RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 ZSCAN32Q9NX65 697 aa24.32■■□□□ 1.48
VAPA-205ENST00000578314 PCDHGA2Q9Y5H1 932 aa24.32■■□□□ 1.48
VAPA-205ENST00000578314 WNT6Q9Y6F9 365 aa24.32■■□□□ 1.48
VAPA-205ENST00000578314 FRYLO94915 3013 aa24.32■■□□□ 1.48
VAPA-205ENST00000578314 FAM200BP0CF97 657 aa24.31■■□□□ 1.48
VAPA-205ENST00000578314 TDGF1P13385 188 aa24.31■■□□□ 1.48
VAPA-205ENST00000578314 IFNAR2P48551 515 aa24.31■■□□□ 1.48
VAPA-205ENST00000578314 UBE2HP62256 183 aa24.31■■□□□ 1.48
VAPA-205ENST00000578314 TMEM196Q5HYL7 178 aa24.31■■□□□ 1.48
VAPA-205ENST00000578314 TTI2Q6NXR4 508 aa24.31■■□□□ 1.48
VAPA-205ENST00000578314 CPA6Q8N4T0 437 aa24.31■■□□□ 1.48
VAPA-205ENST00000578314 ZBTB44Q8NCP5 570 aa24.31■■□□□ 1.48
VAPA-205ENST00000578314 TTC16Q8NEE8 873 aa24.31■■□□□ 1.48
VAPA-205ENST00000578314 TATDN2Q93075 761 aa24.31■■□□□ 1.48
VAPA-205ENST00000578314 LINC00597Q9H2U6 94 aa24.31■■□□□ 1.48
VAPA-205ENST00000578314 FBXO44Q9H4M3 255 aa24.31■■□□□ 1.48
VAPA-205ENST00000578314 CPQQ9Y646 472 aa24.31■■□□□ 1.48
VAPA-205ENST00000578314 GVINP1Q7Z2Y8 2422 aa24.31■■□□□ 1.48
VAPA-205ENST00000578314 KIF26AQ9ULI4 1882 aaPredicted RBP24.3■■□□□ 1.48
VAPA-205ENST00000578314 ADORA2BP29275 332 aa24.3■■□□□ 1.48
VAPA-205ENST00000578314 GJA4P35212 333 aa24.3■■□□□ 1.48
VAPA-205ENST00000578314 CXCL12P48061 93 aa24.3■■□□□ 1.48
VAPA-205ENST00000578314 TUBP50607 506 aa24.3■■□□□ 1.48
VAPA-205ENST00000578314 HECTD3Q5T447 861 aa24.3■■□□□ 1.48
VAPA-205ENST00000578314 TSSK4Q6SA08 328 aa24.3■■□□□ 1.48
VAPA-205ENST00000578314 CLEC20AQ6ZU45 233 aa24.3■■□□□ 1.48
VAPA-205ENST00000578314 PNPLA8Q9NP80 782 aa24.3■■□□□ 1.48
VAPA-205ENST00000578314 CISHQ9NSE2 258 aa24.3■■□□□ 1.48
VAPA-205ENST00000578314 HHLA1C9JL84 531 aa24.29■■□□□ 1.48
VAPA-205ENST00000578314 PMM2O15305 246 aa24.29■■□□□ 1.48
VAPA-205ENST00000578314 PAPSS2O95340 614 aaPredicted RBP24.29■■□□□ 1.48
VAPA-205ENST00000578314 GRSF1Q12849 480 aaKnown RBP eCLIP24.29■■□□□ 1.48
VAPA-205ENST00000578314 PPP2R5DQ14738 602 aa24.29■■□□□ 1.48
VAPA-205ENST00000578314 KLHL10Q6JEL2 608 aa24.29■■□□□ 1.48
VAPA-205ENST00000578314 FSTL4Q6MZW2 842 aa24.29■■□□□ 1.48
VAPA-205ENST00000578314 Q6ZS52 159 aa24.29■■□□□ 1.48
VAPA-205ENST00000578314 NELFBQ8WX92 580 aa24.29■■□□□ 1.48
VAPA-205ENST00000578314 ATRIPQ8WXE1 791 aa24.29■■□□□ 1.48
VAPA-205ENST00000578314 GMIPQ9P107 970 aa24.29■■□□□ 1.48
VAPA-205ENST00000578314 SPTBN4Q9H254 2564 aa24.29■■□□□ 1.48
VAPA-205ENST00000578314 ANAPC1Q9H1A4 1944 aa24.28■■□□□ 1.48
VAPA-205ENST00000578314 BICDL2A1A5D9 508 aa24.28■■□□□ 1.48
VAPA-205ENST00000578314 BIN1O00499 593 aa24.28■■□□□ 1.48
VAPA-205ENST00000578314 COCHO43405 550 aa24.28■■□□□ 1.48
VAPA-205ENST00000578314 LILRB5O75023 590 aa24.28■■□□□ 1.48
VAPA-205ENST00000578314 GALK1P51570 392 aa24.28■■□□□ 1.48
VAPA-205ENST00000578314 NRLP54845 237 aa24.28■■□□□ 1.48
VAPA-205ENST00000578314 NR1H3Q13133 447 aa24.28■■□□□ 1.48
VAPA-205ENST00000578314 ZNF394Q53GI3 561 aa24.28■■□□□ 1.48
VAPA-205ENST00000578314 DDX42Q86XP3 938 aaKnown RBP eCLIP24.28■■□□□ 1.48
VAPA-205ENST00000578314 TMEM176AQ96HP8 235 aa24.28■■□□□ 1.48
VAPA-205ENST00000578314 HEXIM2Q96MH2 286 aaKnown RBP24.28■■□□□ 1.48
VAPA-205ENST00000578314 ARID3AQ99856 593 aa24.28■■□□□ 1.48
VAPA-205ENST00000578314 DUSP16Q9BY84 665 aa24.28■■□□□ 1.48
VAPA-205ENST00000578314 FBRSL1Q9HCM7 1045 aaKnown RBP24.28■■□□□ 1.48
VAPA-205ENST00000578314 NFATC1O95644 943 aa24.27■■□□□ 1.48
VAPA-205ENST00000578314 MBL2P11226 248 aaPredicted RBP24.27■■□□□ 1.48
VAPA-205ENST00000578314 RAD23BP54727 409 aa24.27■■□□□ 1.48
VAPA-205ENST00000578314 SATB1Q01826 763 aa24.27■■□□□ 1.48
VAPA-205ENST00000578314 PPP1R26Q5T8A7 1209 aaPredicted RBP24.27■■□□□ 1.48
VAPA-205ENST00000578314 GPRIN1Q7Z2K8 1008 aa24.27■■□□□ 1.48
VAPA-205ENST00000578314 ADGRG2Q8IZP9 1017 aa24.27■■□□□ 1.48
VAPA-205ENST00000578314 SLC4A11Q8NBS3 891 aa24.27■■□□□ 1.48
VAPA-205ENST00000578314 EXOC4Q96A65 974 aa24.27■■□□□ 1.48
VAPA-205ENST00000578314 P2RY13Q9BPV8 354 aa24.27■■□□□ 1.48
VAPA-205ENST00000578314 SMPD4Q9NXE4 827 aa24.27■■□□□ 1.48
VAPA-205ENST00000578314 SCML2Q9UQR0 700 aa24.27■■□□□ 1.48
VAPA-205ENST00000578314 SLC9A3R1O14745 358 aaPredicted RBP24.26■■□□□ 1.47
VAPA-205ENST00000578314 DRD1P21728 446 aa24.26■■□□□ 1.47
VAPA-205ENST00000578314 FMO5P49326 533 aa24.26■■□□□ 1.47
VAPA-205ENST00000578314 PGFP49763 221 aa24.26■■□□□ 1.47
VAPA-205ENST00000578314 CUL2Q13617 745 aa24.26■■□□□ 1.47
VAPA-205ENST00000578314 TRIML1Q8N9V2 468 aa24.26■■□□□ 1.47
VAPA-205ENST00000578314 SUMF1Q8NBK3 374 aa24.26■■□□□ 1.47
VAPA-205ENST00000578314 ZFRQ96KR1 1074 aaKnown RBP24.26■■□□□ 1.47
VAPA-205ENST00000578314 CCSER2Q9H7U1 834 aa24.26■■□□□ 1.47
VAPA-205ENST00000578314 TLR8Q9NR97 1041 aaKnown RBP24.26■■□□□ 1.47
VAPA-205ENST00000578314 KIAA1468Q9P260 1216 aa24.26■■□□□ 1.47
VAPA-205ENST00000578314 CFAP97Q9P2B7 532 aa24.26■■□□□ 1.47
VAPA-205ENST00000578314 E2F8A0AVK6 867 aa24.25■■□□□ 1.47
VAPA-205ENST00000578314 PAK1Q13153 545 aa24.25■■□□□ 1.47
VAPA-205ENST00000578314 CCDC40Q4G0X9 1142 aa24.25■■□□□ 1.47
VAPA-205ENST00000578314 ARHGAP17Q68EM7 881 aa24.25■■□□□ 1.47
VAPA-205ENST00000578314 UBXN6Q9BZV1 441 aa24.25■■□□□ 1.47
VAPA-205ENST00000578314 CTNND2Q9UQB3 1225 aa24.25■■□□□ 1.47
VAPA-205ENST00000578314 EP300Q09472 2414 aaPredicted RBP24.24■■□□□ 1.47
VAPA-205ENST00000578314 ZNF638Q14966 1978 aaKnown RBP24.24■■□□□ 1.47
VAPA-205ENST00000578314 K7ESF4 209 aa24.24■■□□□ 1.47
VAPA-205ENST00000578314 EGFP01133 1207 aa24.24■■□□□ 1.47
VAPA-205ENST00000578314 ACO1P21399 889 aaKnown RBP24.24■■□□□ 1.47
VAPA-205ENST00000578314 KIF11P52732 1056 aa24.24■■□□□ 1.47
VAPA-205ENST00000578314 NAIF1Q69YI7 327 aaPredicted RBP24.24■■□□□ 1.47
VAPA-205ENST00000578314 CD101Q93033 1021 aa24.24■■□□□ 1.47
VAPA-205ENST00000578314 C2orf42Q9NWW7 574 aa24.24■■□□□ 1.47
VAPA-205ENST00000578314 TBC1D14Q9P2M4 693 aa24.24■■□□□ 1.47
VAPA-205ENST00000578314 P4HA2O15460 535 aa24.23■■□□□ 1.47
VAPA-205ENST00000578314 TLR5O60602 858 aa24.23■■□□□ 1.47
VAPA-205ENST00000578314 GNA14O95837 355 aa24.23■■□□□ 1.47
VAPA-205ENST00000578314 TBXAS1P24557 533 aaPredicted RBP24.23■■□□□ 1.47
VAPA-205ENST00000578314 HOXA6P31267 233 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms