RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 PAQR9Q6ZVX9 377 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 LRRTM3Q86VH5 581 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 CEP57Q86XR8 500 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 DCP1BQ8IZD4 617 aaKnown RBP8.47□□□□□ -1.05
COPS3-215ENST00000578317 FUKQ8N0W3 1084 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 VPS52Q8N1B4 723 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 TTC16Q8NEE8 873 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 OR10T2Q8NGX3 314 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 SPPL3Q8TCT6 385 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 SLC20A1Q8WUM9 679 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 SREK1Q8WXA9 508 aaKnown RBP8.47□□□□□ -1.05
COPS3-215ENST00000578317 FUBP3Q96I24 572 aaKnown RBP eCLIP8.47□□□□□ -1.05
COPS3-215ENST00000578317 VCPIP1Q96JH7 1222 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 ZNF830Q96NB3 372 aaPredicted RBP8.47□□□□□ -1.05
COPS3-215ENST00000578317 PCDHB18PQ96TA0 734 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 SYT15Q9BQS2 421 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 C11orf84Q9BUA3 381 aaPredicted RBP8.47□□□□□ -1.05
COPS3-215ENST00000578317 PBX4Q9BYU1 374 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 UBXN6Q9BZV1 441 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 ISCUQ9H1K1 167 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 DPEP3Q9H4B8 488 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 DEF6Q9H4E7 631 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 CRTAC1Q9NQ79 661 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 KCND1Q9NSA2 647 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 FNIP2Q9P278 1114 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 VTI1BQ9UEU0 232 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 MSRAQ9UJ68 235 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 GTF3C4Q9UKN8 822 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 MAFFQ9ULX9 164 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.47□□□□□ -1.05
COPS3-215ENST00000578317 CHD7Q9P2D1 2997 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 SZT2Q5T011 3432 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 ATP2C2O75185 946 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 RTN2O75298 545 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 IPO7O95373 1038 aaKnown RBP8.47□□□□□ -1.05
COPS3-215ENST00000578317 CA3P07451 260 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 SETSIPP0DME0 302 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 MYOGP15173 224 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 CD19P15391 556 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 GPD2P43304 727 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 PLA2G4AP47712 749 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 RPL34P49207 117 aaKnown RBP8.47□□□□□ -1.05
COPS3-215ENST00000578317 GLUD2P49448 558 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 RNF144AP50876 292 aaPredicted RBP8.47□□□□□ -1.05
COPS3-215ENST00000578317 CREMQ03060 361 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 SPA17Q15506 151 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 CLEC16AQ2KHT3 1053 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 CFAP221Q4G0U5 840 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 CTXN3Q4LDR2 81 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 PDE12Q6L8Q7 609 aaKnown RBP8.47□□□□□ -1.05
COPS3-215ENST00000578317 C4orf50Q6ZRC1 276 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 ZNF662Q6ZS27 426 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 WDTC1Q8N5D0 677 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 TMEM35BQ8NCS4 154 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 GPR152Q8TDT2 470 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 FBF1Q8TES7 1133 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 C2orf15Q8WU43 125 aaKnown RBP8.47□□□□□ -1.05
COPS3-215ENST00000578317 SLC35F5Q8WV83 523 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 PCED1BQ96HM7 432 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 CLSTN3Q9BQT9 956 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 C17orf80Q9BSJ5 609 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.47□□□□□ -1.05
COPS3-215ENST00000578317 DUSP16Q9BY84 665 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 GRIP2Q9C0E4 1043 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 ZBP1Q9H171 429 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 CSNK1G1Q9HCP0 422 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 ABCB6Q9NP58 842 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 NGRNQ9NPE2 291 aaKnown RBP8.47□□□□□ -1.05
COPS3-215ENST00000578317 MRPL17Q9NRX2 175 aaKnown RBP8.47□□□□□ -1.05
COPS3-215ENST00000578317 HSFX1Q9UBD0 423 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 TSPAN16Q9UKR8 245 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 INTUQ9ULD6 942 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 YBX2Q9Y2T7 364 aaKnown RBP8.47□□□□□ -1.05
COPS3-215ENST00000578317 CEP83Q9Y592 693 aa8.47□□□□□ -1.05
COPS3-215ENST00000578317 ATP8B3O60423 1300 aa8.46□□□□□ -1.05
COPS3-215ENST00000578317 H3BNC9 293 aa8.46□□□□□ -1.06
COPS3-215ENST00000578317 ZNF263O14978 683 aa8.46□□□□□ -1.06
COPS3-215ENST00000578317 HCRTO43612 131 aa8.46□□□□□ -1.06
COPS3-215ENST00000578317 MICAL2O94851 1124 aa8.46□□□□□ -1.06
COPS3-215ENST00000578317 ABLIM3O94929 683 aa8.46□□□□□ -1.06
COPS3-215ENST00000578317 URODP06132 367 aa8.46□□□□□ -1.06
COPS3-215ENST00000578317 ACAT1P24752 427 aaKnown RBP8.46□□□□□ -1.06
COPS3-215ENST00000578317 CTNNB1P35222 781 aa8.46□□□□□ -1.06
COPS3-215ENST00000578317 MAGEA11P43364 429 aa8.46□□□□□ -1.06
COPS3-215ENST00000578317 SLC8A3P57103 927 aa8.46□□□□□ -1.06
COPS3-215ENST00000578317 NOMO3P69849 1222 aa8.46□□□□□ -1.06
COPS3-215ENST00000578317 GFPT1Q06210 699 aaPredicted RBP8.46□□□□□ -1.06
COPS3-215ENST00000578317 ORC1Q13415 861 aa8.46□□□□□ -1.06
COPS3-215ENST00000578317 RAB33AQ14088 237 aa8.46□□□□□ -1.06
COPS3-215ENST00000578317 MTF1Q14872 753 aa8.46□□□□□ -1.06
COPS3-215ENST00000578317 LRIT3Q3SXY7 679 aa8.46□□□□□ -1.06
COPS3-215ENST00000578317 CCDC122Q5T0U0 273 aa8.46□□□□□ -1.06
COPS3-215ENST00000578317 TAF3Q5VWG9 929 aa8.46□□□□□ -1.06
COPS3-215ENST00000578317 TPGS2Q68CL5 300 aa8.46□□□□□ -1.06
COPS3-215ENST00000578317 ACAD10Q6JQN1 1059 aa8.46□□□□□ -1.06
COPS3-215ENST00000578317 VSTM1Q6UX27 236 aa8.46□□□□□ -1.06
COPS3-215ENST00000578317 RSPO2Q6UXX9 243 aaPredicted RBP8.46□□□□□ -1.06
COPS3-215ENST00000578317 PHF13Q86YI8 300 aaPredicted RBP8.46□□□□□ -1.06
COPS3-215ENST00000578317 MRPL43Q8N983 215 aaKnown RBP8.46□□□□□ -1.06
COPS3-215ENST00000578317 ZNF461Q8TAF7 563 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms