RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 FGF18O76093 207 aa5.44□□□□□ -1.54
SMCHD1-204ENST00000581226 PRKCBP05771 671 aa5.44□□□□□ -1.54
SMCHD1-204ENST00000581226 DLDP09622 509 aaKnown RBP5.44□□□□□ -1.54
SMCHD1-204ENST00000581226 HARSP12081 509 aaKnown RBP5.44□□□□□ -1.54
SMCHD1-204ENST00000581226 DRD4P21917 467 aa5.44□□□□□ -1.54
SMCHD1-204ENST00000581226 TBC1D25Q3MII6 688 aa5.44□□□□□ -1.54
SMCHD1-204ENST00000581226 PCID2Q5JVF3 399 aa5.44□□□□□ -1.54
SMCHD1-204ENST00000581226 MANEALQ5VSG8 457 aa5.44□□□□□ -1.54
SMCHD1-204ENST00000581226 IZUMO3Q5VZ72 239 aa5.44□□□□□ -1.54
SMCHD1-204ENST00000581226 MZT2AQ6P582 158 aa5.44□□□□□ -1.54
SMCHD1-204ENST00000581226 Q6ZWC4 215 aa5.44□□□□□ -1.54
SMCHD1-204ENST00000581226 KRT28Q7Z3Y7 464 aa5.44□□□□□ -1.54
SMCHD1-204ENST00000581226 RAB11FIP4Q86YS3 637 aa5.44□□□□□ -1.54
SMCHD1-204ENST00000581226 FAM186BQ8IYM0 893 aa5.44□□□□□ -1.54
SMCHD1-204ENST00000581226 ACRBPQ8NEB7 543 aa5.44□□□□□ -1.54
SMCHD1-204ENST00000581226 RP9Q8TA86 221 aaKnown RBP5.44□□□□□ -1.54
SMCHD1-204ENST00000581226 RSPRY1Q96DX4 576 aa5.44□□□□□ -1.54
SMCHD1-204ENST00000581226 VN1R3Q9BXE9 311 aa5.44□□□□□ -1.54
SMCHD1-204ENST00000581226 ZNF700Q9H0M5 742 aa5.44□□□□□ -1.54
SMCHD1-204ENST00000581226 NLRC4Q9NPP4 1024 aa5.44□□□□□ -1.54
SMCHD1-204ENST00000581226 C11orf21Q9P2W6 132 aa5.44□□□□□ -1.54
SMCHD1-204ENST00000581226 DNAJB11Q9UBS4 358 aa5.44□□□□□ -1.54
SMCHD1-204ENST00000581226 GABRQQ9UN88 632 aa5.44□□□□□ -1.54
SMCHD1-204ENST00000581226 CEP83Q9Y592 693 aa5.44□□□□□ -1.54
SMCHD1-204ENST00000581226 FER1L4A9Z1Z3 1794 aa5.44□□□□□ -1.54
SMCHD1-204ENST00000581226 AP4M1O00189 453 aa5.43□□□□□ -1.54
SMCHD1-204ENST00000581226 SNX2O60749 519 aa5.43□□□□□ -1.54
SMCHD1-204ENST00000581226 NPSP0C0P6 89 aa5.43□□□□□ -1.54
SMCHD1-204ENST00000581226 MYL4P12829 197 aa5.43□□□□□ -1.54
SMCHD1-204ENST00000581226 ITPKBP27987 946 aa5.43□□□□□ -1.54
SMCHD1-204ENST00000581226 CTGFP29279 349 aa5.43□□□□□ -1.54
SMCHD1-204ENST00000581226 NTSR1P30989 418 aa5.43□□□□□ -1.54
SMCHD1-204ENST00000581226 SOX10P56693 466 aa5.43□□□□□ -1.54
SMCHD1-204ENST00000581226 INHBEP58166 350 aa5.43□□□□□ -1.54
SMCHD1-204ENST00000581226 TIRAPP58753 221 aa5.43□□□□□ -1.54
SMCHD1-204ENST00000581226 TIAL1Q01085 375 aaKnown RBP eCLIP5.43□□□□□ -1.54
SMCHD1-204ENST00000581226 UBE4AQ14139 1066 aa5.43□□□□□ -1.54
SMCHD1-204ENST00000581226 AARS2Q5JTZ9 985 aaKnown RBP5.43□□□□□ -1.54
SMCHD1-204ENST00000581226 CRTC1Q6UUV9 634 aa5.43□□□□□ -1.54
SMCHD1-204ENST00000581226 DPY19L3Q6ZPD9 716 aa5.43□□□□□ -1.54
SMCHD1-204ENST00000581226 GJA10Q969M2 543 aa5.43□□□□□ -1.54
SMCHD1-204ENST00000581226 HIST1H2AAQ96QV6 131 aa5.43□□□□□ -1.54
SMCHD1-204ENST00000581226 CERS4Q9HA82 394 aa5.43□□□□□ -1.54
SMCHD1-204ENST00000581226 SEMA4GQ9NTN9 838 aa5.43□□□□□ -1.54
SMCHD1-204ENST00000581226 MAN2B2Q9Y2E5 1009 aa5.43□□□□□ -1.54
SMCHD1-204ENST00000581226 A0A087WZ62 844 aa5.42□□□□□ -1.54
SMCHD1-204ENST00000581226 AGPSO00116 658 aa5.42□□□□□ -1.54
SMCHD1-204ENST00000581226 EXOC5O00471 708 aa5.42□□□□□ -1.54
SMCHD1-204ENST00000581226 PMPCBO75439 489 aa5.42□□□□□ -1.54
SMCHD1-204ENST00000581226 IGLV2-14P01704 120 aa5.42□□□□□ -1.54
SMCHD1-204ENST00000581226 HNRNPCP07910 306 aaKnown RBP eCLIP5.42□□□□□ -1.54
SMCHD1-204ENST00000581226 WT1P19544 449 aaPredicted RBP5.42□□□□□ -1.54
SMCHD1-204ENST00000581226 GPD1P21695 349 aa5.42□□□□□ -1.54
SMCHD1-204ENST00000581226 ATICP31939 592 aa5.42□□□□□ -1.54
SMCHD1-204ENST00000581226 COPAP53621 1224 aa5.42□□□□□ -1.54
SMCHD1-204ENST00000581226 CYP1B1Q16678 543 aa5.42□□□□□ -1.54
SMCHD1-204ENST00000581226 L1TD1Q5T7N2 865 aaKnown RBP5.42□□□□□ -1.54
SMCHD1-204ENST00000581226 FBXO42Q6P3S6 717 aa5.42□□□□□ -1.54
SMCHD1-204ENST00000581226 AMIGO2Q86SJ2 522 aa5.42□□□□□ -1.54
SMCHD1-204ENST00000581226 SIRT6Q8N6T7 355 aa5.42□□□□□ -1.54
SMCHD1-204ENST00000581226 C11orf44Q8N8P7 122 aa5.42□□□□□ -1.54
SMCHD1-204ENST00000581226 BOLLQ8N9W6 283 aaKnown RBP5.42□□□□□ -1.54
SMCHD1-204ENST00000581226 FANCBQ8NB91 859 aa5.42□□□□□ -1.54
SMCHD1-204ENST00000581226 ABHD11Q8NFV4 315 aa5.42□□□□□ -1.54
SMCHD1-204ENST00000581226 DEPTORQ8TB45 409 aa5.42□□□□□ -1.54
SMCHD1-204ENST00000581226 TBC1D5Q92609 795 aa5.42□□□□□ -1.54
SMCHD1-204ENST00000581226 ZNF566Q969W8 418 aa5.42□□□□□ -1.54
SMCHD1-204ENST00000581226 SGCZQ96LD1 299 aa5.42□□□□□ -1.54
SMCHD1-204ENST00000581226 FAM227BQ96M60 508 aa5.42□□□□□ -1.54
SMCHD1-204ENST00000581226 PRR25Q96S07 402 aa5.42□□□□□ -1.54
SMCHD1-204ENST00000581226 FSD1LQ9BXM9 530 aa5.42□□□□□ -1.54
SMCHD1-204ENST00000581226 EIF2AQ9BY44 585 aaKnown RBP5.42□□□□□ -1.54
SMCHD1-204ENST00000581226 ZCWPW1Q9H0M4 648 aa5.42□□□□□ -1.54
SMCHD1-204ENST00000581226 SLC25A32Q9H2D1 315 aa5.42□□□□□ -1.54
SMCHD1-204ENST00000581226 ADAMTS5Q9UNA0 930 aa5.42□□□□□ -1.54
SMCHD1-204ENST00000581226 TJP3O95049 919 aa5.41□□□□□ -1.54
SMCHD1-204ENST00000581226 NDST3O95803 873 aa5.41□□□□□ -1.54
SMCHD1-204ENST00000581226 IDEP14735 1019 aa5.41□□□□□ -1.54
SMCHD1-204ENST00000581226 YY1P25490 414 aa5.41□□□□□ -1.54
SMCHD1-204ENST00000581226 GKP32189 559 aa5.41□□□□□ -1.54
SMCHD1-204ENST00000581226 ELLP55199 621 aaPredicted RBP5.41□□□□□ -1.54
SMCHD1-204ENST00000581226 SUMO2P61956 95 aaKnown RBP5.41□□□□□ -1.54
SMCHD1-204ENST00000581226 E2F1Q01094 437 aa5.41□□□□□ -1.54
SMCHD1-204ENST00000581226 BRD3Q15059 726 aa5.41□□□□□ -1.54
SMCHD1-204ENST00000581226 SMN1Q16637 294 aaKnown RBP5.41□□□□□ -1.54
SMCHD1-204ENST00000581226 SLC35G1Q2M3R5 365 aa5.41□□□□□ -1.54
SMCHD1-204ENST00000581226 CEP85Q6P2H3 762 aa5.41□□□□□ -1.54
SMCHD1-204ENST00000581226 MTHFD1LQ6UB35 978 aa5.41□□□□□ -1.54
SMCHD1-204ENST00000581226 CLEC9AQ6UXN8 241 aa5.41□□□□□ -1.54
SMCHD1-204ENST00000581226 NAPRTQ6XQN6 538 aa5.41□□□□□ -1.54
SMCHD1-204ENST00000581226 SLC29A4Q7RTT9 530 aa5.41□□□□□ -1.54
SMCHD1-204ENST00000581226 ZNF804AQ7Z570 1209 aa5.41□□□□□ -1.54
SMCHD1-204ENST00000581226 SNX27Q96L92 541 aa5.41□□□□□ -1.54
SMCHD1-204ENST00000581226 PRDM13Q9H4Q3 707 aa5.41□□□□□ -1.54
SMCHD1-204ENST00000581226 ZBTB26Q9HCK0 441 aa5.41□□□□□ -1.54
SMCHD1-204ENST00000581226 NKX1-2Q9UD57 310 aaPredicted RBP5.41□□□□□ -1.54
SMCHD1-204ENST00000581226 ADAM21Q9UKJ8 722 aa5.41□□□□□ -1.54
SMCHD1-204ENST00000581226 PCDHGB2Q9Y5G2 931 aa5.41□□□□□ -1.54
SMCHD1-204ENST00000581226 SPATA31A6Q5VVP1 1343 aa5.41□□□□□ -1.54
SMCHD1-204ENST00000581226 COL11A2P13942 1736 aaPredicted RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms