RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 SH3RF2Q8TEC5 729 aa13.3□□□□□ -0.28
SMARCE1-218ENST00000582955 NACA2Q9H009 215 aa13.3□□□□□ -0.28
SMARCE1-218ENST00000582955 TLR8Q9NR97 1041 aaKnown RBP13.3□□□□□ -0.28
SMARCE1-218ENST00000582955 GKN1Q9NS71 199 aa13.3□□□□□ -0.28
SMARCE1-218ENST00000582955 SMPD4Q9NXE4 827 aa13.3□□□□□ -0.28
SMARCE1-218ENST00000582955 APEX2Q9UBZ4 518 aa13.3□□□□□ -0.28
SMARCE1-218ENST00000582955 KIAA1257Q9ULG3 409 aa13.3□□□□□ -0.28
SMARCE1-218ENST00000582955 ARHGAP26Q9UNA1 814 aa13.3□□□□□ -0.28
SMARCE1-218ENST00000582955 SIT1Q9Y3P8 196 aa13.3□□□□□ -0.28
SMARCE1-218ENST00000582955 CPQQ9Y646 472 aa13.3□□□□□ -0.28
SMARCE1-218ENST00000582955 TICRRQ7Z2Z1 1910 aa13.3□□□□□ -0.28
SMARCE1-218ENST00000582955 COL4A3Q01955 1670 aa13.3□□□□□ -0.28
SMARCE1-218ENST00000582955 PATJQ8NI35 1801 aa13.29□□□□□ -0.28
SMARCE1-218ENST00000582955 KMT2EQ8IZD2 1858 aa13.29□□□□□ -0.28
SMARCE1-218ENST00000582955 FAM92AA1XBS5 289 aa13.29□□□□□ -0.28
SMARCE1-218ENST00000582955 RNF225M0QZC1 329 aaPredicted RBP13.29□□□□□ -0.28
SMARCE1-218ENST00000582955 O00370 1275 aa13.29□□□□□ -0.28
SMARCE1-218ENST00000582955 CYP26A1O43174 497 aa13.29□□□□□ -0.28
SMARCE1-218ENST00000582955 CALCAP01258 141 aa13.29□□□□□ -0.28
SMARCE1-218ENST00000582955 BRD2P25440 801 aaKnown RBP13.29□□□□□ -0.28
SMARCE1-218ENST00000582955 PON1P27169 355 aa13.29□□□□□ -0.28
SMARCE1-218ENST00000582955 KIF11P52732 1056 aa13.29□□□□□ -0.28
SMARCE1-218ENST00000582955 MYL5Q02045 173 aa13.29□□□□□ -0.28
SMARCE1-218ENST00000582955 APBA1Q02410 837 aa13.29□□□□□ -0.28
SMARCE1-218ENST00000582955 TNK2Q07912 1038 aa13.29□□□□□ -0.28
SMARCE1-218ENST00000582955 PDE4CQ08493 712 aa13.29□□□□□ -0.28
SMARCE1-218ENST00000582955 BST2Q10589 180 aaKnown RBP13.29□□□□□ -0.28
SMARCE1-218ENST00000582955 USP4Q13107 963 aa13.29□□□□□ -0.28
SMARCE1-218ENST00000582955 ZNF77Q15935 545 aa13.29□□□□□ -0.28
SMARCE1-218ENST00000582955 ARHGAP44Q17R89 818 aa13.29□□□□□ -0.28
SMARCE1-218ENST00000582955 MIIPQ5JXC2 388 aa13.29□□□□□ -0.28
SMARCE1-218ENST00000582955 TRIM68Q6AZZ1 485 aa13.29□□□□□ -0.28
SMARCE1-218ENST00000582955 ZNF852Q6ZMS4 543 aa13.29□□□□□ -0.28
SMARCE1-218ENST00000582955 ENOSF1Q7L5Y1 443 aa13.29□□□□□ -0.28
SMARCE1-218ENST00000582955 PIGZQ86VD9 579 aa13.29□□□□□ -0.28
SMARCE1-218ENST00000582955 PJA1Q8NG27 643 aa13.29□□□□□ -0.28
SMARCE1-218ENST00000582955 UBA3Q8TBC4 463 aa13.29□□□□□ -0.28
SMARCE1-218ENST00000582955 TFAP2BQ92481 460 aa13.29□□□□□ -0.28
SMARCE1-218ENST00000582955 FAM81BQ96LP2 452 aa13.29□□□□□ -0.28
SMARCE1-218ENST00000582955 RNF38Q9H0F5 515 aa13.29□□□□□ -0.28
SMARCE1-218ENST00000582955 CCSER2Q9H7U1 834 aa13.29□□□□□ -0.28
SMARCE1-218ENST00000582955 TAB2Q9NYJ8 693 aa13.29□□□□□ -0.28
SMARCE1-218ENST00000582955 GTSE1Q9NYZ3 720 aa13.29□□□□□ -0.28
SMARCE1-218ENST00000582955 SCML2Q9UQR0 700 aa13.29□□□□□ -0.28
SMARCE1-218ENST00000582955 MRPS17Q9Y2R5 130 aaKnown RBP13.29□□□□□ -0.28
SMARCE1-218ENST00000582955 MYO16Q9Y6X6 1858 aa13.29□□□□□ -0.28
SMARCE1-218ENST00000582955 ZNF318Q5VUA4 2279 aa13.28□□□□□ -0.28
SMARCE1-218ENST00000582955 FAM170BA6NMN3 283 aa13.28□□□□□ -0.28
SMARCE1-218ENST00000582955 M0QYV0 167 aa13.28□□□□□ -0.28
SMARCE1-218ENST00000582955 LEFTY2O00292 366 aa13.28□□□□□ -0.28
SMARCE1-218ENST00000582955 MAN2B1O00754 1011 aa13.28□□□□□ -0.28
SMARCE1-218ENST00000582955 XPO1O14980 1071 aaKnown RBP13.28□□□□□ -0.28
SMARCE1-218ENST00000582955 COCHO43405 550 aa13.28□□□□□ -0.28
SMARCE1-218ENST00000582955 OLFM2O95897 454 aa13.28□□□□□ -0.28
SMARCE1-218ENST00000582955 DCNP07585 359 aaKnown RBP13.28□□□□□ -0.28
SMARCE1-218ENST00000582955 TPM2P07951 284 aa13.28□□□□□ -0.28
SMARCE1-218ENST00000582955 ZDHHC11BP0C7U3 371 aa13.28□□□□□ -0.28
SMARCE1-218ENST00000582955 SETSIPP0DME0 302 aa13.28□□□□□ -0.28
SMARCE1-218ENST00000582955 ATXN8OSP0DMR3 200 aa13.28□□□□□ -0.28
SMARCE1-218ENST00000582955 USP8P40818 1118 aa13.28□□□□□ -0.28
SMARCE1-218ENST00000582955 SOX9P48436 509 aa13.28□□□□□ -0.28
SMARCE1-218ENST00000582955 IFNAR2P48551 515 aa13.28□□□□□ -0.28
SMARCE1-218ENST00000582955 TUBP50607 506 aa13.28□□□□□ -0.28
SMARCE1-218ENST00000582955 SLC7A9P82251 487 aa13.28□□□□□ -0.28
SMARCE1-218ENST00000582955 ITPRIPL2Q3MIP1 535 aa13.28□□□□□ -0.28
SMARCE1-218ENST00000582955 CDKAL1Q5VV42 579 aa13.28□□□□□ -0.28
SMARCE1-218ENST00000582955 SNX30Q5VWJ9 437 aa13.28□□□□□ -0.28
SMARCE1-218ENST00000582955 FAM3CQ92520 227 aa13.28□□□□□ -0.28
SMARCE1-218ENST00000582955 DDX23Q9BUQ8 820 aaKnown RBP13.28□□□□□ -0.28
SMARCE1-218ENST00000582955 EBF3Q9H4W6 596 aa13.28□□□□□ -0.28
SMARCE1-218ENST00000582955 C8orf33Q9H7E9 229 aaPredicted RBP13.28□□□□□ -0.28
SMARCE1-218ENST00000582955 LRRC4Q9HBW1 653 aa13.28□□□□□ -0.28
SMARCE1-218ENST00000582955 LTB4R2Q9NPC1 389 aa13.28□□□□□ -0.28
SMARCE1-218ENST00000582955 FANCLQ9NW38 375 aa13.28□□□□□ -0.28
SMARCE1-218ENST00000582955 DUS2Q9NX74 493 aaKnown RBP13.28□□□□□ -0.28
SMARCE1-218ENST00000582955 NAGPAQ9UK23 515 aa13.28□□□□□ -0.28
SMARCE1-218ENST00000582955 NDRG2Q9UN36 371 aaKnown RBP13.28□□□□□ -0.28
SMARCE1-218ENST00000582955 WNT6Q9Y6F9 365 aa13.28□□□□□ -0.28
SMARCE1-218ENST00000582955 COL4A2P08572 1712 aa13.27□□□□□ -0.28
SMARCE1-218ENST00000582955 HELZP42694 1942 aaKnown RBP13.27□□□□□ -0.28
SMARCE1-218ENST00000582955 A0A1W2PQH9 124 aa13.27□□□□□ -0.29
SMARCE1-218ENST00000582955 TULP2O00295 520 aa13.27□□□□□ -0.29
SMARCE1-218ENST00000582955 TLR5O60602 858 aa13.27□□□□□ -0.29
SMARCE1-218ENST00000582955 GLULP15104 373 aa13.27□□□□□ -0.29
SMARCE1-218ENST00000582955 ARSAP15289 507 aa13.27□□□□□ -0.29
SMARCE1-218ENST00000582955 PTMSP20962 102 aa13.27□□□□□ -0.29
SMARCE1-218ENST00000582955 TARSP26639 723 aaKnown RBP13.27□□□□□ -0.29
SMARCE1-218ENST00000582955 PGFP49763 221 aa13.27□□□□□ -0.29
SMARCE1-218ENST00000582955 TKTL1P51854 596 aa13.27□□□□□ -0.29
SMARCE1-218ENST00000582955 ZNF132P52740 706 aa13.27□□□□□ -0.29
SMARCE1-218ENST00000582955 RUNX3Q13761 415 aa13.27□□□□□ -0.29
SMARCE1-218ENST00000582955 PDGFRLQ15198 375 aa13.27□□□□□ -0.29
SMARCE1-218ENST00000582955 STILQ15468 1287 aa13.27□□□□□ -0.29
SMARCE1-218ENST00000582955 CNGA2Q16280 664 aa13.27□□□□□ -0.29
SMARCE1-218ENST00000582955 ANO6Q4KMQ2 910 aa13.27□□□□□ -0.29
SMARCE1-218ENST00000582955 LCLAT1Q6UWP7 414 aa13.27□□□□□ -0.29
SMARCE1-218ENST00000582955 CCDC186Q7Z3E2 898 aa13.27□□□□□ -0.29
SMARCE1-218ENST00000582955 DDX42Q86XP3 938 aaKnown RBP eCLIP13.27□□□□□ -0.29
SMARCE1-218ENST00000582955 CCDC105Q8IYK2 499 aa13.27□□□□□ -0.29
SMARCE1-218ENST00000582955 AOPEPQ8N6M6 819 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms