RNA–Protein interactions for RNA: ENST00000578987.1

NUP85-209, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-209ENST00000578987 TXLNAP40222 546 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 MAGEA11P43364 429 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 AFMP43652 599 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 MAPK8P45983 427 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 NOVA1P51513 510 aaKnown RBP4.09□□□□□ -1.75
NUP85-209ENST00000578987 KDSRQ06136 332 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 FOXC1Q12948 553 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 STK38Q15208 465 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 CRY1Q16526 586 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 CFAP221Q4G0U5 840 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 FBXO43Q4G163 708 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 USP39Q53GS9 565 aaKnown RBP4.09□□□□□ -1.75
NUP85-209ENST00000578987 LY6G5CQ5SRR4 150 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 SH3PXD2AQ5TCZ1 1133 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 TDRD10Q5VZ19 366 aaKnown RBP4.09□□□□□ -1.75
NUP85-209ENST00000578987 SHC4Q6S5L8 630 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 SCARA5Q6ZMJ2 495 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 C4orf50Q6ZRC1 276 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 CCDC73Q6ZRK6 1079 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 DENND5BQ6ZUT9 1274 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 PAQR9Q6ZVX9 377 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 DPH6Q7L8W6 267 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 LIMS2Q7Z4I7 341 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 ACOT1Q86TX2 421 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 TMEM25Q86YD3 366 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 GRAMD1CQ8IYS0 662 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 NUP93Q8N1F7 819 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 IL17RCQ8NAC3 791 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 TXNDC5Q8NBS9 432 aaKnown RBP4.09□□□□□ -1.75
NUP85-209ENST00000578987 DEFB124Q8NES8 71 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 MDGA1Q8NFP4 955 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 TSTD1Q8NFU3 115 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 OR2I1PQ8NGU4 316 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 MYCBPAPQ8TBZ2 947 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 PLEKHO2Q8TD55 490 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 HMGB4Q8WW32 186 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 MRRFQ96E11 262 aaKnown RBP4.09□□□□□ -1.75
NUP85-209ENST00000578987 FUBP3Q96I24 572 aaKnown RBP eCLIP4.09□□□□□ -1.75
NUP85-209ENST00000578987 SPATA17Q96L03 361 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 FNBP1Q96RU3 617 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 PNKPQ96T60 521 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 MED10Q9BTT4 135 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 ZNF518BQ9C0D4 1074 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 SDCBP2Q9H190 292 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 SLC6A17Q9H1V8 727 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 TMEM206Q9H813 350 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 ABCB6Q9NP58 842 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 SLC39A2Q9NP94 309 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 CD93Q9NPY3 652 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 OLFML3Q9NRN5 406 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 VPS45Q9NRW7 570 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 TRPM5Q9NZQ8 1165 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 KIAA1522Q9P206 1035 aaPredicted RBP4.09□□□□□ -1.75
NUP85-209ENST00000578987 CFAP97Q9P2B7 532 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 EBF1Q9UH73 591 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 MBD1Q9UIS9 605 aaPredicted RBP4.09□□□□□ -1.75
NUP85-209ENST00000578987 ZMYM5Q9UJ78 669 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 NUDT5Q9UKK9 219 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 MMP17Q9ULZ9 603 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 ARHGAP26Q9UNA1 814 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 PCDHGA5Q9Y5G8 931 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 ATXN2Q99700 1313 aaKnown RBP4.09□□□□□ -1.75
NUP85-209ENST00000578987 LAMA1P25391 3075 aa4.09□□□□□ -1.75
NUP85-209ENST00000578987 TPRP12270 2363 aaKnown RBP4.09□□□□□ -1.76
NUP85-209ENST00000578987 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.08□□□□□ -1.76
NUP85-209ENST00000578987 SPAARA0A1B0GVQ0 90 aa4.08□□□□□ -1.76
NUP85-209ENST00000578987 TCRBV21S2A2A0A5A6 115 aa4.08□□□□□ -1.76
NUP85-209ENST00000578987 TBC1D3BA6NDS4 549 aa4.08□□□□□ -1.76
NUP85-209ENST00000578987 SOBPA7XYQ1 873 aa4.08□□□□□ -1.76
NUP85-209ENST00000578987 WASH3PC4AMC7 463 aa4.08□□□□□ -1.76
NUP85-209ENST00000578987 HAX1O00165 279 aa4.08□□□□□ -1.76
NUP85-209ENST00000578987 SPTLC2O15270 562 aa4.08□□□□□ -1.76
NUP85-209ENST00000578987 COCHO43405 550 aa4.08□□□□□ -1.76
NUP85-209ENST00000578987 STX6O43752 255 aa4.08□□□□□ -1.76
NUP85-209ENST00000578987 PLXNA2O75051 1894 aa4.08□□□□□ -1.76
NUP85-209ENST00000578987 ADAM23O75077 832 aa4.08□□□□□ -1.76
NUP85-209ENST00000578987 AKAP3O75969 853 aa4.08□□□□□ -1.76
NUP85-209ENST00000578987 KAT7O95251 611 aa4.08□□□□□ -1.76
NUP85-209ENST00000578987 VNN1O95497 513 aa4.08□□□□□ -1.76
NUP85-209ENST00000578987 NFATC1O95644 943 aa4.08□□□□□ -1.76
NUP85-209ENST00000578987 TBX18O95935 607 aa4.08□□□□□ -1.76
NUP85-209ENST00000578987 OAS1P00973 400 aaKnown RBP4.08□□□□□ -1.76
NUP85-209ENST00000578987 C4BPAP04003 597 aaKnown RBP4.08□□□□□ -1.76
NUP85-209ENST00000578987 HSP90AA1P07900 732 aaKnown RBP4.08□□□□□ -1.76
NUP85-209ENST00000578987 ADH5P11766 374 aa4.08□□□□□ -1.76
NUP85-209ENST00000578987 CCDC130P13994 396 aa4.08□□□□□ -1.76
NUP85-209ENST00000578987 HOXB3P14651 431 aaPredicted RBP4.08□□□□□ -1.76
NUP85-209ENST00000578987 ITPKAP23677 461 aa4.08□□□□□ -1.76
NUP85-209ENST00000578987 YWHAQP27348 245 aa4.08□□□□□ -1.76
NUP85-209ENST00000578987 PTGER3P43115 390 aa4.08□□□□□ -1.76
NUP85-209ENST00000578987 KIR2DL1P43626 348 aaPredicted RBP4.08□□□□□ -1.76
NUP85-209ENST00000578987 MAP3K7CLP57077 242 aa4.08□□□□□ -1.76
NUP85-209ENST00000578987 TNNC1P63316 161 aa4.08□□□□□ -1.76
NUP85-209ENST00000578987 FAM193AP78312 1265 aa4.08□□□□□ -1.76
NUP85-209ENST00000578987 ASIC1P78348 528 aa4.08□□□□□ -1.76
NUP85-209ENST00000578987 DLG4P78352 724 aa4.08□□□□□ -1.76
NUP85-209ENST00000578987 SLC7A9P82251 487 aa4.08□□□□□ -1.76
NUP85-209ENST00000578987 MRPS21P82921 87 aaKnown RBP4.08□□□□□ -1.76
NUP85-209ENST00000578987 CYP24A1Q07973 514 aa4.08□□□□□ -1.76
NUP85-209ENST00000578987 TRPC3Q13507 836 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms