RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	ACOT1	Q86TX2	421 aa		4.74	□□□□□ -1.65
PPP4R1-209	ENST00000578329	FAM35A	Q86V20	835 aa		4.74	□□□□□ -1.65
PPP4R1-209	ENST00000578329	TMEM25	Q86YD3	366 aa		4.74	□□□□□ -1.65
PPP4R1-209	ENST00000578329	SPATA2L	Q8IUW3	424 aa	Predicted RBP	4.74	□□□□□ -1.65
PPP4R1-209	ENST00000578329	SLC9A9	Q8IVB4	645 aa		4.74	□□□□□ -1.65
PPP4R1-209	ENST00000578329	BBS7	Q8IWZ6	715 aa		4.74	□□□□□ -1.65
PPP4R1-209	ENST00000578329	CCDC65	Q8IXS2	484 aa		4.74	□□□□□ -1.65
PPP4R1-209	ENST00000578329	YAF2	Q8IY57	180 aa		4.74	□□□□□ -1.65
PPP4R1-209	ENST00000578329	SYCP3	Q8IZU3	236 aa		4.74	□□□□□ -1.65
PPP4R1-209	ENST00000578329	CRYBG2	Q8N1P7	616 aa		4.74	□□□□□ -1.65
PPP4R1-209	ENST00000578329	CCDC33	Q8N5R6	958 aa		4.74	□□□□□ -1.65
PPP4R1-209	ENST00000578329	ALLC	Q8N6M5	410 aa		4.74	□□□□□ -1.65
PPP4R1-209	ENST00000578329	UBR7	Q8N806	425 aa		4.74	□□□□□ -1.65
PPP4R1-209	ENST00000578329	XXYLT1	Q8NBI6	393 aa		4.74	□□□□□ -1.65
PPP4R1-209	ENST00000578329	B3GALNT2	Q8NCR0	500 aa		4.74	□□□□□ -1.65
PPP4R1-209	ENST00000578329	TAS1R2	Q8TE23	839 aa		4.74	□□□□□ -1.65
PPP4R1-209	ENST00000578329	RLN3	Q8WXF3	142 aa		4.74	□□□□□ -1.65
PPP4R1-209	ENST00000578329	MRPS31	Q92665	395 aa	Known RBP	4.74	□□□□□ -1.65
PPP4R1-209	ENST00000578329	CD101	Q93033	1021 aa		4.74	□□□□□ -1.65
PPP4R1-209	ENST00000578329	ARID3A	Q99856	593 aa		4.74	□□□□□ -1.65
PPP4R1-209	ENST00000578329	RTKN	Q9BST9	563 aa		4.74	□□□□□ -1.65
PPP4R1-209	ENST00000578329	KLF16	Q9BXK1	252 aa	Predicted RBP	4.74	□□□□□ -1.65
PPP4R1-209	ENST00000578329	TPSD1	Q9BZJ3	242 aa		4.74	□□□□□ -1.65
PPP4R1-209	ENST00000578329	ELOVL4	Q9GZR5	314 aa		4.74	□□□□□ -1.65
PPP4R1-209	ENST00000578329	SLC6A17	Q9H1V8	727 aa		4.74	□□□□□ -1.65
PPP4R1-209	ENST00000578329	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	4.74	□□□□□ -1.65
PPP4R1-209	ENST00000578329	KIF9	Q9HAQ2	790 aa		4.74	□□□□□ -1.65
PPP4R1-209	ENST00000578329	TRPC7	Q9HCX4	862 aa		4.74	□□□□□ -1.65
PPP4R1-209	ENST00000578329	FSCN3	Q9NQT6	498 aa		4.74	□□□□□ -1.65
PPP4R1-209	ENST00000578329	GMIP	Q9P107	970 aa		4.74	□□□□□ -1.65
PPP4R1-209	ENST00000578329	CFAP97	Q9P2B7	532 aa		4.74	□□□□□ -1.65
PPP4R1-209	ENST00000578329	MAGEC2	Q9UBF1	373 aa	Predicted RBP	4.74	□□□□□ -1.65
PPP4R1-209	ENST00000578329	CHORDC1	Q9UHD1	332 aa	Predicted RBP	4.74	□□□□□ -1.65
PPP4R1-209	ENST00000578329	USP18	Q9UMW8	372 aa		4.74	□□□□□ -1.65
PPP4R1-209	ENST00000578329	EXOC7	Q9UPT5	735 aa		4.74	□□□□□ -1.65
PPP4R1-209	ENST00000578329	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	TRAV19	A0A0A6YYK7	116 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329		A0A1B0GVL5	298 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	PVALEF	A0A1B0GWK0	134 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	PRR5-ARHGAP8	B1AHC4	643 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	C10orf142	B7Z368	130 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	TULP2	O00295	520 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	DPYSL4	O14531	572 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	KIAA0391	O15091	583 aa	Known RBP	4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	CALCA	P01258	141 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	CKM	P06732	381 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	FAM163B	P0C2L3	166 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	TMEM191B	P0C7N4	346 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	SLFN14	P0C7P3	912 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	TRIM49	P0CI25	452 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	TRIM49C	P0CI26	452 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	PFKFB1	P16118	471 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	GABRG2	P18507	467 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	SPINK2	P20155	84 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	DRD1	P21728	446 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	PCSK1	P29120	753 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	ABCD1	P33897	745 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	MPL	P40238	635 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	P2RY2	P41231	377 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	NDUFA8	P51970	172 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	NDST1	P52848	882 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	SLC5A3	P53794	718 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	PMS1	P54277	932 aa	Known RBP	4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	NRL	P54845	237 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	SEC13	P55735	322 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	FAM193A	P78312	1265 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	IRX4	P78413	519 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	ARHGAP8	P85298	464 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	MYL7	Q01449	175 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	BNC1	Q01954	994 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	CYP27A1	Q02318	531 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	INCA1	Q0VD86	236 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	NCOA4	Q13772	614 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	CRY1	Q16526	586 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	ARTN	Q5T4W7	220 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	STPG1	Q5TH74	334 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	PEAR1	Q5VY43	1037 aa	Predicted RBP	4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	TMEM215	Q68D42	235 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	C1orf228	Q6PIY5	440 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	SCARA5	Q6ZMJ2	495 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	CLEC20A	Q6ZU45	233 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	ZC3H3	Q8IXZ2	948 aa	Known RBP	4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	SMYD4	Q8IYR2	804 aa	Predicted RBP	4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	CAMKK1	Q8N5S9	505 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	OR2I1P	Q8NGU4	316 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	OR6B3	Q8NGW1	331 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	RASSF8	Q8NHQ8	419 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	SLC2A14	Q8TDB8	520 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	NETO1	Q8TDF5	533 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	NOC3L	Q8WTT2	800 aa	Known RBP	4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	CACTIN	Q8WUQ7	758 aa	Known RBP	4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	NDRG1	Q92597	394 aa	Known RBP	4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	MYEOV	Q96EZ4	313 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	EEF2KMT	Q96G04	330 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	ANKRD36BP1	Q96IX9	119 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	LOXL4	Q96JB6	756 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	CEP295NL	Q96MC4	621 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	DUSP9	Q99956	384 aa	Known RBP	4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	HINFP	Q9BQA5	517 aa		4.73	□□□□□ -1.65
PPP4R1-209	ENST00000578329	LSM14B	Q9BX40	385 aa	Known RBP	4.73	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 46 ms