RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 TRABD2BA6NFA1 517 aa8.15□□□□□ -1.1
CCDC47-205ENST00000582331 HUS1O60921 280 aa8.15□□□□□ -1.1
CCDC47-205ENST00000582331 CBFA2T3O75081 653 aa8.15□□□□□ -1.1
CCDC47-205ENST00000582331 ADH1CP00326 375 aa8.15□□□□□ -1.1
CCDC47-205ENST00000582331 PRB1P04280 392 aa8.15□□□□□ -1.1
CCDC47-205ENST00000582331 HOXB2P14652 356 aa8.15□□□□□ -1.1
CCDC47-205ENST00000582331 ACAT1P24752 427 aaKnown RBP8.15□□□□□ -1.1
CCDC47-205ENST00000582331 PNPLA4P41247 253 aa8.15□□□□□ -1.1
CCDC47-205ENST00000582331 ACOT2P49753 483 aa8.15□□□□□ -1.1
CCDC47-205ENST00000582331 SLC7A9P82251 487 aa8.15□□□□□ -1.1
CCDC47-205ENST00000582331 KDSRQ06136 332 aa8.15□□□□□ -1.1
CCDC47-205ENST00000582331 CYP4F3Q08477 520 aa8.15□□□□□ -1.1
CCDC47-205ENST00000582331 GNL2Q13823 731 aaKnown RBP8.15□□□□□ -1.1
CCDC47-205ENST00000582331 CFAP221Q4G0U5 840 aa8.15□□□□□ -1.1
CCDC47-205ENST00000582331 PREPLQ4J6C6 727 aaPredicted RBP8.15□□□□□ -1.1
CCDC47-205ENST00000582331 RHBDF2Q6PJF5 856 aa8.15□□□□□ -1.1
CCDC47-205ENST00000582331 DTHD1Q6ZMT9 781 aa8.15□□□□□ -1.1
CCDC47-205ENST00000582331 C12orf40Q86WS4 652 aa8.15□□□□□ -1.1
CCDC47-205ENST00000582331 SCUBE3Q8IX30 993 aa8.15□□□□□ -1.1
CCDC47-205ENST00000582331 PDCL2Q8N4E4 241 aa8.15□□□□□ -1.1
CCDC47-205ENST00000582331 SETD7Q8WTS6 366 aaKnown RBP8.15□□□□□ -1.1
CCDC47-205ENST00000582331 CRELD1Q96HD1 420 aa8.15□□□□□ -1.1
CCDC47-205ENST00000582331 ZNF419Q96HQ0 510 aaPredicted RBP8.15□□□□□ -1.1
CCDC47-205ENST00000582331 C8orf76Q96K31 380 aa8.15□□□□□ -1.1
CCDC47-205ENST00000582331 ZNF560Q96MR9 790 aa8.15□□□□□ -1.1
CCDC47-205ENST00000582331 MMTAG2Q9BU76 263 aaKnown RBP8.15□□□□□ -1.1
CCDC47-205ENST00000582331 TRPM5Q9NZQ8 1165 aa8.15□□□□□ -1.1
CCDC47-205ENST00000582331 KCND2Q9NZV8 630 aa8.15□□□□□ -1.1
CCDC47-205ENST00000582331 CALCOCO1Q9P1Z2 691 aa8.15□□□□□ -1.1
CCDC47-205ENST00000582331 PCOLCE2Q9UKZ9 415 aa8.15□□□□□ -1.1
CCDC47-205ENST00000582331 CEP192Q8TEP8 1941 aa8.15□□□□□ -1.11
CCDC47-205ENST00000582331 SCN1AP35498 2009 aa8.14□□□□□ -1.11
CCDC47-205ENST00000582331 CELSR3Q9NYQ7 3312 aa8.14□□□□□ -1.11
CCDC47-205ENST00000582331 TCHHQ07283 1943 aa8.14□□□□□ -1.11
CCDC47-205ENST00000582331 SCAMP3O14828 347 aaKnown RBP8.14□□□□□ -1.11
CCDC47-205ENST00000582331 NDUFS2O75306 463 aa8.14□□□□□ -1.11
CCDC47-205ENST00000582331 PLA2G4BP0C869 781 aa8.14□□□□□ -1.11
CCDC47-205ENST00000582331 ADH5P11766 374 aa8.14□□□□□ -1.11
CCDC47-205ENST00000582331 NTSR1P30989 418 aa8.14□□□□□ -1.11
CCDC47-205ENST00000582331 WASP42768 502 aa8.14□□□□□ -1.11
CCDC47-205ENST00000582331 MAGEA11P43364 429 aa8.14□□□□□ -1.11
CCDC47-205ENST00000582331 SLC12A3P55017 1021 aa8.14□□□□□ -1.11
CCDC47-205ENST00000582331 POU5F1Q01860 360 aaKnown RBP8.14□□□□□ -1.11
CCDC47-205ENST00000582331 GAD2Q05329 585 aa8.14□□□□□ -1.11
CCDC47-205ENST00000582331 GRIK2Q13002 908 aa8.14□□□□□ -1.11
CCDC47-205ENST00000582331 IL17AQ16552 155 aa8.14□□□□□ -1.11
CCDC47-205ENST00000582331 WDR45BQ5MNZ6 344 aa8.14□□□□□ -1.11
CCDC47-205ENST00000582331 BTBD8Q5XKL5 378 aa8.14□□□□□ -1.11
CCDC47-205ENST00000582331 ADALQ6DHV7 355 aa8.14□□□□□ -1.11
CCDC47-205ENST00000582331 SLFN12LQ6IEE8 588 aa8.14□□□□□ -1.11
CCDC47-205ENST00000582331 SDE2Q6IQ49 451 aa8.14□□□□□ -1.11
CCDC47-205ENST00000582331 SLC39A4Q6P5W5 647 aa8.14□□□□□ -1.11
CCDC47-205ENST00000582331 TMEM86AQ8N2M4 240 aa8.14□□□□□ -1.11
CCDC47-205ENST00000582331 GALNT15Q8N3T1 639 aa8.14□□□□□ -1.11
CCDC47-205ENST00000582331 KCTD17Q8N5Z5 321 aa8.14□□□□□ -1.11
CCDC47-205ENST00000582331 MYCT1Q8N699 235 aa8.14□□□□□ -1.11
CCDC47-205ENST00000582331 ZNF513Q8N8E2 541 aaPredicted RBP8.14□□□□□ -1.11
CCDC47-205ENST00000582331 FUBP3Q96I24 572 aaKnown RBP eCLIP8.14□□□□□ -1.11
CCDC47-205ENST00000582331 SPATA17Q96L03 361 aa8.14□□□□□ -1.11
CCDC47-205ENST00000582331 PLIN2Q99541 437 aa8.14□□□□□ -1.11
CCDC47-205ENST00000582331 PKMYT1Q99640 499 aa8.14□□□□□ -1.11
CCDC47-205ENST00000582331 KIF2CQ99661 725 aa8.14□□□□□ -1.11
CCDC47-205ENST00000582331 CDC6Q99741 560 aa8.14□□□□□ -1.11
CCDC47-205ENST00000582331 RNF38Q9H0F5 515 aa8.14□□□□□ -1.11
CCDC47-205ENST00000582331 SMPD4Q9NXE4 827 aa8.14□□□□□ -1.11
CCDC47-205ENST00000582331 EHD2Q9NZN4 543 aa8.14□□□□□ -1.11
CCDC47-205ENST00000582331 TBC1D14Q9P2M4 693 aa8.14□□□□□ -1.11
CCDC47-205ENST00000582331 MAGEC2Q9UBF1 373 aaPredicted RBP8.14□□□□□ -1.11
CCDC47-205ENST00000582331 L1RE1Q9UN81 338 aa8.14□□□□□ -1.11
CCDC47-205ENST00000582331 CYP8B1Q9UNU6 501 aa8.14□□□□□ -1.11
CCDC47-205ENST00000582331 CPQQ9Y646 472 aa8.14□□□□□ -1.11
CCDC47-205ENST00000582331 HELZ2Q9BYK8 2649 aaKnown RBP8.14□□□□□ -1.11
CCDC47-205ENST00000582331 GON4LQ3T8J9 2241 aa8.13□□□□□ -1.11
CCDC47-205ENST00000582331 A0A1B0GTW7 788 aa8.13□□□□□ -1.11
CCDC47-205ENST00000582331 A0A1W2PQF6 199 aa8.13□□□□□ -1.11
CCDC47-205ENST00000582331 ZNF840PA6NDX5 716 aa8.13□□□□□ -1.11
CCDC47-205ENST00000582331 ANKRD63C9JTQ0 380 aa8.13□□□□□ -1.11
CCDC47-205ENST00000582331 K7ENM7 598 aa8.13□□□□□ -1.11
CCDC47-205ENST00000582331 LAD1O00515 517 aa8.13□□□□□ -1.11
CCDC47-205ENST00000582331 IL18RAPO95256 599 aa8.13□□□□□ -1.11
CCDC47-205ENST00000582331 ADH1BP00325 375 aa8.13□□□□□ -1.11
CCDC47-205ENST00000582331 ABL1P00519 1130 aa8.13□□□□□ -1.11
CCDC47-205ENST00000582331 PLA2G2AP14555 144 aa8.13□□□□□ -1.11
CCDC47-205ENST00000582331 NDUFV2P19404 249 aa8.13□□□□□ -1.11
CCDC47-205ENST00000582331 MAOBP27338 520 aa8.13□□□□□ -1.11
CCDC47-205ENST00000582331 PCSK1P29120 753 aa8.13□□□□□ -1.11
CCDC47-205ENST00000582331 POLR2BP30876 1174 aaKnown RBP8.13□□□□□ -1.11
CCDC47-205ENST00000582331 ABCD1P33897 745 aa8.13□□□□□ -1.11
CCDC47-205ENST00000582331 GRIK1P39086 918 aa8.13□□□□□ -1.11
CCDC47-205ENST00000582331 PRPHP41219 470 aa8.13□□□□□ -1.11
CCDC47-205ENST00000582331 ABCG1P45844 678 aa8.13□□□□□ -1.11
CCDC47-205ENST00000582331 PPP3CCP48454 512 aa8.13□□□□□ -1.11
CCDC47-205ENST00000582331 LHX1P48742 406 aa8.13□□□□□ -1.11
CCDC47-205ENST00000582331 BECN1Q14457 450 aa8.13□□□□□ -1.11
CCDC47-205ENST00000582331 CCDC142Q17RM4 750 aa8.13□□□□□ -1.11
CCDC47-205ENST00000582331 ARSHQ5FYA8 562 aa8.13□□□□□ -1.11
CCDC47-205ENST00000582331 LY6G5CQ5SRR4 150 aa8.13□□□□□ -1.11
CCDC47-205ENST00000582331 HYIQ5T013 277 aa8.13□□□□□ -1.11
CCDC47-205ENST00000582331 Q6ZNB5 142 aa8.13□□□□□ -1.11
CCDC47-205ENST00000582331 C4orf50Q6ZRC1 276 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms