RNA–Protein interactions for RNA: ENST00000578557.1

PPP4R1-210, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-210ENST00000578557 ACBD5Q5T8D3 534 aaPredicted RBP9.06□□□□□ -0.96
PPP4R1-210ENST00000578557 TANGO2Q6ICL3 276 aa9.06□□□□□ -0.96
PPP4R1-210ENST00000578557 PPP1R2P3Q6NXS1 205 aa9.06□□□□□ -0.96
PPP4R1-210ENST00000578557 LCLAT1Q6UWP7 414 aa9.06□□□□□ -0.96
PPP4R1-210ENST00000578557 BEND5Q7L4P6 421 aa9.06□□□□□ -0.96
PPP4R1-210ENST00000578557 CCDC186Q7Z3E2 898 aa9.06□□□□□ -0.96
PPP4R1-210ENST00000578557 PPM1KQ8N3J5 372 aa9.06□□□□□ -0.96
PPP4R1-210ENST00000578557 SLC4A11Q8NBS3 891 aa9.06□□□□□ -0.96
PPP4R1-210ENST00000578557 GPT2Q8TD30 523 aa9.06□□□□□ -0.96
PPP4R1-210ENST00000578557 WHAMMQ8TF30 809 aa9.06□□□□□ -0.96
PPP4R1-210ENST00000578557 IRGQQ8WZA9 623 aa9.06□□□□□ -0.96
PPP4R1-210ENST00000578557 GOLGA1Q92805 767 aa9.06□□□□□ -0.96
PPP4R1-210ENST00000578557 SEMA4DQ92854 862 aa9.06□□□□□ -0.96
PPP4R1-210ENST00000578557 FGF14Q92915 247 aa9.06□□□□□ -0.96
PPP4R1-210ENST00000578557 ATP2A3Q93084 1043 aa9.06□□□□□ -0.96
PPP4R1-210ENST00000578557 IQCDQ96DY2 449 aa9.06□□□□□ -0.96
PPP4R1-210ENST00000578557 TCEAL4Q96EI5 215 aa9.06□□□□□ -0.96
PPP4R1-210ENST00000578557 EEF2KMTQ96G04 330 aa9.06□□□□□ -0.96
PPP4R1-210ENST00000578557 LPIN3Q9BQK8 851 aa9.06□□□□□ -0.96
PPP4R1-210ENST00000578557 SEMA4AQ9H3S1 761 aa9.06□□□□□ -0.96
PPP4R1-210ENST00000578557 MMRN2Q9H8L6 949 aa9.06□□□□□ -0.96
PPP4R1-210ENST00000578557 ZNF334Q9HCZ1 680 aaPredicted RBP9.06□□□□□ -0.96
PPP4R1-210ENST00000578557 PLCB1Q9NQ66 1216 aa9.06□□□□□ -0.96
PPP4R1-210ENST00000578557 ARHGEF3Q9NR81 526 aa9.06□□□□□ -0.96
PPP4R1-210ENST00000578557 APEX2Q9UBZ4 518 aa9.06□□□□□ -0.96
PPP4R1-210ENST00000578557 SIT1Q9Y3P8 196 aa9.06□□□□□ -0.96
PPP4R1-210ENST00000578557 NFE2L3Q9Y4A8 694 aa9.06□□□□□ -0.96
PPP4R1-210ENST00000578557 USP3Q9Y6I4 520 aa9.06□□□□□ -0.96
PPP4R1-210ENST00000578557 MYO9BQ13459 2157 aa9.05□□□□□ -0.96
PPP4R1-210ENST00000578557 PLXNA4Q9HCM2 1894 aa9.05□□□□□ -0.96
PPP4R1-210ENST00000578557 KANSL1LA0AUZ9 987 aa9.05□□□□□ -0.96
PPP4R1-210ENST00000578557 KCNJ18B7U540 433 aa9.05□□□□□ -0.96
PPP4R1-210ENST00000578557 NFATC1O95644 943 aa9.05□□□□□ -0.96
PPP4R1-210ENST00000578557 OLFM2O95897 454 aa9.05□□□□□ -0.96
PPP4R1-210ENST00000578557 CD58P19256 250 aa9.05□□□□□ -0.96
PPP4R1-210ENST00000578557 AVPR2P30518 371 aa9.05□□□□□ -0.96
PPP4R1-210ENST00000578557 ATP5C1P36542 298 aaKnown RBP9.05□□□□□ -0.96
PPP4R1-210ENST00000578557 PLA2G4AP47712 749 aa9.05□□□□□ -0.96
PPP4R1-210ENST00000578557 KIF11P52732 1056 aa9.05□□□□□ -0.96
PPP4R1-210ENST00000578557 SLC5A3P53794 718 aa9.05□□□□□ -0.96
PPP4R1-210ENST00000578557 RAD23BP54727 409 aa9.05□□□□□ -0.96
PPP4R1-210ENST00000578557 ZNF445P59923 1031 aa9.05□□□□□ -0.96
PPP4R1-210ENST00000578557 COPS2P61201 443 aa9.05□□□□□ -0.96
PPP4R1-210ENST00000578557 USP46P62068 366 aa9.05□□□□□ -0.96
PPP4R1-210ENST00000578557 TAF10Q12962 218 aa9.05□□□□□ -0.96
PPP4R1-210ENST00000578557 LRRC32Q14392 662 aa9.05□□□□□ -0.96
PPP4R1-210ENST00000578557 KCNJ12Q14500 433 aa9.05□□□□□ -0.96
PPP4R1-210ENST00000578557 MLF2Q15773 248 aaPredicted RBP9.05□□□□□ -0.96
PPP4R1-210ENST00000578557 DPCR1Q3MIW9 517 aa9.05□□□□□ -0.96
PPP4R1-210ENST00000578557 FILIP1LQ4L180 1135 aa9.05□□□□□ -0.96
PPP4R1-210ENST00000578557 DGKKQ5KSL6 1271 aa9.05□□□□□ -0.96
PPP4R1-210ENST00000578557 PM20D1Q6GTS8 502 aa9.05□□□□□ -0.96
PPP4R1-210ENST00000578557 TRIM65Q6PJ69 517 aa9.05□□□□□ -0.96
PPP4R1-210ENST00000578557 BLOC1S3Q6QNY0 202 aa9.05□□□□□ -0.96
PPP4R1-210ENST00000578557 SCARA5Q6ZMJ2 495 aa9.05□□□□□ -0.96
PPP4R1-210ENST00000578557 PAQR9Q6ZVX9 377 aa9.05□□□□□ -0.96
PPP4R1-210ENST00000578557 CREBRFQ8IUR6 639 aa9.05□□□□□ -0.96
PPP4R1-210ENST00000578557 MAB21L3Q8N8X9 362 aa9.05□□□□□ -0.96
PPP4R1-210ENST00000578557 FBXO32Q969P5 355 aa9.05□□□□□ -0.96
PPP4R1-210ENST00000578557 NOX5Q96PH1 765 aa9.05□□□□□ -0.96
PPP4R1-210ENST00000578557 MED15Q96RN5 788 aa9.05□□□□□ -0.96
PPP4R1-210ENST00000578557 DDX23Q9BUQ8 820 aaKnown RBP9.05□□□□□ -0.96
PPP4R1-210ENST00000578557 DCLK3Q9C098 648 aa9.05□□□□□ -0.96
PPP4R1-210ENST00000578557 ZNF518BQ9C0D4 1074 aa9.05□□□□□ -0.96
PPP4R1-210ENST00000578557 INTS2Q9H0H0 1204 aaKnown RBP9.05□□□□□ -0.96
PPP4R1-210ENST00000578557 SDCBP2Q9H190 292 aa9.05□□□□□ -0.96
PPP4R1-210ENST00000578557 DPEP3Q9H4B8 488 aa9.05□□□□□ -0.96
PPP4R1-210ENST00000578557 UBE2TQ9NPD8 197 aaPredicted RBP9.05□□□□□ -0.96
PPP4R1-210ENST00000578557 CNGB3Q9NQW8 809 aa9.05□□□□□ -0.96
PPP4R1-210ENST00000578557 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.05□□□□□ -0.962e-6■■■■■ 96.1
PPP4R1-210ENST00000578557 GCNT4Q9P109 453 aa9.05□□□□□ -0.96
PPP4R1-210ENST00000578557 CEP83Q9Y592 693 aa9.05□□□□□ -0.96
PPP4R1-210ENST00000578557 PCDHB4Q9Y5E5 795 aa9.05□□□□□ -0.96
PPP4R1-210ENST00000578557 SPTBN5Q9NRC6 3674 aaKnown RBP9.04□□□□□ -0.96
PPP4R1-210ENST00000578557 BECN2A8MW95 431 aa9.04□□□□□ -0.96
PPP4R1-210ENST00000578557 ATG13O75143 517 aa9.04□□□□□ -0.96
PPP4R1-210ENST00000578557 OAS1P00973 400 aaKnown RBP9.04□□□□□ -0.96
PPP4R1-210ENST00000578557 CKMP06732 381 aa9.04□□□□□ -0.96
PPP4R1-210ENST00000578557 ASGR2P07307 311 aa9.04□□□□□ -0.96
PPP4R1-210ENST00000578557 ACO1P21399 889 aaKnown RBP9.04□□□□□ -0.96
PPP4R1-210ENST00000578557 SP100P23497 879 aaPredicted RBP9.04□□□□□ -0.96
PPP4R1-210ENST00000578557 FCARP24071 287 aa9.04□□□□□ -0.96
PPP4R1-210ENST00000578557 GDI1P31150 447 aa9.04□□□□□ -0.96
PPP4R1-210ENST00000578557 EIF2DP41214 584 aaKnown RBP9.04□□□□□ -0.96
PPP4R1-210ENST00000578557 NRLP54845 237 aa9.04□□□□□ -0.96
PPP4R1-210ENST00000578557 MAP3K7CLP57077 242 aa9.04□□□□□ -0.96
PPP4R1-210ENST00000578557 ITPRIPL2Q3MIP1 535 aa9.04□□□□□ -0.96
PPP4R1-210ENST00000578557 RAB41Q5JT25 222 aa9.04□□□□□ -0.96
PPP4R1-210ENST00000578557 PPP1R26Q5T8A7 1209 aaPredicted RBP9.04□□□□□ -0.96
PPP4R1-210ENST00000578557 CDKAL1Q5VV42 579 aa9.04□□□□□ -0.96
PPP4R1-210ENST00000578557 SPOPLQ6IQ16 392 aa9.04□□□□□ -0.96
PPP4R1-210ENST00000578557 TMEM270Q6UE05 265 aa9.04□□□□□ -0.96
PPP4R1-210ENST00000578557 VITQ6UXI7 678 aa9.04□□□□□ -0.96
PPP4R1-210ENST00000578557 CLEC20AQ6ZU45 233 aa9.04□□□□□ -0.96
PPP4R1-210ENST00000578557 TMEM150AQ86TG1 271 aa9.04□□□□□ -0.96
PPP4R1-210ENST00000578557 ZNF677Q86XU0 584 aa9.04□□□□□ -0.96
PPP4R1-210ENST00000578557 IRF2BP1Q8IU81 584 aa9.04□□□□□ -0.96
PPP4R1-210ENST00000578557 ZDHHC17Q8IUH5 632 aa9.04□□□□□ -0.96
PPP4R1-210ENST00000578557 SIX5Q8N196 739 aa9.04□□□□□ -0.96
PPP4R1-210ENST00000578557 CPA6Q8N4T0 437 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms