RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 AIF1P55008 147 aa11.63□□□□□ -0.55
SKA2-204ENST00000578519 TSPY1Q01534 308 aa11.63□□□□□ -0.55
SKA2-204ENST00000578519 SOX4Q06945 474 aaPredicted RBP11.63□□□□□ -0.55
SKA2-204ENST00000578519 TRADDQ15628 312 aa11.63□□□□□ -0.55
SKA2-204ENST00000578519 CCDC14Q49A88 953 aa11.63□□□□□ -0.55
SKA2-204ENST00000578519 ATP13A4Q4VNC1 1196 aa11.63□□□□□ -0.55
SKA2-204ENST00000578519 ERMARDQ5T6L9 678 aa11.63□□□□□ -0.55
SKA2-204ENST00000578519 IZUMO3Q5VZ72 239 aa11.63□□□□□ -0.55
SKA2-204ENST00000578519 WSCD1Q658N2 575 aa11.63□□□□□ -0.55
SKA2-204ENST00000578519 ZDHHC24Q6UX98 284 aa11.63□□□□□ -0.55
SKA2-204ENST00000578519 SLC24A5Q71RS6 500 aa11.63□□□□□ -0.55
SKA2-204ENST00000578519 ECHDC2Q86YB7 292 aa11.63□□□□□ -0.55
SKA2-204ENST00000578519 SCUBE3Q8IX30 993 aa11.63□□□□□ -0.55
SKA2-204ENST00000578519 ZDHHC14Q8IZN3 488 aa11.63□□□□□ -0.55
SKA2-204ENST00000578519 ALLCQ8N6M5 410 aa11.63□□□□□ -0.55
SKA2-204ENST00000578519 SLC43A3Q8NBI5 491 aa11.63□□□□□ -0.55
SKA2-204ENST00000578519 FAM172AQ8WUF8 416 aa11.63□□□□□ -0.55
SKA2-204ENST00000578519 P3H4Q92791 437 aa11.63□□□□□ -0.55
SKA2-204ENST00000578519 TTC25Q96NG3 672 aa11.63□□□□□ -0.55
SKA2-204ENST00000578519 FAM193BQ96PV7 902 aaPredicted RBP11.63□□□□□ -0.55
SKA2-204ENST00000578519 ACBD6Q9BR61 282 aa11.63□□□□□ -0.55
SKA2-204ENST00000578519 TMEM109Q9BVC6 243 aa11.63□□□□□ -0.55
SKA2-204ENST00000578519 GOLGA2P5Q9HBQ8 144 aa11.63□□□□□ -0.55
SKA2-204ENST00000578519 TMBIM4Q9HC24 238 aa11.63□□□□□ -0.55
SKA2-204ENST00000578519 PCDH9Q9HC56 1237 aa11.63□□□□□ -0.55
SKA2-204ENST00000578519 NGRNQ9NPE2 291 aaKnown RBP11.63□□□□□ -0.55
SKA2-204ENST00000578519 RGS18Q9NS28 235 aa11.63□□□□□ -0.55
SKA2-204ENST00000578519 TPX2Q9ULW0 747 aaKnown RBP11.63□□□□□ -0.55
SKA2-204ENST00000578519 DOCK3Q8IZD9 2030 aa11.63□□□□□ -0.55
SKA2-204ENST00000578519 SCN10AQ9Y5Y9 1956 aa11.63□□□□□ -0.55
SKA2-204ENST00000578519 DNALI1O14645 258 aaPredicted RBP11.62□□□□□ -0.55
SKA2-204ENST00000578519 APOL1O14791 398 aa11.62□□□□□ -0.55
SKA2-204ENST00000578519 CAPN9O14815 690 aa11.62□□□□□ -0.55
SKA2-204ENST00000578519 PAPSS1O43252 624 aaPredicted RBP11.62□□□□□ -0.55
SKA2-204ENST00000578519 HOXA2O43364 376 aa11.62□□□□□ -0.55
SKA2-204ENST00000578519 DAB1O75553 588 aa11.62□□□□□ -0.55
SKA2-204ENST00000578519 B3GAT3O94766 335 aa11.62□□□□□ -0.55
SKA2-204ENST00000578519 ENDOD1O94919 500 aa11.62□□□□□ -0.55
SKA2-204ENST00000578519 F9P00740 461 aa11.62□□□□□ -0.55
SKA2-204ENST00000578519 CYP11A1P05108 521 aa11.62□□□□□ -0.55
SKA2-204ENST00000578519 INHAP05111 366 aa11.62□□□□□ -0.55
SKA2-204ENST00000578519 CKBP12277 381 aa11.62□□□□□ -0.55
SKA2-204ENST00000578519 CCDC130P13994 396 aa11.62□□□□□ -0.55
SKA2-204ENST00000578519 ARL4AP40617 200 aa11.62□□□□□ -0.55
SKA2-204ENST00000578519 MATKP42679 507 aa11.62□□□□□ -0.55
SKA2-204ENST00000578519 ARSEP51690 589 aa11.62□□□□□ -0.55
SKA2-204ENST00000578519 CLCNKBP51801 687 aa11.62□□□□□ -0.55
SKA2-204ENST00000578519 ITGA8P53708 1063 aa11.62□□□□□ -0.55
SKA2-204ENST00000578519 EIF3EP60228 445 aaKnown RBP11.62□□□□□ -0.55
SKA2-204ENST00000578519 YWHAZP63104 245 aaKnown RBP11.62□□□□□ -0.55
SKA2-204ENST00000578519 MRPS5P82675 430 aaKnown RBP11.62□□□□□ -0.55
SKA2-204ENST00000578519 MORF4L2Q15014 288 aa11.62□□□□□ -0.55
SKA2-204ENST00000578519 UPP1Q16831 310 aa11.62□□□□□ -0.55
SKA2-204ENST00000578519 TRIM71Q2Q1W2 868 aaKnown RBP11.62□□□□□ -0.55
SKA2-204ENST00000578519 KRT71Q3SY84 523 aa11.62□□□□□ -0.55
SKA2-204ENST00000578519 MDH1BQ5I0G3 518 aa11.62□□□□□ -0.55
SKA2-204ENST00000578519 ZNF618Q5T7W0 954 aa11.62□□□□□ -0.55
SKA2-204ENST00000578519 PPP1R21Q6ZMI0 780 aa11.62□□□□□ -0.55
SKA2-204ENST00000578519 C4orf50Q6ZRC1 276 aa11.62□□□□□ -0.55
SKA2-204ENST00000578519 PDZD4Q76G19 769 aaPredicted RBP11.62□□□□□ -0.55
SKA2-204ENST00000578519 SLC35B2Q8TB61 432 aa11.62□□□□□ -0.55
SKA2-204ENST00000578519 MYCBPAPQ8TBZ2 947 aa11.62□□□□□ -0.55
SKA2-204ENST00000578519 ATG4AQ8WYN0 398 aa11.62□□□□□ -0.55
SKA2-204ENST00000578519 IRGQQ8WZA9 623 aa11.62□□□□□ -0.55
SKA2-204ENST00000578519 SMARCD1Q96GM5 515 aa11.62□□□□□ -0.55
SKA2-204ENST00000578519 ZFP42Q96MM3 310 aa11.62□□□□□ -0.55
SKA2-204ENST00000578519 RNF157Q96PX1 679 aa11.62□□□□□ -0.55
SKA2-204ENST00000578519 ZNF670Q9BS34 389 aa11.62□□□□□ -0.55
SKA2-204ENST00000578519 FRMD8Q9BZ67 464 aaPredicted RBP11.62□□□□□ -0.55
SKA2-204ENST00000578519 TXLNGYQ9BZA5 131 aa11.62□□□□□ -0.55
SKA2-204ENST00000578519 PHACTR1Q9C0D0 580 aa11.62□□□□□ -0.55
SKA2-204ENST00000578519 NEUROG2Q9H2A3 272 aa11.62□□□□□ -0.55
SKA2-204ENST00000578519 DPEP3Q9H4B8 488 aa11.62□□□□□ -0.55
SKA2-204ENST00000578519 AGO3Q9H9G7 860 aaKnown RBP11.62□□□□□ -0.55
SKA2-204ENST00000578519 PPCSQ9HAB8 311 aa11.62□□□□□ -0.55
SKA2-204ENST00000578519 CNGB3Q9NQW8 809 aa11.62□□□□□ -0.55
SKA2-204ENST00000578519 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.62□□□□□ -0.55
SKA2-204ENST00000578519 RCOR3Q9P2K3 495 aaPredicted RBP11.62□□□□□ -0.55
SKA2-204ENST00000578519 TJP2Q9UDY2 1190 aa11.62□□□□□ -0.55
SKA2-204ENST00000578519 PHF24Q9UPV7 400 aa11.62□□□□□ -0.55
SKA2-204ENST00000578519 GRIN2DO15399 1336 aa11.61□□□□□ -0.55
SKA2-204ENST00000578519 C3orf70A6NLC5 250 aaPredicted RBP11.61□□□□□ -0.55
SKA2-204ENST00000578519 EIF3HO15372 352 aaKnown RBP eCLIP11.61□□□□□ -0.55
SKA2-204ENST00000578519 AP1G2O75843 785 aa11.61□□□□□ -0.55
SKA2-204ENST00000578519 IL1R2P27930 398 aa11.61□□□□□ -0.55
SKA2-204ENST00000578519 FLT3P36888 993 aa11.61□□□□□ -0.55
SKA2-204ENST00000578519 NR2C2P49116 596 aa11.61□□□□□ -0.55
SKA2-204ENST00000578519 LMAN1P49257 510 aa11.61□□□□□ -0.55
SKA2-204ENST00000578519 BCAR1P56945 870 aa11.61□□□□□ -0.55
SKA2-204ENST00000578519 ATP11AP98196 1134 aa11.61□□□□□ -0.55
SKA2-204ENST00000578519 OTUD4Q01804 1114 aaKnown RBP11.61□□□□□ -0.55
SKA2-204ENST00000578519 ROR1Q01973 937 aa11.61□□□□□ -0.55
SKA2-204ENST00000578519 LLGL1Q15334 1064 aa11.61□□□□□ -0.55
SKA2-204ENST00000578519 CDO1Q16878 200 aa11.61□□□□□ -0.55
SKA2-204ENST00000578519 SMTNL2Q2TAL5 461 aa11.61□□□□□ -0.55
SKA2-204ENST00000578519 ARL13BQ3SXY8 428 aa11.61□□□□□ -0.55
SKA2-204ENST00000578519 SLC25A52Q3SY17 297 aa11.61□□□□□ -0.55
SKA2-204ENST00000578519 DAB2IPQ5VWQ8 1189 aa11.61□□□□□ -0.55
SKA2-204ENST00000578519 DARS2Q6PI48 645 aaKnown RBP11.61□□□□□ -0.55
SKA2-204ENST00000578519 CENPUQ71F23 418 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms