RNA–Protein interactions for RNA: ENST00000580104.5

TRAPPC8-207, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 5,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-207ENST00000580104 SNX13Q9Y5W8 968 aa14.08□□□□□ -0.16
TRAPPC8-207ENST00000580104 GAKO14976 1311 aa14.08□□□□□ -0.16
TRAPPC8-207ENST00000580104 C3orf70A6NLC5 250 aaPredicted RBP14.08□□□□□ -0.16
TRAPPC8-207ENST00000580104 EEF2KO00418 725 aaKnown RBP14.08□□□□□ -0.16
TRAPPC8-207ENST00000580104 FKBP6O75344 327 aa14.08□□□□□ -0.16
TRAPPC8-207ENST00000580104 MT-CO1P00395 513 aa14.08□□□□□ -0.16
TRAPPC8-207ENST00000580104 CYP3A4P08684 503 aa14.08□□□□□ -0.16
TRAPPC8-207ENST00000580104 TGM2P21980 687 aa14.08□□□□□ -0.16
TRAPPC8-207ENST00000580104 GLRA2P23416 452 aa14.08□□□□□ -0.16
TRAPPC8-207ENST00000580104 POLNQ7Z5Q5 900 aa14.08□□□□□ -0.16
TRAPPC8-207ENST00000580104 FAM131BQ86XD5 332 aa14.08□□□□□ -0.16
TRAPPC8-207ENST00000580104 POLIQ9UNA4 740 aa14.08□□□□□ -0.16
TRAPPC8-207ENST00000580104 SYCE1LA8MT33 242 aa14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 ZMPSTE24O75844 475 aa14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 MAPTP10636 758 aaKnown RBP14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 ATP6V1C1P21283 382 aa14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 CLCN3P51790 818 aa14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 OCA2Q04671 838 aa14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 CACNB2Q08289 660 aaPredicted RBP14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 PGM5Q15124 567 aa14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 TMTC4Q5T4D3 741 aa14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 ALYREFQ86V81 257 aaKnown RBP14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 SCN4BQ8IWT1 228 aa14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 ZNF280CQ8ND82 737 aa14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 PPP2R3CQ969Q6 453 aa14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 GCNAQ96QF7 691 aa14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 MECRQ9BV79 373 aa14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 PXMP2Q9NR77 195 aa14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 CPSF3Q9UKF6 684 aaKnown RBP14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 VAV3Q9UKW4 847 aa14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 ACTL7BQ9Y614 415 aa14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 ANGPT2O15123 496 aa14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 RAG1P15918 1043 aa14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 MIPP30301 263 aa14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 NAMPTP43490 491 aa14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 PPM1FP49593 454 aaPredicted RBP14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 PDAP1Q13442 181 aaKnown RBP14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 DPYSL3Q14195 570 aa14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 PCSK7Q16549 785 aa14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 RFWD2Q8NHY2 731 aa14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 PDCD6IPQ8WUM4 868 aaKnown RBP14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 OTUD5Q96G74 571 aa14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 FRMD8Q9BZ67 464 aaPredicted RBP14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 LRRC4CQ9HCJ2 640 aa14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 STX18Q9P2W9 335 aaKnown RBP14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 SDR42E2A6NKP2 422 aa14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 CPA3P15088 417 aa14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 RPL22P35268 128 aaKnown RBP14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 SLC1A6P48664 564 aa14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 RIPK1Q13546 671 aa14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 TTLL4Q14679 1199 aa14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 MAPRE2Q15555 327 aa14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 NFIL3Q16649 462 aa14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 MFSD5Q6N075 450 aa14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 IPMKQ8NFU5 416 aa14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 IL31RAQ8NI17 732 aa14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 PLEKHA5Q9HAU0 1116 aa14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 ARL8BQ9NVJ2 186 aa14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 CORO1CQ9ULV4 474 aaPredicted RBP14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 MRC1P22897 1456 aa14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 PTGIRP43119 386 aa14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 ZDHHC24Q6UX98 284 aa14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 SLFN11Q7Z7L1 901 aa14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 APLFQ8IW19 511 aaPredicted RBP14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 CNPY3Q9BT09 278 aa14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 ZNF518BQ9C0D4 1074 aa14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 SIX2Q9NPC8 291 aa14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 NMRK1Q9NWW6 199 aa14.07□□□□□ -0.16
TRAPPC8-207ENST00000580104 M0R2N6 131 aa14.06□□□□□ -0.16
TRAPPC8-207ENST00000580104 CXCL8P10145 99 aa14.06□□□□□ -0.16
TRAPPC8-207ENST00000580104 ETS2P15036 469 aa14.06□□□□□ -0.16
TRAPPC8-207ENST00000580104 MAP4P27816 1152 aaKnown RBP14.06□□□□□ -0.16
TRAPPC8-207ENST00000580104 ABCG1P45844 678 aa14.06□□□□□ -0.16
TRAPPC8-207ENST00000580104 OASLQ15646 514 aaKnown RBP14.06□□□□□ -0.16
TRAPPC8-207ENST00000580104 PIGWQ7Z7B1 504 aa14.06□□□□□ -0.16
TRAPPC8-207ENST00000580104 CYP4X1Q8N118 509 aa14.06□□□□□ -0.16
TRAPPC8-207ENST00000580104 TTC39CQ8N584 583 aa14.06□□□□□ -0.16
TRAPPC8-207ENST00000580104 B4GALNT2Q8NHY0 566 aa14.06□□□□□ -0.16
TRAPPC8-207ENST00000580104 MPP4Q96JB8 637 aa14.06□□□□□ -0.16
TRAPPC8-207ENST00000580104 VCPIP1Q96JH7 1222 aa14.06□□□□□ -0.16
TRAPPC8-207ENST00000580104 VPS33BQ9H267 617 aa14.06□□□□□ -0.16
TRAPPC8-207ENST00000580104 AVILO75366 819 aa14.06□□□□□ -0.16
TRAPPC8-207ENST00000580104 NPTXRO95502 500 aa14.06□□□□□ -0.16
TRAPPC8-207ENST00000580104 LSM8O95777 96 aaKnown RBP14.06□□□□□ -0.16
TRAPPC8-207ENST00000580104 GFAPP14136 432 aa14.06□□□□□ -0.16
TRAPPC8-207ENST00000580104 ITGB5P18084 799 aa14.06□□□□□ -0.16
TRAPPC8-207ENST00000580104 CCNA1P78396 465 aa14.06□□□□□ -0.16
TRAPPC8-207ENST00000580104 PTPN11Q06124 597 aaPredicted RBP14.06□□□□□ -0.16
TRAPPC8-207ENST00000580104 BST1Q10588 318 aa14.06□□□□□ -0.16
TRAPPC8-207ENST00000580104 DCAF12L1Q5VU92 463 aa14.06□□□□□ -0.16
TRAPPC8-207ENST00000580104 BBS5Q8N3I7 341 aa14.06□□□□□ -0.16
TRAPPC8-207ENST00000580104 RDM1Q8NG50 284 aa14.06□□□□□ -0.16
TRAPPC8-207ENST00000580104 SLC7A14Q8TBB6 771 aa14.06□□□□□ -0.16
TRAPPC8-207ENST00000580104 ZNF212Q9UDV6 495 aa14.06□□□□□ -0.16
TRAPPC8-207ENST00000580104 FAM198AQ9UFP1 575 aa14.06□□□□□ -0.16
TRAPPC8-207ENST00000580104 DCDC2Q9UHG0 476 aa14.06□□□□□ -0.16
TRAPPC8-207ENST00000580104 CAMTA1Q9Y6Y1 1673 aa14.06□□□□□ -0.16
TRAPPC8-207ENST00000580104 ALADP13716 330 aa14.06□□□□□ -0.16
TRAPPC8-207ENST00000580104 RBL1P28749 1068 aa14.06□□□□□ -0.16
TRAPPC8-207ENST00000580104 NUMBP49757 651 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms