RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 FSHRP23945 695 aa9.8□□□□□ -0.84
UBBP4-201ENST00000583708 TKTL1P51854 596 aa9.8□□□□□ -0.84
UBBP4-201ENST00000583708 KPNA1P52294 538 aaPredicted RBP9.8□□□□□ -0.84
UBBP4-201ENST00000583708 GSCP56915 257 aaPredicted RBP9.8□□□□□ -0.84
UBBP4-201ENST00000583708 NOMO3P69849 1222 aa9.8□□□□□ -0.84
UBBP4-201ENST00000583708 MRPS5P82675 430 aaKnown RBP9.8□□□□□ -0.84
UBBP4-201ENST00000583708 ARID5AQ03989 594 aa9.8□□□□□ -0.84
UBBP4-201ENST00000583708 PDCLQ13371 301 aa9.8□□□□□ -0.84
UBBP4-201ENST00000583708 CBX2Q14781 532 aaPredicted RBP9.8□□□□□ -0.84
UBBP4-201ENST00000583708 SMAD2Q15796 467 aaKnown RBP9.8□□□□□ -0.84
UBBP4-201ENST00000583708 TDRD12Q587J7 1177 aaKnown RBP9.8□□□□□ -0.84
UBBP4-201ENST00000583708 HGSNATQ68CP4 663 aa9.8□□□□□ -0.84
UBBP4-201ENST00000583708 ACAD10Q6JQN1 1059 aa9.8□□□□□ -0.84
UBBP4-201ENST00000583708 PMF1Q6P1K2 205 aa9.8□□□□□ -0.84
UBBP4-201ENST00000583708 DENND1BQ6P3S1 775 aa9.8□□□□□ -0.84
UBBP4-201ENST00000583708 EP400NLQ6ZTU2 488 aa9.8□□□□□ -0.84
UBBP4-201ENST00000583708 TMC8Q8IU68 726 aa9.8□□□□□ -0.84
UBBP4-201ENST00000583708 WDTC1Q8N5D0 677 aa9.8□□□□□ -0.84
UBBP4-201ENST00000583708 TTC9BQ8N6N2 239 aa9.8□□□□□ -0.84
UBBP4-201ENST00000583708 TC2NQ8N9U0 490 aa9.8□□□□□ -0.84
UBBP4-201ENST00000583708 CCDC112Q8NEF3 446 aa9.8□□□□□ -0.84
UBBP4-201ENST00000583708 SLC30A5Q8TAD4 765 aa9.8□□□□□ -0.84
UBBP4-201ENST00000583708 GIPC2Q8TF65 315 aa9.8□□□□□ -0.84
UBBP4-201ENST00000583708 UBE2Q2Q8WVN8 375 aa9.8□□□□□ -0.84
UBBP4-201ENST00000583708 FBXO32Q969P5 355 aa9.8□□□□□ -0.84
UBBP4-201ENST00000583708 CALR3Q96L12 384 aaKnown RBP9.8□□□□□ -0.84
UBBP4-201ENST00000583708 CCDC42Q96M95 316 aa9.8□□□□□ -0.84
UBBP4-201ENST00000583708 NCAPGQ9BPX3 1015 aa9.8□□□□□ -0.84
UBBP4-201ENST00000583708 LPIN3Q9BQK8 851 aa9.8□□□□□ -0.84
UBBP4-201ENST00000583708 CORO1BQ9BR76 489 aa9.8□□□□□ -0.84
UBBP4-201ENST00000583708 ISCUQ9H1K1 167 aa9.8□□□□□ -0.84
UBBP4-201ENST00000583708 TASP1Q9H6P5 420 aa9.8□□□□□ -0.84
UBBP4-201ENST00000583708 SYNCQ9H7C4 482 aa9.8□□□□□ -0.84
UBBP4-201ENST00000583708 ABCC13Q9NSE7 274 aa9.8□□□□□ -0.84
UBBP4-201ENST00000583708 DNMT3BQ9UBC3 853 aaKnown RBP9.8□□□□□ -0.84
UBBP4-201ENST00000583708 INTUQ9ULD6 942 aa9.8□□□□□ -0.84
UBBP4-201ENST00000583708 ZNF840PA6NDX5 716 aa9.79□□□□□ -0.84
UBBP4-201ENST00000583708 BEST1O76090 585 aa9.79□□□□□ -0.84
UBBP4-201ENST00000583708 IPO7O95373 1038 aaKnown RBP9.79□□□□□ -0.84
UBBP4-201ENST00000583708 PNMA6AP0CW24 399 aaPredicted RBP9.79□□□□□ -0.84
UBBP4-201ENST00000583708 TCF3P15923 654 aa9.79□□□□□ -0.84
UBBP4-201ENST00000583708 GABRR2P28476 465 aa9.79□□□□□ -0.84
UBBP4-201ENST00000583708 CYLC1P35663 651 aaPredicted RBP9.79□□□□□ -0.84
UBBP4-201ENST00000583708 CACNA2D1P54289 1103 aa9.79□□□□□ -0.84
UBBP4-201ENST00000583708 DLX2Q07687 328 aaPredicted RBP9.79□□□□□ -0.84
UBBP4-201ENST00000583708 TAF10Q12962 218 aa9.79□□□□□ -0.84
UBBP4-201ENST00000583708 SLC18A3Q16572 532 aa9.79□□□□□ -0.84
UBBP4-201ENST00000583708 PRSS36Q5K4E3 855 aa9.79□□□□□ -0.84
UBBP4-201ENST00000583708 HECTD3Q5T447 861 aa9.79□□□□□ -0.84
UBBP4-201ENST00000583708 ACBD5Q5T8D3 534 aaPredicted RBP9.79□□□□□ -0.84
UBBP4-201ENST00000583708 WDR59Q6PJI9 974 aa9.79□□□□□ -0.84
UBBP4-201ENST00000583708 ZNF571Q7Z3V5 609 aaPredicted RBP9.79□□□□□ -0.84
UBBP4-201ENST00000583708 GRASPQ7Z6J2 395 aaPredicted RBP9.79□□□□□ -0.84
UBBP4-201ENST00000583708 DDX42Q86XP3 938 aaKnown RBP eCLIP9.79□□□□□ -0.84
UBBP4-201ENST00000583708 C12orf76Q8N812 135 aaPredicted RBP9.79□□□□□ -0.84
UBBP4-201ENST00000583708 PHF7Q9BWX1 381 aaPredicted RBP9.79□□□□□ -0.84
UBBP4-201ENST00000583708 DEF6Q9H4E7 631 aa9.79□□□□□ -0.84
UBBP4-201ENST00000583708 KIF9Q9HAQ2 790 aa9.79□□□□□ -0.84
UBBP4-201ENST00000583708 TRPV4Q9HBA0 871 aa9.79□□□□□ -0.84
UBBP4-201ENST00000583708 IL21Q9HBE4 155 aa9.79□□□□□ -0.84
UBBP4-201ENST00000583708 ACP6Q9NPH0 428 aa9.79□□□□□ -0.84
UBBP4-201ENST00000583708 ST7Q9NRC1 585 aa9.79□□□□□ -0.84
UBBP4-201ENST00000583708 TMEM30AQ9NV96 361 aa9.79□□□□□ -0.84
UBBP4-201ENST00000583708 OBP2AQ9NY56 170 aa9.79□□□□□ -0.84
UBBP4-201ENST00000583708 ADAMTS1Q9UHI8 967 aa9.79□□□□□ -0.84
UBBP4-201ENST00000583708 CDH7Q9ULB5 785 aa9.79□□□□□ -0.84
UBBP4-201ENST00000583708 USP15Q9Y4E8 981 aaPredicted RBP9.79□□□□□ -0.84
UBBP4-201ENST00000583708 SZT2Q5T011 3432 aa9.79□□□□□ -0.84
UBBP4-201ENST00000583708 AKR1B10O60218 316 aa9.78□□□□□ -0.84
UBBP4-201ENST00000583708 HSF2BPO75031 334 aa9.78□□□□□ -0.84
UBBP4-201ENST00000583708 USP17L7P0C7H9 530 aa9.78□□□□□ -0.84
UBBP4-201ENST00000583708 MYL4P12829 197 aa9.78□□□□□ -0.84
UBBP4-201ENST00000583708 DESP17661 470 aa9.78□□□□□ -0.84
UBBP4-201ENST00000583708 ADKP55263 362 aaKnown RBP9.78□□□□□ -0.84
UBBP4-201ENST00000583708 DAOAP59103 153 aa9.78□□□□□ -0.84
UBBP4-201ENST00000583708 YWHAZP63104 245 aaKnown RBP9.78□□□□□ -0.84
UBBP4-201ENST00000583708 COG7P83436 770 aa9.78□□□□□ -0.84
UBBP4-201ENST00000583708 SLC6A3Q01959 620 aa9.78□□□□□ -0.84
UBBP4-201ENST00000583708 NNTQ13423 1086 aa9.78□□□□□ -0.84
UBBP4-201ENST00000583708 CCDC142Q17RM4 750 aa9.78□□□□□ -0.84
UBBP4-201ENST00000583708 ASTE1Q2TB18 679 aaPredicted RBP9.78□□□□□ -0.84
UBBP4-201ENST00000583708 TAF3Q5VWG9 929 aa9.78□□□□□ -0.84
UBBP4-201ENST00000583708 PTCRAQ6ISU1 281 aaPredicted RBP9.78□□□□□ -0.84
UBBP4-201ENST00000583708 ALKBH5Q6P6C2 394 aaKnown RBP9.78□□□□□ -0.84
UBBP4-201ENST00000583708 GAREM2Q75VX8 874 aa9.78□□□□□ -0.84
UBBP4-201ENST00000583708 MTSS1LQ765P7 747 aa9.78□□□□□ -0.84
UBBP4-201ENST00000583708 SLC26A9Q7LBE3 791 aa9.78□□□□□ -0.84
UBBP4-201ENST00000583708 ZDHHC14Q8IZN3 488 aa9.78□□□□□ -0.84
UBBP4-201ENST00000583708 SCAMP5Q8TAC9 235 aa9.78□□□□□ -0.84
UBBP4-201ENST00000583708 SLC20A1Q8WUM9 679 aa9.78□□□□□ -0.84
UBBP4-201ENST00000583708 PPM1EQ8WY54 764 aa9.78□□□□□ -0.84
UBBP4-201ENST00000583708 MCRS1Q96EZ8 462 aa9.78□□□□□ -0.84
UBBP4-201ENST00000583708 IRX2Q9BZI1 471 aaPredicted RBP9.78□□□□□ -0.84
UBBP4-201ENST00000583708 ULBP1Q9BZM6 244 aa9.78□□□□□ -0.84
UBBP4-201ENST00000583708 ATXN3LQ9H3M9 355 aa9.78□□□□□ -0.84
UBBP4-201ENST00000583708 NHEJ1Q9H9Q4 299 aaPredicted RBP9.78□□□□□ -0.84
UBBP4-201ENST00000583708 MRPL47Q9HD33 250 aaKnown RBP9.78□□□□□ -0.84
UBBP4-201ENST00000583708 PARVAQ9NVD7 372 aa9.78□□□□□ -0.84
UBBP4-201ENST00000583708 ADAM22Q9P0K1 906 aa9.78□□□□□ -0.84
UBBP4-201ENST00000583708 ARHGAP20Q9P2F6 1191 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms