RNA–Protein interactions for RNA: ENST00000579289.1

SUPT4H1-203, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 3

Gene SUPT4H1, Length 318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-203ENST00000579289 NFE2L3Q9Y4A8 694 aa11.96□□□□□ -0.49
SUPT4H1-203ENST00000579289 PCDHB9Q9Y5E1 797 aa11.96□□□□□ -0.49
SUPT4H1-203ENST00000579289 PCDHB6Q9Y5E3 794 aa11.96□□□□□ -0.49
SUPT4H1-203ENST00000579289 CPQQ9Y646 472 aa11.96□□□□□ -0.49
SUPT4H1-203ENST00000579289 EIF4E1BA6NMX2 242 aaKnown RBP11.95□□□□□ -0.5
SUPT4H1-203ENST00000579289 KCNJ18B7U540 433 aa11.95□□□□□ -0.5
SUPT4H1-203ENST00000579289 PRRT4C9JH25 899 aa11.95□□□□□ -0.5
SUPT4H1-203ENST00000579289 TRIM66O15016 1216 aa11.95□□□□□ -0.5
SUPT4H1-203ENST00000579289 HOXC11O43248 304 aaPredicted RBP11.95□□□□□ -0.5
SUPT4H1-203ENST00000579289 ADH5P11766 374 aa11.95□□□□□ -0.5
SUPT4H1-203ENST00000579289 LMO2P25791 158 aa11.95□□□□□ -0.5
SUPT4H1-203ENST00000579289 WASP42768 502 aa11.95□□□□□ -0.5
SUPT4H1-203ENST00000579289 LIG4P49917 911 aa11.95□□□□□ -0.5
SUPT4H1-203ENST00000579289 SMTNP53814 917 aa11.95□□□□□ -0.5
SUPT4H1-203ENST00000579289 CACNA2D1P54289 1103 aa11.95□□□□□ -0.5
SUPT4H1-203ENST00000579289 POU5F1Q01860 360 aaKnown RBP11.95□□□□□ -0.5
SUPT4H1-203ENST00000579289 KCNB1Q14721 858 aa11.95□□□□□ -0.5
SUPT4H1-203ENST00000579289 SOWAHAQ2M3V2 549 aa11.95□□□□□ -0.5
SUPT4H1-203ENST00000579289 TMEM119Q4V9L6 283 aa11.95□□□□□ -0.5
SUPT4H1-203ENST00000579289 EGFLAMQ63HQ2 1017 aa11.95□□□□□ -0.5
SUPT4H1-203ENST00000579289 LURAP1LQ8IV03 231 aa11.95□□□□□ -0.5
SUPT4H1-203ENST00000579289 ZNF513Q8N8E2 541 aaPredicted RBP11.95□□□□□ -0.5
SUPT4H1-203ENST00000579289 PIP4K2CQ8TBX8 421 aa11.95□□□□□ -0.5
SUPT4H1-203ENST00000579289 STRA6Q9BX79 667 aa11.95□□□□□ -0.5
SUPT4H1-203ENST00000579289 ZDHHC5Q9C0B5 715 aa11.95□□□□□ -0.5
SUPT4H1-203ENST00000579289 FAM124BQ9H5Z6 455 aaPredicted RBP11.95□□□□□ -0.5
SUPT4H1-203ENST00000579289 CRTAC1Q9NQ79 661 aa11.95□□□□□ -0.5
SUPT4H1-203ENST00000579289 GDAP2Q9NXN4 497 aa11.95□□□□□ -0.5
SUPT4H1-203ENST00000579289 WSB2Q9NYS7 404 aaPredicted RBP11.95□□□□□ -0.5
SUPT4H1-203ENST00000579289 SIX4Q9UIU6 781 aa11.95□□□□□ -0.5
SUPT4H1-203ENST00000579289 KNL1Q8NG31 2342 aa11.95□□□□□ -0.5
SUPT4H1-203ENST00000579289 CABIN1Q9Y6J0 2220 aa11.94□□□□□ -0.5
SUPT4H1-203ENST00000579289 HNRNPDLO14979 420 aaKnown RBP11.94□□□□□ -0.5
SUPT4H1-203ENST00000579289 CILPO75339 1184 aa11.94□□□□□ -0.5
SUPT4H1-203ENST00000579289 ZNF217O75362 1048 aa11.94□□□□□ -0.5
SUPT4H1-203ENST00000579289 PLA2G4BP0C869 781 aa11.94□□□□□ -0.5
SUPT4H1-203ENST00000579289 C7P10643 843 aa11.94□□□□□ -0.5
SUPT4H1-203ENST00000579289 HOXB2P14652 356 aa11.94□□□□□ -0.5
SUPT4H1-203ENST00000579289 NTSR1P30989 418 aa11.94□□□□□ -0.5
SUPT4H1-203ENST00000579289 ABCG1P45844 678 aa11.94□□□□□ -0.5
SUPT4H1-203ENST00000579289 TRAPPC10P48553 1259 aa11.94□□□□□ -0.5
SUPT4H1-203ENST00000579289 TSPY1Q01534 308 aa11.94□□□□□ -0.5
SUPT4H1-203ENST00000579289 GNL2Q13823 731 aaKnown RBP11.94□□□□□ -0.5
SUPT4H1-203ENST00000579289 HLA-BQ31612 363 aa11.94□□□□□ -0.5
SUPT4H1-203ENST00000579289 METTL3Q86U44 580 aaKnown RBP11.94□□□□□ -0.5
SUPT4H1-203ENST00000579289 TMEM25Q86YD3 366 aa11.94□□□□□ -0.5
SUPT4H1-203ENST00000579289 PGBD3Q8N328 593 aa11.94□□□□□ -0.5
SUPT4H1-203ENST00000579289 PDCD7Q8N8D1 485 aaKnown RBP11.94□□□□□ -0.5
SUPT4H1-203ENST00000579289 NAT16Q8N8M0 369 aa11.94□□□□□ -0.5
SUPT4H1-203ENST00000579289 TERB1Q8NA31 727 aa11.94□□□□□ -0.5
SUPT4H1-203ENST00000579289 REEP2Q9BRK0 252 aa11.94□□□□□ -0.5
SUPT4H1-203ENST00000579289 TM7SF3Q9NS93 570 aa11.94□□□□□ -0.5
SUPT4H1-203ENST00000579289 SMPD4Q9NXE4 827 aa11.94□□□□□ -0.5
SUPT4H1-203ENST00000579289 KCND2Q9NZV8 630 aa11.94□□□□□ -0.5
SUPT4H1-203ENST00000579289 USP36Q9P275 1121 aaKnown RBP11.94□□□□□ -0.5
SUPT4H1-203ENST00000579289 CFAP97Q9P2B7 532 aa11.94□□□□□ -0.5
SUPT4H1-203ENST00000579289 KCNG1Q9UIX4 513 aa11.94□□□□□ -0.5
SUPT4H1-203ENST00000579289 PCDHGB2Q9Y5G2 931 aa11.94□□□□□ -0.5
SUPT4H1-203ENST00000579289 COL5A1P20908 1838 aaPredicted RBP11.93□□□□□ -0.5
SUPT4H1-203ENST00000579289 A0A1B0GTW7 788 aa11.93□□□□□ -0.5
SUPT4H1-203ENST00000579289 WASH3PC4AMC7 463 aa11.93□□□□□ -0.5
SUPT4H1-203ENST00000579289 CISD3P0C7P0 127 aa11.93□□□□□ -0.5
SUPT4H1-203ENST00000579289 PRPHP41219 470 aa11.93□□□□□ -0.5
SUPT4H1-203ENST00000579289 MATR3P43243 847 aaKnown RBP eCLIP11.93□□□□□ -0.5
SUPT4H1-203ENST00000579289 NOP14P78316 857 aaKnown RBP11.93□□□□□ -0.5
SUPT4H1-203ENST00000579289 SV2CQ496J9 727 aa11.93□□□□□ -0.5
SUPT4H1-203ENST00000579289 KRT79Q5XKE5 535 aa11.93□□□□□ -0.5
SUPT4H1-203ENST00000579289 ZNF605Q86T29 641 aa11.93□□□□□ -0.5
SUPT4H1-203ENST00000579289 FSIP1Q8NA03 581 aa11.93□□□□□ -0.5
SUPT4H1-203ENST00000579289 ERLEC1Q96DZ1 483 aa11.93□□□□□ -0.5
SUPT4H1-203ENST00000579289 CEP295NLQ96MC4 621 aa11.93□□□□□ -0.5
SUPT4H1-203ENST00000579289 BACH2Q9BYV9 841 aa11.93□□□□□ -0.5
SUPT4H1-203ENST00000579289 GAREM1Q9H706 876 aa11.93□□□□□ -0.5
SUPT4H1-203ENST00000579289 BLOC1S4Q9NUP1 217 aa11.93□□□□□ -0.5
SUPT4H1-203ENST00000579289 RAD54BQ9Y620 910 aa11.93□□□□□ -0.5
SUPT4H1-203ENST00000579289 STK24Q9Y6E0 443 aa11.93□□□□□ -0.5
SUPT4H1-203ENST00000579289 TMEM131Q92545 1883 aa11.93□□□□□ -0.5
SUPT4H1-203ENST00000579289 KNTC1P50748 2209 aa11.92□□□□□ -0.5
SUPT4H1-203ENST00000579289 E2F8A0AVK6 867 aa11.92□□□□□ -0.5
SUPT4H1-203ENST00000579289 TBC1D3BA6NDS4 549 aa11.92□□□□□ -0.5
SUPT4H1-203ENST00000579289 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.92□□□□□ -0.5
SUPT4H1-203ENST00000579289 E9PAM4 449 aa11.92□□□□□ -0.5
SUPT4H1-203ENST00000579289 TRAK2O60296 914 aa11.92□□□□□ -0.5
SUPT4H1-203ENST00000579289 PPP1R37O75864 691 aa11.92□□□□□ -0.5
SUPT4H1-203ENST00000579289 ADH1CP00326 375 aa11.92□□□□□ -0.5
SUPT4H1-203ENST00000579289 IGLV3-19P01714 112 aa11.92□□□□□ -0.5
SUPT4H1-203ENST00000579289 POLR2BP30876 1174 aaKnown RBP11.92□□□□□ -0.5
SUPT4H1-203ENST00000579289 PGFP49763 221 aa11.92□□□□□ -0.5
SUPT4H1-203ENST00000579289 CLDN6P56747 220 aa11.92□□□□□ -0.5
SUPT4H1-203ENST00000579289 GAD2Q05329 585 aa11.92□□□□□ -0.5
SUPT4H1-203ENST00000579289 ENPP2Q13822 863 aa11.92□□□□□ -0.5
SUPT4H1-203ENST00000579289 VSTM1Q6UX27 236 aa11.92□□□□□ -0.5
SUPT4H1-203ENST00000579289 DENND5BQ6ZUT9 1274 aa11.92□□□□□ -0.5
SUPT4H1-203ENST00000579289 SCN4BQ8IWT1 228 aa11.92□□□□□ -0.5
SUPT4H1-203ENST00000579289 BBS7Q8IWZ6 715 aa11.92□□□□□ -0.5
SUPT4H1-203ENST00000579289 TMEM86AQ8N2M4 240 aa11.92□□□□□ -0.5
SUPT4H1-203ENST00000579289 RBBP8NLQ8NC74 664 aaPredicted RBP11.92□□□□□ -0.5
SUPT4H1-203ENST00000579289 MYLPFQ96A32 169 aa11.92□□□□□ -0.5
SUPT4H1-203ENST00000579289 BICD1Q96G01 975 aa11.92□□□□□ -0.5
SUPT4H1-203ENST00000579289 MKRN2Q9H000 416 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms