□ -0.57
TOP3A-216ENST00000583804 ARHGAP25P42331 645 aa11.51□□□□□ -0.57
TOP3A-216ENST00000583804 VAV2P52735 878 aa11.51□□□□□ -0.57
TOP3A-216ENST00000583804 GALCP54803 685 aa11.51□□□□□ -0.57
TOP3A-216ENST00000583804 NAP1L1P55209 391 aaKnown RBP11.51□□□□□ -0.57
TOP3A-216ENST00000583804 NTHL1P78549 312 aa11.51□□□□□ -0.57
TOP3A-216ENST00000583804 TAF10Q12962 218 aa11.51□□□□□ -0.57
TOP3A-216ENST00000583804 PTPN20Q4JDL3 420 aa11.51□□□□□ -0.57
TOP3A-216ENST00000583804 ARHGAP29Q52LW3 1261 aa11.51□□□□□ -0.57
TOP3A-216ENST00000583804 CES5AQ6NT32 575 aa11.51□□□□□ -0.57
TOP3A-216ENST00000583804 TMEM110Q86TL2 294 aa11.51□□□□□ -0.57
TOP3A-216ENST00000583804 SCUBE3Q8IX30 993 aa11.51□□□□□ -0.57
TOP3A-216ENST00000583804 CMASQ8NFW8 434 aaPredicted RBP11.51□□□□□ -0.57
TOP3A-216ENST00000583804 FEZF2Q8TBJ5 459 aa11.51□□□□□ -0.57
TOP3A-216ENST00000583804 IPO4Q8TEX9 1081 aaKnown RBP11.51□□□□□ -0.57
TOP3A-216ENST00000583804 NDRG1Q92597 394 aaKnown RBP11.51□□□□□ -0.57
TOP3A-216ENST00000583804 ZNF707Q96C28 371 aaPredicted RBP11.51□□□□□ -0.57
TOP3A-216ENST00000583804 C18orf8Q96DM3 657 aa11.51□□□□□ -0.57
TOP3A-216ENST00000583804 IRX2Q9BZI1 471 aaPredicted RBP11.51□□□□□ -0.57
TOP3A-216ENST00000583804 ULBP1Q9BZM6 244 aa11.51□□□□□ -0.57
TOP3A-216ENST00000583804 THAP2Q9H0W7 228 aa11.51□□□□□ -0.57
TOP3A-216ENST00000583804 ADAM7Q9H2U9 754 aa11.51□□□□□ -0.57
TOP3A-216ENST00000583804 FBXO44Q9H4M3 255 aa11.51□□□□□ -0.57
TOP3A-216ENST00000583804 COMMD8Q9NX08 183 aa11.51□□□□□ -0.57
TOP3A-216ENST00000583804 ADAM22Q9P0K1 906 aa11.51□□□□□ -0.57
TOP3A-216ENST00000583804 DNMT3BQ9UBC3 853 aaKnown RBP11.51□□□□□ -0.57
TOP3A-216ENST00000583804 NENFQ9UMX5 172 aa11.51□□□□□ -0.57
TOP3A-216ENST00000583804 MYH10P35580 1976 aa11.51□□□□□ -0.57
TOP3A-216ENST00000583804 TMEM110-MUSTN1A8MSY1 372 aa11.51□□□□□ -0.57
TOP3A-216ENST00000583804 GOLGA8SH3BPF8 625 aa11.51□□□□□ -0.57
TOP3A-216ENST00000583804 RTN2O75298 545 aa11.51□□□□□ -0.57
TOP3A-216ENST00000583804 GABBR2O75899 941 aa11.51□□□□□ -0.57
TOP3A-216ENST00000583804 MOCS3O95396 460 aa11.51□□□□□ -0.57
TOP3A-216ENST00000583804 LCA5LO95447 670 aa11.51□□□□□ -0.57
TOP3A-216ENST00000583804 ZBED1O96006 694 aa11.51□□□□□ -0.57
TOP3A-216ENST00000583804 ERBB2P04626 1255 aa11.51□□□□□ -0.57
TOP3A-216ENST00000583804 H2AFZP0C0S5 128 aa11.51□□□□□ -0.57
TOP3A-216ENST00000583804 GZMAP12544 262 aa11.51□□□□□ -0.57
TOP3A-216ENST00000583804 MMP8P22894 467 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms