RNA–Protein interactions for RNA: ENST00000582892.1

NF1-222, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-222ENST00000582892 CCDC65Q8IXS2 484 aa7.92□□□□□ -1.14
NF1-222ENST00000582892 SPEM1Q8N4L4 309 aa7.92□□□□□ -1.14
NF1-222ENST00000582892 RNF10Q8N5U6 811 aaKnown RBP7.92□□□□□ -1.14
NF1-222ENST00000582892 DEFB124Q8NES8 71 aa7.92□□□□□ -1.14
NF1-222ENST00000582892 TTC8Q8TAM2 541 aa7.92□□□□□ -1.14
NF1-222ENST00000582892 CRYGNQ8WXF5 182 aa7.92□□□□□ -1.14
NF1-222ENST00000582892 HAS1Q92839 578 aa7.92□□□□□ -1.14
NF1-222ENST00000582892 DNASE1L2Q92874 299 aa7.92□□□□□ -1.14
NF1-222ENST00000582892 RSPRY1Q96DX4 576 aa7.92□□□□□ -1.14
NF1-222ENST00000582892 NLRP4Q96MN2 994 aa7.92□□□□□ -1.14
NF1-222ENST00000582892 ZSWIM3Q96MP5 696 aa7.92□□□□□ -1.14
NF1-222ENST00000582892 CEP89Q96ST8 783 aa7.92□□□□□ -1.14
NF1-222ENST00000582892 APOL6Q9BWW8 343 aa7.92□□□□□ -1.14
NF1-222ENST00000582892 TSPAN10Q9H1Z9 355 aaPredicted RBP7.92□□□□□ -1.14
NF1-222ENST00000582892 ZNF334Q9HCZ1 680 aaPredicted RBP7.92□□□□□ -1.14
NF1-222ENST00000582892 NEUROD4Q9HD90 331 aa7.92□□□□□ -1.14
NF1-222ENST00000582892 LUC7LQ9NQ29 371 aaKnown RBP7.92□□□□□ -1.14
NF1-222ENST00000582892 AGPAT5Q9NUQ2 364 aa7.92□□□□□ -1.14
NF1-222ENST00000582892 PCDHA12Q9UN75 941 aa7.92□□□□□ -1.14
NF1-222ENST00000582892 L1RE1Q9UN81 338 aa7.92□□□□□ -1.14
NF1-222ENST00000582892 NOVA2Q9UNW9 492 aaKnown RBP7.92□□□□□ -1.14
NF1-222ENST00000582892 MRPS23Q9Y3D9 190 aaKnown RBP7.92□□□□□ -1.14
NF1-222ENST00000582892 SAR1BQ9Y6B6 198 aa7.92□□□□□ -1.14
NF1-222ENST00000582892 ARID2Q68CP9 1835 aa7.92□□□□□ -1.14
NF1-222ENST00000582892 KIAA1549LQ6ZVL6 1849 aa7.92□□□□□ -1.14
NF1-222ENST00000582892 URB1O60287 2271 aaKnown RBP7.91□□□□□ -1.14
NF1-222ENST00000582892 LNP1A1A4G5 178 aa7.91□□□□□ -1.14
NF1-222ENST00000582892 CARNS1A5YM72 827 aa7.91□□□□□ -1.14
NF1-222ENST00000582892 SLC38A8A6NNN8 435 aa7.91□□□□□ -1.14
NF1-222ENST00000582892 PATE3B3GLJ2 98 aa7.91□□□□□ -1.14
NF1-222ENST00000582892 PES1O00541 588 aaKnown RBP7.91□□□□□ -1.14
NF1-222ENST00000582892 MAN2B1O00754 1011 aa7.91□□□□□ -1.14
NF1-222ENST00000582892 FOXD2O60548 495 aaPredicted RBP7.91□□□□□ -1.14
NF1-222ENST00000582892 TACC1O75410 805 aa7.91□□□□□ -1.14
NF1-222ENST00000582892 PAPSS2O95340 614 aaPredicted RBP7.91□□□□□ -1.14
NF1-222ENST00000582892 RHOP08100 348 aa7.91□□□□□ -1.14
NF1-222ENST00000582892 HNRNPA1P09651 372 aaKnown RBP eCLIP7.91□□□□□ -1.14
NF1-222ENST00000582892 MUTP22033 750 aa7.91□□□□□ -1.14
NF1-222ENST00000582892 GDI1P31150 447 aa7.91□□□□□ -1.14
NF1-222ENST00000582892 CIITAP33076 1130 aa7.91□□□□□ -1.14
NF1-222ENST00000582892 CNR2P34972 360 aa7.91□□□□□ -1.14
NF1-222ENST00000582892 SREBF1P36956 1147 aa7.91□□□□□ -1.14
NF1-222ENST00000582892 TARBP2Q15633 366 aaKnown RBP7.91□□□□□ -1.14
NF1-222ENST00000582892 HIF1AQ16665 826 aa7.91□□□□□ -1.14
NF1-222ENST00000582892 SWI5Q1ZZU3 235 aa7.91□□□□□ -1.14
NF1-222ENST00000582892 USP41Q3LFD5 358 aa7.91□□□□□ -1.14
NF1-222ENST00000582892 MTERF2Q49AM1 385 aa7.91□□□□□ -1.14
NF1-222ENST00000582892 FAM26FQ5R3K3 315 aa7.91□□□□□ -1.14
NF1-222ENST00000582892 ZNF771Q7L3S4 317 aaPredicted RBP7.91□□□□□ -1.14
NF1-222ENST00000582892 MAP4K3Q8IVH8 894 aa7.91□□□□□ -1.14
NF1-222ENST00000582892 ZNF295-AS1Q8N0V1 137 aa7.91□□□□□ -1.14
NF1-222ENST00000582892 ERMNQ8TAM6 284 aa7.91□□□□□ -1.14
NF1-222ENST00000582892 GTPBP3Q969Y2 492 aaKnown RBP7.91□□□□□ -1.14
NF1-222ENST00000582892 EXOC4Q96A65 974 aa7.91□□□□□ -1.14
NF1-222ENST00000582892 ELSPBP1Q96BH3 223 aa7.91□□□□□ -1.14
NF1-222ENST00000582892 PGBD4Q96DM1 585 aa7.91□□□□□ -1.14
NF1-222ENST00000582892 CCDC42Q96M95 316 aa7.91□□□□□ -1.14
NF1-222ENST00000582892 FAM20AQ96MK3 541 aa7.91□□□□□ -1.14
NF1-222ENST00000582892 PLIN2Q99541 437 aa7.91□□□□□ -1.14
NF1-222ENST00000582892 CXCL16Q9H2A7 254 aa7.91□□□□□ -1.14
NF1-222ENST00000582892 RUBCNLQ9H714 662 aa7.91□□□□□ -1.14
NF1-222ENST00000582892 IFT122Q9HBG6 1241 aa7.91□□□□□ -1.14
NF1-222ENST00000582892 SLC39A2Q9NP94 309 aa7.91□□□□□ -1.14
NF1-222ENST00000582892 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.91□□□□□ -1.14
NF1-222ENST00000582892 CEP72Q9P209 647 aa7.91□□□□□ -1.14
NF1-222ENST00000582892 RNF14Q9UBS8 474 aa7.91□□□□□ -1.14
NF1-222ENST00000582892 STK39Q9UEW8 545 aa7.91□□□□□ -1.14
NF1-222ENST00000582892 ADAM28Q9UKQ2 775 aa7.91□□□□□ -1.14
NF1-222ENST00000582892 GUCA1BQ9UMX6 200 aa7.91□□□□□ -1.14
NF1-222ENST00000582892 SSX2IPQ9Y2D8 614 aa7.91□□□□□ -1.14
NF1-222ENST00000582892 JRKLQ9Y4A0 524 aa7.91□□□□□ -1.14
NF1-222ENST00000582892 DAAM1Q9Y4D1 1078 aa7.91□□□□□ -1.14
NF1-222ENST00000582892 IPPQ9Y573 584 aa7.91□□□□□ -1.14
NF1-222ENST00000582892 PCDHA10Q9Y5I2 948 aa7.91□□□□□ -1.14
NF1-222ENST00000582892 COL4A3BPQ9Y5P4 624 aa7.91□□□□□ -1.14
NF1-222ENST00000582892 TNRC6BQ9UPQ9 1833 aaKnown RBP7.9□□□□□ -1.14
NF1-222ENST00000582892 IGKV6-21A0A0C4DH24 114 aa7.9□□□□□ -1.14
NF1-222ENST00000582892 A0A0U1RQJ8 604 aa7.9□□□□□ -1.14
NF1-222ENST00000582892 SPAARA0A1B0GVQ0 90 aa7.9□□□□□ -1.14
NF1-222ENST00000582892 ARNTLO00327 626 aa7.9□□□□□ -1.14
NF1-222ENST00000582892 CHMP2AO43633 222 aa7.9□□□□□ -1.14
NF1-222ENST00000582892 XYLBO75191 536 aa7.9□□□□□ -1.14
NF1-222ENST00000582892 RPP40O75818 363 aaKnown RBP7.9□□□□□ -1.14
NF1-222ENST00000582892 SASH3O75995 380 aa7.9□□□□□ -1.14
NF1-222ENST00000582892 SEC31AO94979 1220 aaKnown RBP7.9□□□□□ -1.14
NF1-222ENST00000582892 STBD1O95210 358 aa7.9□□□□□ -1.14
NF1-222ENST00000582892 PSAPP07602 524 aa7.9□□□□□ -1.14
NF1-222ENST00000582892 CYP3A4P08684 503 aa7.9□□□□□ -1.14
NF1-222ENST00000582892 GJA1P17302 382 aa7.9□□□□□ -1.14
NF1-222ENST00000582892 TCP1P17987 556 aaKnown RBP7.9□□□□□ -1.14
NF1-222ENST00000582892 ZNF76P36508 570 aa7.9□□□□□ -1.14
NF1-222ENST00000582892 PSMD5Q16401 504 aa7.9□□□□□ -1.14
NF1-222ENST00000582892 ASTE1Q2TB18 679 aaPredicted RBP7.9□□□□□ -1.14
NF1-222ENST00000582892 C10orf76Q5T2E6 689 aa7.9□□□□□ -1.14
NF1-222ENST00000582892 CCDC70Q6NSX1 233 aa7.9□□□□□ -1.14
NF1-222ENST00000582892 ZNF746Q6NUN9 644 aaPredicted RBP7.9□□□□□ -1.14
NF1-222ENST00000582892 PDXDC1Q6P996 788 aa7.9□□□□□ -1.14
NF1-222ENST00000582892 CACNA2D4Q7Z3S7 1137 aa7.9□□□□□ -1.14
NF1-222ENST00000582892 CDR2LQ86X02 465 aaPredicted RBP7.9□□□□□ -1.14
NF1-222ENST00000582892 CEP57Q86XR8 500 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms