RNA–Protein interactions for RNA: ENST00000582717.5

GGA3-214, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-214ENST00000582717 FAM110CQ1W6H9 321 aa14.24□□□□□ -0.13
GGA3-214ENST00000582717 DUSP28Q4G0W2 176 aa14.24□□□□□ -0.13
GGA3-214ENST00000582717 MARCH8Q5T0T0 291 aa14.24□□□□□ -0.13
GGA3-214ENST00000582717 JADE1Q6IE81 842 aa14.24□□□□□ -0.13
GGA3-214ENST00000582717 PLEKHH3Q7Z736 793 aa14.24□□□□□ -0.13
GGA3-214ENST00000582717 MTDHQ86UE4 582 aaKnown RBP14.24□□□□□ -0.13
GGA3-214ENST00000582717 C1orf127Q8N9H9 656 aa14.24□□□□□ -0.13
GGA3-214ENST00000582717 FAM136AQ96C01 138 aa14.24□□□□□ -0.13
GGA3-214ENST00000582717 BTBD10Q9BSF8 475 aa14.24□□□□□ -0.13
GGA3-214ENST00000582717 TINF2Q9BSI4 451 aa14.24□□□□□ -0.13
GGA3-214ENST00000582717 MMADHCQ9H3L0 296 aaPredicted RBP14.24□□□□□ -0.13
GGA3-214ENST00000582717 NPHS2Q9NP85 383 aa14.24□□□□□ -0.13
GGA3-214ENST00000582717 NXF1Q9UBU9 619 aaKnown RBP14.24□□□□□ -0.13
GGA3-214ENST00000582717 ZNF148Q9UQR1 794 aa14.24□□□□□ -0.13
GGA3-214ENST00000582717 SMIM24O75264 130 aa14.24□□□□□ -0.13
GGA3-214ENST00000582717 HAUS5O94927 633 aa14.24□□□□□ -0.13
GGA3-214ENST00000582717 PDHA1P08559 390 aa14.24□□□□□ -0.13
GGA3-214ENST00000582717 GSTA2P09210 222 aa14.24□□□□□ -0.13
GGA3-214ENST00000582717 HOXD8P13378 290 aaPredicted RBP14.24□□□□□ -0.13
GGA3-214ENST00000582717 PHBP35232 272 aa14.24□□□□□ -0.13
GGA3-214ENST00000582717 ARSEP51690 589 aa14.24□□□□□ -0.13
GGA3-214ENST00000582717 GEMIN4P57678 1058 aaKnown RBP14.24□□□□□ -0.13
GGA3-214ENST00000582717 GRIK4Q16099 956 aa14.24□□□□□ -0.13
GGA3-214ENST00000582717 SEPT7Q16181 437 aaKnown RBP14.24□□□□□ -0.13
GGA3-214ENST00000582717 TMEM154Q6P9G4 183 aa14.24□□□□□ -0.13
GGA3-214ENST00000582717 OR6J1Q8NGC5 347 aa14.24□□□□□ -0.13
GGA3-214ENST00000582717 FAM118BQ9BPY3 351 aa14.24□□□□□ -0.13
GGA3-214ENST00000582717 VPS11Q9H270 941 aa14.24□□□□□ -0.13
GGA3-214ENST00000582717 NMRK1Q9NWW6 199 aa14.24□□□□□ -0.13
GGA3-214ENST00000582717 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.24□□□□□ -0.13
GGA3-214ENST00000582717 KAT6AQ92794 2004 aa14.23□□□□□ -0.13
GGA3-214ENST00000582717 TLR3O15455 904 aaKnown RBP14.23□□□□□ -0.13
GGA3-214ENST00000582717 DNAJC6O75061 913 aa14.23□□□□□ -0.13
GGA3-214ENST00000582717 PTPN7P35236 360 aa14.23□□□□□ -0.13
GGA3-214ENST00000582717 PAPOLAP51003 745 aaKnown RBP14.23□□□□□ -0.13
GGA3-214ENST00000582717 ROR2Q01974 943 aaKnown RBP14.23□□□□□ -0.13
GGA3-214ENST00000582717 GPS1Q13098 491 aa14.23□□□□□ -0.13
GGA3-214ENST00000582717 RNASEH2BQ5TBB1 312 aaKnown RBP14.23□□□□□ -0.13
GGA3-214ENST00000582717 WDTC1Q8N5D0 677 aa14.23□□□□□ -0.13
GGA3-214ENST00000582717 CXorf38Q8TB03 319 aa14.23□□□□□ -0.13
GGA3-214ENST00000582717 ZFAND2BQ8WV99 257 aa14.23□□□□□ -0.13
GGA3-214ENST00000582717 TEKT4Q8WW24 435 aa14.23□□□□□ -0.13
GGA3-214ENST00000582717 NLRP7Q8WX94 980 aa14.23□□□□□ -0.13
GGA3-214ENST00000582717 MIPEPQ99797 713 aa14.23□□□□□ -0.13
GGA3-214ENST00000582717 CADM1Q9BY67 442 aaKnown RBP14.23□□□□□ -0.13
GGA3-214ENST00000582717 TRIM55Q9BYV6 548 aa14.23□□□□□ -0.13
GGA3-214ENST00000582717 SDCBP2Q9H190 292 aa14.23□□□□□ -0.13
GGA3-214ENST00000582717 PCDH9Q9HC56 1237 aa14.23□□□□□ -0.13
GGA3-214ENST00000582717 PAPOLBQ9NRJ5 636 aaKnown RBP14.23□□□□□ -0.13
GGA3-214ENST00000582717 IP6K2Q9UHH9 426 aa14.23□□□□□ -0.13
GGA3-214ENST00000582717 DNPEPQ9ULA0 475 aa14.23□□□□□ -0.13
GGA3-214ENST00000582717 ZNF236Q9UL36 1845 aa14.22□□□□□ -0.13
GGA3-214ENST00000582717 TSPAN1O60635 241 aa14.22□□□□□ -0.13
GGA3-214ENST00000582717 LSM8O95777 96 aaKnown RBP14.22□□□□□ -0.13
GGA3-214ENST00000582717 ITGB3P05106 788 aa14.22□□□□□ -0.13
GGA3-214ENST00000582717 KRT4P19013 534 aa14.22□□□□□ -0.13
GGA3-214ENST00000582717 SP100P23497 879 aaPredicted RBP14.22□□□□□ -0.13
GGA3-214ENST00000582717 RPL7AP62424 266 aaKnown RBP14.22□□□□□ -0.13
GGA3-214ENST00000582717 TNFAIP2Q03169 654 aa14.22□□□□□ -0.13
GGA3-214ENST00000582717 FASTKD3Q14CZ7 662 aaKnown RBP14.22□□□□□ -0.13
GGA3-214ENST00000582717 SLC10A6Q3KNW5 377 aa14.22□□□□□ -0.13
GGA3-214ENST00000582717 LRRC38Q5VT99 294 aa14.22□□□□□ -0.13
GGA3-214ENST00000582717 PCGF5Q86SE9 256 aa14.22□□□□□ -0.13
GGA3-214ENST00000582717 ZBED8Q8IZ13 594 aa14.22□□□□□ -0.13
GGA3-214ENST00000582717 C2orf69Q8N8R5 385 aa14.22□□□□□ -0.13
GGA3-214ENST00000582717 FEZF2Q8TBJ5 459 aa14.22□□□□□ -0.13
GGA3-214ENST00000582717 PTCD3Q96EY7 689 aaKnown RBP14.22□□□□□ -0.13
GGA3-214ENST00000582717 NSL1Q96IY1 281 aa14.22□□□□□ -0.13
GGA3-214ENST00000582717 SYT15Q9BQS2 421 aa14.22□□□□□ -0.13
GGA3-214ENST00000582717 MAK16Q9BXY0 300 aaKnown RBP14.22□□□□□ -0.13
GGA3-214ENST00000582717 BCO2Q9BYV7 579 aa14.22□□□□□ -0.13
GGA3-214ENST00000582717 ABHD16BQ9H3Z7 469 aa14.22□□□□□ -0.13
GGA3-214ENST00000582717 PARVAQ9NVD7 372 aa14.22□□□□□ -0.13
GGA3-214ENST00000582717 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.22□□□□□ -0.13
GGA3-214ENST00000582717 SCOCQ9UIL1 159 aa14.22□□□□□ -0.13
GGA3-214ENST00000582717 DOCK3Q8IZD9 2030 aa14.22□□□□□ -0.13
GGA3-214ENST00000582717 TCRBV5S1A1TA0A578 114 aa14.22□□□□□ -0.13
GGA3-214ENST00000582717 ANKRD33BA6NCL7 494 aa14.22□□□□□ -0.13
GGA3-214ENST00000582717 SIGLEC16A6NMB1 481 aa14.22□□□□□ -0.13
GGA3-214ENST00000582717 SSR1P43307 286 aaKnown RBP14.22□□□□□ -0.13
GGA3-214ENST00000582717 VCPP55072 806 aaKnown RBP14.22□□□□□ -0.13
GGA3-214ENST00000582717 CDH8P55286 799 aa14.22□□□□□ -0.13
GGA3-214ENST00000582717 KRT72Q14CN4 511 aa14.22□□□□□ -0.13
GGA3-214ENST00000582717 KLHL38Q2WGJ6 581 aa14.22□□□□□ -0.13
GGA3-214ENST00000582717 KHDC1Q4VXA5 237 aaKnown RBP14.22□□□□□ -0.13
GGA3-214ENST00000582717 ZNF667Q5HYK9 610 aa14.22□□□□□ -0.13
GGA3-214ENST00000582717 CWF19L1Q69YN2 538 aaKnown RBP14.22□□□□□ -0.13
GGA3-214ENST00000582717 HOMEZQ8IX15 550 aa14.22□□□□□ -0.13
GGA3-214ENST00000582717 KIAA0319LQ8IZA0 1049 aa14.22□□□□□ -0.13
GGA3-214ENST00000582717 ATP11CQ8NB49 1132 aa14.22□□□□□ -0.13
GGA3-214ENST00000582717 PPP1R13LQ8WUF5 828 aa14.22□□□□□ -0.13
GGA3-214ENST00000582717 NKD2Q969F2 451 aaPredicted RBP14.22□□□□□ -0.13
GGA3-214ENST00000582717 SLITRK1Q96PX8 696 aa14.22□□□□□ -0.13
GGA3-214ENST00000582717 TRAPPC9Q96Q05 1148 aa14.22□□□□□ -0.13
GGA3-214ENST00000582717 SMYD3Q9H7B4 428 aa14.22□□□□□ -0.13
GGA3-214ENST00000582717 CPSF2Q9P2I0 782 aaKnown RBP14.22□□□□□ -0.13
GGA3-214ENST00000582717 PCDHGC3Q9UN70 934 aa14.22□□□□□ -0.13
GGA3-214ENST00000582717 USTQ9Y2C2 406 aa14.22□□□□□ -0.13
GGA3-214ENST00000582717 MTO1Q9Y2Z2 717 aaKnown RBP14.22□□□□□ -0.13
GGA3-214ENST00000582717 A0A1W2PPM1 405 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms