RNA–Protein interactions for RNA: ENST00000581967.1

CTC1-210, Transcript of CST telomere replication complex component 1, humanhuman

TSL 4

Gene CTC1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-210ENST00000581967 GABRG2P18507 467 aa6.96□□□□□ -1.3
CTC1-210ENST00000581967 GNL1P36915 607 aaPredicted RBP6.96□□□□□ -1.3
CTC1-210ENST00000581967 CASP5P51878 434 aa6.96□□□□□ -1.3
CTC1-210ENST00000581967 FAM193AP78312 1265 aa6.96□□□□□ -1.3
CTC1-210ENST00000581967 RPL6Q02878 288 aaKnown RBP6.96□□□□□ -1.3
CTC1-210ENST00000581967 GAD2Q05329 585 aa6.96□□□□□ -1.3
CTC1-210ENST00000581967 KDSRQ06136 332 aa6.96□□□□□ -1.3
CTC1-210ENST00000581967 SLC14A1Q13336 389 aa6.96□□□□□ -1.3
CTC1-210ENST00000581967 RABEP1Q15276 862 aa6.96□□□□□ -1.3
CTC1-210ENST00000581967 SF3A1Q15459 793 aaKnown RBP6.96□□□□□ -1.3
CTC1-210ENST00000581967 SURF1Q15526 300 aa6.96□□□□□ -1.3
CTC1-210ENST00000581967 PREPLQ4J6C6 727 aaPredicted RBP6.96□□□□□ -1.3
CTC1-210ENST00000581967 MDH1BQ5I0G3 518 aa6.96□□□□□ -1.3
CTC1-210ENST00000581967 RRAGBQ5VZM2 374 aa6.96□□□□□ -1.3
CTC1-210ENST00000581967 BTBD8Q5XKL5 378 aa6.96□□□□□ -1.3
CTC1-210ENST00000581967 LARP1BQ659C4 914 aaKnown RBP6.96□□□□□ -1.3
CTC1-210ENST00000581967 NUDT18Q6ZVK8 323 aa6.96□□□□□ -1.3
CTC1-210ENST00000581967 SV2BQ7L1I2 683 aa6.96□□□□□ -1.3
CTC1-210ENST00000581967 TRMT11Q7Z4G4 463 aaKnown RBP6.96□□□□□ -1.3
CTC1-210ENST00000581967 PROSER1Q86XN7 944 aa6.96□□□□□ -1.3
CTC1-210ENST00000581967 ABCA7Q8IZY2 2146 aa6.96□□□□□ -1.3
CTC1-210ENST00000581967 PGBD3Q8N328 593 aa6.96□□□□□ -1.3
CTC1-210ENST00000581967 GPD1LQ8N335 351 aa6.96□□□□□ -1.3
CTC1-210ENST00000581967 CHCHD4Q8N4Q1 142 aa6.96□□□□□ -1.3
CTC1-210ENST00000581967 MINDY1Q8N5J2 469 aa6.96□□□□□ -1.3
CTC1-210ENST00000581967 PDZD8Q8NEN9 1154 aa6.96□□□□□ -1.3
CTC1-210ENST00000581967 OR5B17Q8NGF7 314 aa6.96□□□□□ -1.3
CTC1-210ENST00000581967 OVCA2Q8WZ82 227 aa6.96□□□□□ -1.3
CTC1-210ENST00000581967 ZFRQ96KR1 1074 aaKnown RBP6.96□□□□□ -1.3
CTC1-210ENST00000581967 SLITRK1Q96PX8 696 aa6.96□□□□□ -1.3
CTC1-210ENST00000581967 MMS19Q96T76 1030 aa6.96□□□□□ -1.3
CTC1-210ENST00000581967 GTPBP2Q9BX10 602 aaKnown RBP6.96□□□□□ -1.3
CTC1-210ENST00000581967 ELOVL4Q9GZR5 314 aa6.96□□□□□ -1.3
CTC1-210ENST00000581967 SNX25Q9H3E2 840 aa6.96□□□□□ -1.3
CTC1-210ENST00000581967 PCIF1Q9H4Z3 704 aa6.96□□□□□ -1.3
CTC1-210ENST00000581967 FSCN3Q9NQT6 498 aa6.96□□□□□ -1.3
CTC1-210ENST00000581967 CALCOCO1Q9P1Z2 691 aa6.96□□□□□ -1.3
CTC1-210ENST00000581967 DEC1Q9P2X7 70 aa6.96□□□□□ -1.3
CTC1-210ENST00000581967 PTPRJQ12913 1337 aa6.96□□□□□ -1.3
CTC1-210ENST00000581967 ATXN2Q99700 1313 aaKnown RBP6.96□□□□□ -1.3
CTC1-210ENST00000581967 CACNA1EQ15878 2313 aa6.95□□□□□ -1.3
CTC1-210ENST00000581967 DMXL2Q8TDJ6 3036 aa6.95□□□□□ -1.3
CTC1-210ENST00000581967 IGHV1OR15-9A0A0B4J2B8 117 aa6.95□□□□□ -1.3
CTC1-210ENST00000581967 A0A1W2PQD8 194 aa6.95□□□□□ -1.3
CTC1-210ENST00000581967 ARHGAP33O14559 1287 aa6.95□□□□□ -1.3
CTC1-210ENST00000581967 ZBTB24O43167 697 aaPredicted RBP6.95□□□□□ -1.3
CTC1-210ENST00000581967 ZNF217O75362 1048 aa6.95□□□□□ -1.3
CTC1-210ENST00000581967 TULP3O75386 442 aa6.95□□□□□ -1.3
CTC1-210ENST00000581967 PRPF6O94906 941 aaKnown RBP6.95□□□□□ -1.3
CTC1-210ENST00000581967 RTN3O95197 1032 aaPredicted RBP6.95□□□□□ -1.3
CTC1-210ENST00000581967 SYPP08247 313 aa6.95□□□□□ -1.3
CTC1-210ENST00000581967 MBL2P11226 248 aaPredicted RBP6.95□□□□□ -1.3
CTC1-210ENST00000581967 IDEP14735 1019 aa6.95□□□□□ -1.3
CTC1-210ENST00000581967 YWHAQP27348 245 aa6.95□□□□□ -1.3
CTC1-210ENST00000581967 NTSR1P30989 418 aa6.95□□□□□ -1.3
CTC1-210ENST00000581967 TUBP50607 506 aa6.95□□□□□ -1.3
CTC1-210ENST00000581967 CACNA2D1P54289 1103 aa6.95□□□□□ -1.3
CTC1-210ENST00000581967 ZNF33AQ06730 810 aa6.95□□□□□ -1.3
CTC1-210ENST00000581967 TRIP6Q15654 476 aaKnown RBP6.95□□□□□ -1.3
CTC1-210ENST00000581967 C10orf76Q5T2E6 689 aa6.95□□□□□ -1.3
CTC1-210ENST00000581967 HECTD3Q5T447 861 aa6.95□□□□□ -1.3
CTC1-210ENST00000581967 SNX30Q5VWJ9 437 aa6.95□□□□□ -1.3
CTC1-210ENST00000581967 HS2ST1Q7LGA3 356 aa6.95□□□□□ -1.3
CTC1-210ENST00000581967 TRAPPC11Q7Z392 1133 aa6.95□□□□□ -1.3
CTC1-210ENST00000581967 TMEM25Q86YD3 366 aa6.95□□□□□ -1.3
CTC1-210ENST00000581967 CBWD2Q8IUF1 395 aa6.95□□□□□ -1.3
CTC1-210ENST00000581967 WDR49Q8IV35 697 aa6.95□□□□□ -1.3
CTC1-210ENST00000581967 NUP93Q8N1F7 819 aa6.95□□□□□ -1.3
CTC1-210ENST00000581967 DEFB119Q8N690 84 aa6.95□□□□□ -1.3
CTC1-210ENST00000581967 ZNF513Q8N8E2 541 aaPredicted RBP6.95□□□□□ -1.3
CTC1-210ENST00000581967 NOC3LQ8WTT2 800 aaKnown RBP6.95□□□□□ -1.3
CTC1-210ENST00000581967 FBXO32Q969P5 355 aa6.95□□□□□ -1.3
CTC1-210ENST00000581967 MRPL45Q9BRJ2 306 aaKnown RBP6.95□□□□□ -1.3
CTC1-210ENST00000581967 B3GNT5Q9BYG0 378 aa6.95□□□□□ -1.3
CTC1-210ENST00000581967 FGFBP2Q9BYJ0 223 aa6.95□□□□□ -1.3
CTC1-210ENST00000581967 ZNF518BQ9C0D4 1074 aa6.95□□□□□ -1.3
CTC1-210ENST00000581967 FAM124BQ9H5Z6 455 aaPredicted RBP6.95□□□□□ -1.3
CTC1-210ENST00000581967 KIAA1586Q9HCI6 787 aa6.95□□□□□ -1.3
CTC1-210ENST00000581967 CD248Q9HCU0 757 aa6.95□□□□□ -1.3
CTC1-210ENST00000581967 ZDHHC4Q9NPG8 344 aa6.95□□□□□ -1.3
CTC1-210ENST00000581967 SPHK2Q9NRA0 654 aa6.95□□□□□ -1.3
CTC1-210ENST00000581967 TMEM30AQ9NV96 361 aa6.95□□□□□ -1.3
CTC1-210ENST00000581967 PANK4Q9NVE7 773 aa6.95□□□□□ -1.3
CTC1-210ENST00000581967 IL37Q9NZH6 218 aa6.95□□□□□ -1.3
CTC1-210ENST00000581967 FBXO2Q9UK22 296 aaPredicted RBP6.95□□□□□ -1.3
CTC1-210ENST00000581967 HCN2Q9UL51 889 aa6.95□□□□□ -1.3
CTC1-210ENST00000581967 SMC3Q9UQE7 1217 aa6.95□□□□□ -1.3
CTC1-210ENST00000581967 STARD13Q9Y3M8 1113 aa6.95□□□□□ -1.3
CTC1-210ENST00000581967 NME7Q9Y5B8 376 aa6.95□□□□□ -1.3
CTC1-210ENST00000581967 SRPRBQ9Y5M8 271 aaKnown RBP6.95□□□□□ -1.3
CTC1-210ENST00000581967 ATG2BQ96BY7 2078 aa6.95□□□□□ -1.3
CTC1-210ENST00000581967 DENND4CQ5VZ89 1909 aa6.94□□□□□ -1.3
CTC1-210ENST00000581967 SH3BP5O60239 455 aa6.94□□□□□ -1.3
CTC1-210ENST00000581967 GJB3O75712 270 aa6.94□□□□□ -1.3
CTC1-210ENST00000581967 CST3P01034 146 aaPredicted RBP6.94□□□□□ -1.3
CTC1-210ENST00000581967 ZDHHC11BP0C7U3 371 aa6.94□□□□□ -1.3
CTC1-210ENST00000581967 HOXB2P14652 356 aa6.94□□□□□ -1.3
CTC1-210ENST00000581967 TXLNAP40222 546 aa6.94□□□□□ -1.3
CTC1-210ENST00000581967 SCAPQ12770 1279 aa6.94□□□□□ -1.3
CTC1-210ENST00000581967 WDR72Q3MJ13 1102 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms