RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 MDM1Q8TC05 714 aa20.67■□□□□ 0.9
LIMD2-209ENST00000580222 RPF1Q9H9Y2 349 aaKnown RBP20.67■□□□□ 0.9
LIMD2-209ENST00000580222 CAPN10Q9HC96 672 aa20.67■□□□□ 0.9
LIMD2-209ENST00000580222 SLC6A14Q9UN76 642 aa20.67■□□□□ 0.9
LIMD2-209ENST00000580222 RAXQ9Y2V3 346 aa20.67■□□□□ 0.9
LIMD2-209ENST00000580222 APC2O95996 2303 aa20.67■□□□□ 0.9
LIMD2-209ENST00000580222 KIAA1549LQ6ZVL6 1849 aa20.67■□□□□ 0.9
LIMD2-209ENST00000580222 MYO16Q9Y6X6 1858 aa20.67■□□□□ 0.9
LIMD2-209ENST00000580222 TISP43B9A030 160 aa20.66■□□□□ 0.9
LIMD2-209ENST00000580222 ANKRD63C9JTQ0 380 aa20.66■□□□□ 0.9
LIMD2-209ENST00000580222 KLF8O95600 359 aaPredicted RBP20.66■□□□□ 0.9
LIMD2-209ENST00000580222 HOXD13P35453 343 aa20.66■□□□□ 0.9
LIMD2-209ENST00000580222 PPP1R2P41236 205 aa20.66■□□□□ 0.9
LIMD2-209ENST00000580222 PRCPP42785 496 aa20.66■□□□□ 0.9
LIMD2-209ENST00000580222 ZNF423Q2M1K9 1284 aa20.66■□□□□ 0.9
LIMD2-209ENST00000580222 COBLL1Q53SF7 1204 aa20.66■□□□□ 0.9
LIMD2-209ENST00000580222 SLC39A4Q6P5W5 647 aa20.66■□□□□ 0.9
LIMD2-209ENST00000580222 SASS6Q6UVJ0 657 aa20.66■□□□□ 0.9
LIMD2-209ENST00000580222 CCNI2Q6ZMN8 369 aaPredicted RBP20.66■□□□□ 0.9
LIMD2-209ENST00000580222 HS2ST1Q7LGA3 356 aa20.66■□□□□ 0.9
LIMD2-209ENST00000580222 PCDHB5Q9Y5E4 795 aa20.66■□□□□ 0.9
LIMD2-209ENST00000580222 TSC2P49815 1807 aa20.66■□□□□ 0.9
LIMD2-209ENST00000580222 MAST4O15021 2626 aa20.66■□□□□ 0.9
LIMD2-209ENST00000580222 OGTO15294 1046 aa20.65■□□□□ 0.9
LIMD2-209ENST00000580222 XPOTO43592 962 aaKnown RBP20.65■□□□□ 0.9
LIMD2-209ENST00000580222 SH3BP5O60239 455 aa20.65■□□□□ 0.9
LIMD2-209ENST00000580222 ADAM23O75077 832 aa20.65■□□□□ 0.9
LIMD2-209ENST00000580222 NOL4O94818 638 aa20.65■□□□□ 0.9
LIMD2-209ENST00000580222 CKMP06732 381 aa20.65■□□□□ 0.9
LIMD2-209ENST00000580222 USP17L7P0C7H9 530 aa20.65■□□□□ 0.9
LIMD2-209ENST00000580222 CSH1P0DML2 217 aa20.65■□□□□ 0.9
LIMD2-209ENST00000580222 CSH2P0DML3 217 aa20.65■□□□□ 0.9
LIMD2-209ENST00000580222 BMP6P22004 513 aa20.65■□□□□ 0.9
LIMD2-209ENST00000580222 CYP2F1P24903 491 aa20.65■□□□□ 0.9
LIMD2-209ENST00000580222 SCARA3Q6AZY7 606 aa20.65■□□□□ 0.9
LIMD2-209ENST00000580222 SLFN12LQ6IEE8 588 aa20.65■□□□□ 0.9
LIMD2-209ENST00000580222 THEM5Q8N1Q8 247 aa20.65■□□□□ 0.9
LIMD2-209ENST00000580222 HDDC3Q8N4P3 179 aa20.65■□□□□ 0.9
LIMD2-209ENST00000580222 MINDY1Q8N5J2 469 aa20.65■□□□□ 0.9
LIMD2-209ENST00000580222 ADAM32Q8TC27 787 aa20.65■□□□□ 0.9
LIMD2-209ENST00000580222 HMGB4Q8WW32 186 aa20.65■□□□□ 0.9
LIMD2-209ENST00000580222 POMGNT1Q8WZA1 660 aa20.65■□□□□ 0.9
LIMD2-209ENST00000580222 LRIG1Q96JA1 1093 aa20.65■□□□□ 0.9
LIMD2-209ENST00000580222 CPSF3Q9UKF6 684 aaKnown RBP20.65■□□□□ 0.9
LIMD2-209ENST00000580222 DSEQ9UL01 958 aa20.65■□□□□ 0.9
LIMD2-209ENST00000580222 TRAV19A0A0A6YYK7 116 aa20.64■□□□□ 0.89
LIMD2-209ENST00000580222 PSMA7O14818 248 aa20.64■□□□□ 0.89
LIMD2-209ENST00000580222 OPHN1O60890 802 aa20.64■□□□□ 0.89
LIMD2-209ENST00000580222 LETM1O95202 739 aaPredicted RBP20.64■□□□□ 0.89
LIMD2-209ENST00000580222 TIE1P35590 1138 aa20.64■□□□□ 0.89
LIMD2-209ENST00000580222 SMARCB1Q12824 385 aa20.64■□□□□ 0.89
LIMD2-209ENST00000580222 NR1H3Q13133 447 aa20.64■□□□□ 0.89
LIMD2-209ENST00000580222 KLHL10Q6JEL2 608 aa20.64■□□□□ 0.89
LIMD2-209ENST00000580222 METTL23Q86XA0 190 aa20.64■□□□□ 0.89
LIMD2-209ENST00000580222 WHAMMQ8TF30 809 aa20.64■□□□□ 0.89
LIMD2-209ENST00000580222 CRELD1Q96HD1 420 aa20.64■□□□□ 0.89
LIMD2-209ENST00000580222 MYRFLQ96LU7 910 aa20.64■□□□□ 0.89
LIMD2-209ENST00000580222 CCDC86Q9H6F5 360 aaKnown RBP20.64■□□□□ 0.89
LIMD2-209ENST00000580222 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.64■□□□□ 0.89
LIMD2-209ENST00000580222 PTPRDP23468 1912 aa20.63■□□□□ 0.89
LIMD2-209ENST00000580222 A0A0B4J269 797 aa20.63■□□□□ 0.89
LIMD2-209ENST00000580222 SCAMP3O14828 347 aaKnown RBP20.63■□□□□ 0.89
LIMD2-209ENST00000580222 TGFB1I1O43294 461 aa20.63■□□□□ 0.89
LIMD2-209ENST00000580222 ALDH1A2O94788 518 aa20.63■□□□□ 0.89
LIMD2-209ENST00000580222 SERPINF2P08697 491 aa20.63■□□□□ 0.89
LIMD2-209ENST00000580222 CD44P16070 742 aaKnown RBP20.63■□□□□ 0.89
LIMD2-209ENST00000580222 PAX3P23760 479 aa20.63■□□□□ 0.89
LIMD2-209ENST00000580222 RDXP35241 583 aaKnown RBP20.63■□□□□ 0.89
LIMD2-209ENST00000580222 ATXN3P54252 364 aaPredicted RBP20.63■□□□□ 0.89
LIMD2-209ENST00000580222 MRPS21P82921 87 aaKnown RBP20.63■□□□□ 0.89
LIMD2-209ENST00000580222 GFPT1Q06210 699 aaPredicted RBP20.63■□□□□ 0.89
LIMD2-209ENST00000580222 TMEM132DQ14C87 1099 aa20.63■□□□□ 0.89
LIMD2-209ENST00000580222 TRIP6Q15654 476 aaKnown RBP20.63■□□□□ 0.89
LIMD2-209ENST00000580222 DUOXA1Q1HG43 343 aa20.63■□□□□ 0.89
LIMD2-209ENST00000580222 C12orf40Q86WS4 652 aa20.63■□□□□ 0.89
LIMD2-209ENST00000580222 DCP1BQ8IZD4 617 aaKnown RBP20.63■□□□□ 0.89
LIMD2-209ENST00000580222 GOLGA5Q8TBA6 731 aa20.63■□□□□ 0.89
LIMD2-209ENST00000580222 ADAMTS14Q8WXS8 1223 aa20.63■□□□□ 0.89
LIMD2-209ENST00000580222 TRMT2BQ96GJ1 504 aaKnown RBP20.63■□□□□ 0.89
LIMD2-209ENST00000580222 TSPAN18Q96SJ8 248 aa20.63■□□□□ 0.89
LIMD2-209ENST00000580222 TSG101Q99816 390 aa20.63■□□□□ 0.89
LIMD2-209ENST00000580222 MSTO1Q9BUK6 570 aa20.63■□□□□ 0.89
LIMD2-209ENST00000580222 KCTD10Q9H3F6 313 aa20.63■□□□□ 0.89
LIMD2-209ENST00000580222 AGPAT3Q9NRZ7 376 aa20.63■□□□□ 0.89
LIMD2-209ENST00000580222 CGNQ9P2M7 1197 aaKnown RBP20.63■□□□□ 0.89
LIMD2-209ENST00000580222 DACH1Q9UI36 760 aa20.63■□□□□ 0.89
LIMD2-209ENST00000580222 CTNND2Q9UQB3 1225 aa20.63■□□□□ 0.89
LIMD2-209ENST00000580222 STYXL1Q9Y6J8 313 aa20.63■□□□□ 0.89
LIMD2-209ENST00000580222 PDXKO00764 312 aa20.62■□□□□ 0.89
LIMD2-209ENST00000580222 CLIC2O15247 247 aa20.62■□□□□ 0.89
LIMD2-209ENST00000580222 CALUO43852 315 aaPredicted RBP20.62■□□□□ 0.89
LIMD2-209ENST00000580222 CYP17A1P05093 508 aa20.62■□□□□ 0.89
LIMD2-209ENST00000580222 FTH1P19P0C7X4 201 aa20.62■□□□□ 0.89
LIMD2-209ENST00000580222 GARTP22102 1010 aa20.62■□□□□ 0.89
LIMD2-209ENST00000580222 KIR2DL1P43626 348 aaPredicted RBP20.62■□□□□ 0.89
LIMD2-209ENST00000580222 SNRPFP62306 86 aaKnown RBP20.62■□□□□ 0.89
LIMD2-209ENST00000580222 STX1AQ16623 288 aa20.62■□□□□ 0.89
LIMD2-209ENST00000580222 DPCR1Q3MIW9 517 aa20.62■□□□□ 0.89
LIMD2-209ENST00000580222 SPDYCQ5MJ68 293 aa20.62■□□□□ 0.89
LIMD2-209ENST00000580222 SLCO6A1Q86UG4 719 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms