RNA–Protein interactions for RNA: ENST00000578240.1

CTC1-203, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-203ENST00000578240 PYGMP11217 842 aa13.76□□□□□ -0.21
CTC1-203ENST00000578240 RPL17P18621 184 aaKnown RBP13.76□□□□□ -0.21
CTC1-203ENST00000578240 GPD1P21695 349 aa13.76□□□□□ -0.21
CTC1-203ENST00000578240 IL1R2P27930 398 aa13.76□□□□□ -0.21
CTC1-203ENST00000578240 ZNF143P52747 638 aaPredicted RBP13.76□□□□□ -0.21
CTC1-203ENST00000578240 TERF1P54274 439 aa13.76□□□□□ -0.21
CTC1-203ENST00000578240 DAOAP59103 153 aa13.76□□□□□ -0.21
CTC1-203ENST00000578240 PITX1P78337 314 aaPredicted RBP13.76□□□□□ -0.21
CTC1-203ENST00000578240 MRPS5P82675 430 aaKnown RBP13.76□□□□□ -0.21
CTC1-203ENST00000578240 C2orf54Q08AI8 447 aa13.76□□□□□ -0.21
CTC1-203ENST00000578240 PIGHQ14442 188 aaPredicted RBP13.76□□□□□ -0.21
CTC1-203ENST00000578240 LRIT3Q3SXY7 679 aa13.76□□□□□ -0.21
CTC1-203ENST00000578240 ARCQ7LC44 396 aa13.76□□□□□ -0.21
CTC1-203ENST00000578240 SPATA2LQ8IUW3 424 aaPredicted RBP13.76□□□□□ -0.21
CTC1-203ENST00000578240 ZDHHC14Q8IZN3 488 aa13.76□□□□□ -0.21
CTC1-203ENST00000578240 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.76□□□□□ -0.21
CTC1-203ENST00000578240 PIK3R5Q8WYR1 880 aa13.76□□□□□ -0.21
CTC1-203ENST00000578240 PBKQ96KB5 322 aa13.76□□□□□ -0.21
CTC1-203ENST00000578240 HERC2P3Q9BVR0 1158 aa13.76□□□□□ -0.21
CTC1-203ENST00000578240 UBXN6Q9BZV1 441 aa13.76□□□□□ -0.21
CTC1-203ENST00000578240 PNPLA8Q9NP80 782 aa13.76□□□□□ -0.21
CTC1-203ENST00000578240 KLHL11Q9NVR0 708 aa13.76□□□□□ -0.21
CTC1-203ENST00000578240 ABI2Q9NYB9 513 aaPredicted RBP13.76□□□□□ -0.21
CTC1-203ENST00000578240 USTQ9Y2C2 406 aa13.76□□□□□ -0.21
CTC1-203ENST00000578240 WDR27A2RRH5 827 aa13.75□□□□□ -0.21
CTC1-203ENST00000578240 YJEFN3A6XGL0 299 aa13.75□□□□□ -0.21
CTC1-203ENST00000578240 E7ENQ6 273 aa13.75□□□□□ -0.21
CTC1-203ENST00000578240 SOX1O00570 391 aaPredicted RBP13.75□□□□□ -0.21
CTC1-203ENST00000578240 CEP104O60308 925 aa13.75□□□□□ -0.21
CTC1-203ENST00000578240 DAB1O75553 588 aa13.75□□□□□ -0.21
CTC1-203ENST00000578240 ARHGEF15O94989 841 aa13.75□□□□□ -0.21
CTC1-203ENST00000578240 SOD2P04179 222 aa13.75□□□□□ -0.21
CTC1-203ENST00000578240 RNASE9P60153 205 aaKnown RBP13.75□□□□□ -0.21
CTC1-203ENST00000578240 ROR1Q01973 937 aa13.75□□□□□ -0.21
CTC1-203ENST00000578240 PSMD5Q16401 504 aa13.75□□□□□ -0.21
CTC1-203ENST00000578240 USP41Q3LFD5 358 aa13.75□□□□□ -0.21
CTC1-203ENST00000578240 ATP13A4Q4VNC1 1196 aa13.75□□□□□ -0.21
CTC1-203ENST00000578240 SLC8B1Q6J4K2 584 aa13.75□□□□□ -0.21
CTC1-203ENST00000578240 CC2D1AQ6P1N0 951 aaPredicted RBP13.75□□□□□ -0.21
CTC1-203ENST00000578240 RNF19BQ6ZMZ0 732 aa13.75□□□□□ -0.21
CTC1-203ENST00000578240 C4orf50Q6ZRC1 276 aa13.75□□□□□ -0.21
CTC1-203ENST00000578240 ANKS3Q6ZW76 656 aa13.75□□□□□ -0.21
CTC1-203ENST00000578240 BNIPLQ7Z465 357 aa13.75□□□□□ -0.21
CTC1-203ENST00000578240 SPRED2Q7Z698 418 aa13.75□□□□□ -0.21
CTC1-203ENST00000578240 HERC6Q8IVU3 1022 aa13.75□□□□□ -0.21
CTC1-203ENST00000578240 CEP112Q8N8E3 955 aa13.75□□□□□ -0.21
CTC1-203ENST00000578240 ATAD1Q8NBU5 361 aa13.75□□□□□ -0.21
CTC1-203ENST00000578240 ACTRT1Q8TDG2 376 aa13.75□□□□□ -0.21
CTC1-203ENST00000578240 CLP1Q92989 425 aaKnown RBP13.75□□□□□ -0.21
CTC1-203ENST00000578240 ACSF2Q96CM8 615 aaPredicted RBP13.75□□□□□ -0.21
CTC1-203ENST00000578240 FUBP3Q96I24 572 aaKnown RBP eCLIP13.75□□□□□ -0.21
CTC1-203ENST00000578240 TTC7AQ9ULT0 858 aaPredicted RBP13.75□□□□□ -0.21
CTC1-203ENST00000578240 CDY1Q9Y6F8 540 aa13.75□□□□□ -0.21
CTC1-203ENST00000578240 USP3Q9Y6I4 520 aa13.75□□□□□ -0.21
CTC1-203ENST00000578240 SHROOM3Q8TF72 1996 aa13.75□□□□□ -0.21
CTC1-203ENST00000578240 SOAT2O75908 522 aa13.75□□□□□ -0.21
CTC1-203ENST00000578240 PDGFRAP16234 1089 aa13.75□□□□□ -0.21
CTC1-203ENST00000578240 PTPN9P43378 593 aa13.75□□□□□ -0.21
CTC1-203ENST00000578240 PGFP49763 221 aa13.75□□□□□ -0.21
CTC1-203ENST00000578240 SLC5A3P53794 718 aa13.75□□□□□ -0.21
CTC1-203ENST00000578240 SLC8A3P57103 927 aa13.75□□□□□ -0.21
CTC1-203ENST00000578240 DSG1Q02413 1049 aa13.75□□□□□ -0.21
CTC1-203ENST00000578240 ITIH3Q06033 890 aa13.75□□□□□ -0.21
CTC1-203ENST00000578240 CKAP4Q07065 602 aaKnown RBP13.75□□□□□ -0.21
CTC1-203ENST00000578240 GPR17Q13304 367 aa13.75□□□□□ -0.21
CTC1-203ENST00000578240 SPOUT1Q5T280 376 aaKnown RBP13.75□□□□□ -0.21
CTC1-203ENST00000578240 SDHAF4Q5VUM1 108 aa13.75□□□□□ -0.21
CTC1-203ENST00000578240 KATNAL2Q8IYT4 538 aa13.75□□□□□ -0.21
CTC1-203ENST00000578240 DCP1BQ8IZD4 617 aaKnown RBP13.75□□□□□ -0.21
CTC1-203ENST00000578240 UBL4BQ8N7F7 174 aa13.75□□□□□ -0.21
CTC1-203ENST00000578240 MNS1Q8NEH6 495 aa13.75□□□□□ -0.21
CTC1-203ENST00000578240 SCAMP5Q8TAC9 235 aa13.75□□□□□ -0.21
CTC1-203ENST00000578240 RIN2Q8WYP3 895 aaPredicted RBP13.75□□□□□ -0.21
CTC1-203ENST00000578240 LRCH3Q96II8 777 aa13.75□□□□□ -0.21
CTC1-203ENST00000578240 SLC2A13Q96QE2 648 aa13.75□□□□□ -0.21
CTC1-203ENST00000578240 CNPY3Q9BT09 278 aa13.75□□□□□ -0.21
CTC1-203ENST00000578240 LRRC4Q9HBW1 653 aa13.75□□□□□ -0.21
CTC1-203ENST00000578240 CNGB3Q9NQW8 809 aa13.75□□□□□ -0.21
CTC1-203ENST00000578240 RBM12Q9NTZ6 932 aaKnown RBP13.75□□□□□ -0.21
CTC1-203ENST00000578240 LCMT1Q9UIC8 334 aa13.75□□□□□ -0.21
CTC1-203ENST00000578240 NR2E1Q9Y466 385 aa13.75□□□□□ -0.21
CTC1-203ENST00000578240 NUP205Q92621 2012 aa13.75□□□□□ -0.21
CTC1-203ENST00000578240 NOTCH4Q99466 2003 aa13.75□□□□□ -0.21
CTC1-203ENST00000578240 MYO9BQ13459 2157 aa13.74□□□□□ -0.21
CTC1-203ENST00000578240 TCRBV7S2A1N4TA0A589 114 aa13.74□□□□□ -0.21
CTC1-203ENST00000578240 EFCAB8A8MWE9 144 aa13.74□□□□□ -0.21
CTC1-203ENST00000578240 PGRMC1O00264 195 aaKnown RBP13.74□□□□□ -0.21
CTC1-203ENST00000578240 HSF2BPO75031 334 aa13.74□□□□□ -0.21
CTC1-203ENST00000578240 USP17L7P0C7H9 530 aa13.74□□□□□ -0.21
CTC1-203ENST00000578240 CPB1P15086 417 aa13.74□□□□□ -0.21
CTC1-203ENST00000578240 MIPP30301 263 aa13.74□□□□□ -0.21
CTC1-203ENST00000578240 GJC1P36383 396 aa13.74□□□□□ -0.21
CTC1-203ENST00000578240 MAGEA11P43364 429 aa13.74□□□□□ -0.21
CTC1-203ENST00000578240 ATXN1P54253 815 aaKnown RBP13.74□□□□□ -0.21
CTC1-203ENST00000578240 HDAC4P56524 1084 aa13.74□□□□□ -0.21
CTC1-203ENST00000578240 RWDD2BP57060 319 aa13.74□□□□□ -0.21
CTC1-203ENST00000578240 SIX1Q15475 284 aaPredicted RBP13.74□□□□□ -0.21
CTC1-203ENST00000578240 NFE2Q16621 373 aaPredicted RBP13.74□□□□□ -0.21
CTC1-203ENST00000578240 ERCC6LQ2NKX8 1250 aa13.74□□□□□ -0.21
CTC1-203ENST00000578240 C9orf50Q5SZB4 431 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms