RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 H7C0C1 242 aa18.33■□□□□ 0.53
ERBB2-205ENST00000578199 GRM5P41594 1212 aa18.33■□□□□ 0.53
ERBB2-205ENST00000578199 ATP5OP48047 213 aa18.33■□□□□ 0.53
ERBB2-205ENST00000578199 ATXN1P54253 815 aaKnown RBP18.33■□□□□ 0.53
ERBB2-205ENST00000578199 GEMIN4P57678 1058 aaKnown RBP18.33■□□□□ 0.53
ERBB2-205ENST00000578199 ROR1Q01973 937 aa18.33■□□□□ 0.53
ERBB2-205ENST00000578199 KRT81Q14533 505 aa18.33■□□□□ 0.53
ERBB2-205ENST00000578199 FAXCQ5TGI0 409 aa18.33■□□□□ 0.53
ERBB2-205ENST00000578199 OR6J1Q8NGC5 347 aa18.33■□□□□ 0.53
ERBB2-205ENST00000578199 FAM172AQ8WUF8 416 aa18.33■□□□□ 0.53
ERBB2-205ENST00000578199 KHSRPQ92945 711 aaKnown RBP eCLIP18.33■□□□□ 0.53
ERBB2-205ENST00000578199 MS4A4AQ96JQ5 239 aa18.33■□□□□ 0.53
ERBB2-205ENST00000578199 YY1AP1Q9H869 796 aa18.33■□□□□ 0.53
ERBB2-205ENST00000578199 PSMC3IPQ9P2W1 217 aaPredicted RBP18.33■□□□□ 0.53
ERBB2-205ENST00000578199 CCL15-CCL14A0A0B4J2E2 113 aa18.33■□□□□ 0.52
ERBB2-205ENST00000578199 ENDOD1O94919 500 aa18.33■□□□□ 0.52
ERBB2-205ENST00000578199 PDGFRBP09619 1106 aa18.33■□□□□ 0.52
ERBB2-205ENST00000578199 XRCC4Q13426 336 aa18.33■□□□□ 0.52
ERBB2-205ENST00000578199 ACAP1Q15027 740 aa18.33■□□□□ 0.52
ERBB2-205ENST00000578199 CCL15Q16663 113 aa18.33■□□□□ 0.52
ERBB2-205ENST00000578199 TBC1D1Q86TI0 1168 aaPredicted RBP18.33■□□□□ 0.52
ERBB2-205ENST00000578199 OR6B3Q8NGW1 331 aa18.33■□□□□ 0.52
ERBB2-205ENST00000578199 ZC3H15Q8WU90 426 aaKnown RBP18.33■□□□□ 0.52
ERBB2-205ENST00000578199 SGSM3Q96HU1 749 aa18.33■□□□□ 0.52
ERBB2-205ENST00000578199 PRKAG3Q9UGI9 489 aa18.33■□□□□ 0.52
ERBB2-205ENST00000578199 ZMYND8Q9ULU4 1186 aaPredicted RBP18.33■□□□□ 0.52
ERBB2-205ENST00000578199 LOC102724159A0A0B4J2E5 919 aa18.32■□□□□ 0.52
ERBB2-205ENST00000578199 DNAJC8O75937 253 aaPredicted RBP18.32■□□□□ 0.52
ERBB2-205ENST00000578199 YARSP54577 528 aaKnown RBP18.32■□□□□ 0.52
ERBB2-205ENST00000578199 NOMO1Q15155 1222 aa18.32■□□□□ 0.52
ERBB2-205ENST00000578199 PWP2Q15269 919 aaKnown RBP18.32■□□□□ 0.52
ERBB2-205ENST00000578199 EFHC2Q5JST6 749 aa18.32■□□□□ 0.52
ERBB2-205ENST00000578199 OLFML1Q6UWY5 402 aa18.32■□□□□ 0.52
ERBB2-205ENST00000578199 GPR142Q7Z601 462 aa18.32■□□□□ 0.52
ERBB2-205ENST00000578199 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.32■□□□□ 0.52
ERBB2-205ENST00000578199 EMID1Q96A84 441 aaPredicted RBP18.32■□□□□ 0.52
ERBB2-205ENST00000578199 LENG1Q96BZ8 264 aaPredicted RBP18.32■□□□□ 0.52
ERBB2-205ENST00000578199 RNF157Q96PX1 679 aa18.32■□□□□ 0.52
ERBB2-205ENST00000578199 PAFAH2Q99487 392 aa18.32■□□□□ 0.52
ERBB2-205ENST00000578199 NXF3Q9H4D5 531 aaKnown RBP18.32■□□□□ 0.52
ERBB2-205ENST00000578199 SPON1Q9HCB6 807 aa18.32■□□□□ 0.52
ERBB2-205ENST00000578199 KLK14Q9P0G3 267 aa18.32■□□□□ 0.52
ERBB2-205ENST00000578199 COL1A2P08123 1366 aa18.32■□□□□ 0.52
ERBB2-205ENST00000578199 PAPSS1O43252 624 aaPredicted RBP18.32■□□□□ 0.52
ERBB2-205ENST00000578199 FGFR1P11362 822 aa18.32■□□□□ 0.52
ERBB2-205ENST00000578199 ELK3P41970 407 aa18.32■□□□□ 0.52
ERBB2-205ENST00000578199 MTFR1Q15390 333 aa18.32■□□□□ 0.52
ERBB2-205ENST00000578199 PPP6R3Q5H9R7 873 aaPredicted RBP18.32■□□□□ 0.52
ERBB2-205ENST00000578199 CATSPER4Q7RTX7 472 aa18.32■□□□□ 0.52
ERBB2-205ENST00000578199 PDIK1LQ8N165 341 aa18.32■□□□□ 0.52
ERBB2-205ENST00000578199 CCDC63Q8NA47 563 aa18.32■□□□□ 0.52
ERBB2-205ENST00000578199 ATP11CQ8NB49 1132 aa18.32■□□□□ 0.52
ERBB2-205ENST00000578199 BRI3BPQ8WY22 251 aa18.32■□□□□ 0.52
ERBB2-205ENST00000578199 MAML3Q96JK9 1138 aa18.32■□□□□ 0.52
ERBB2-205ENST00000578199 FRMD8P1Q9BZ68 369 aaPredicted RBP18.32■□□□□ 0.52
ERBB2-205ENST00000578199 ARL2BPQ9Y2Y0 163 aa18.32■□□□□ 0.52
ERBB2-205ENST00000578199 BRCA2P51587 3418 aa18.32■□□□□ 0.52
ERBB2-205ENST00000578199 WDR91A4D1P6 747 aa18.31■□□□□ 0.52
ERBB2-205ENST00000578199 KCNN4O15554 427 aa18.31■□□□□ 0.52
ERBB2-205ENST00000578199 TYROBPO43914 113 aa18.31■□□□□ 0.52
ERBB2-205ENST00000578199 NR1H3Q13133 447 aa18.31■□□□□ 0.52
ERBB2-205ENST00000578199 ZNF618Q5T7W0 954 aa18.31■□□□□ 0.52
ERBB2-205ENST00000578199 ICE2Q659A1 982 aa18.31■□□□□ 0.52
ERBB2-205ENST00000578199 SUGP1Q8IWZ8 645 aaKnown RBP18.31■□□□□ 0.52
ERBB2-205ENST00000578199 AGGF1Q8N302 714 aaeCLIP18.31■□□□□ 0.52
ERBB2-205ENST00000578199 PQLC3Q8N755 202 aa18.31■□□□□ 0.52
ERBB2-205ENST00000578199 PLD5Q8N7P1 536 aa18.31■□□□□ 0.52
ERBB2-205ENST00000578199 ADAMTS10Q9H324 1103 aa18.31■□□□□ 0.52
ERBB2-205ENST00000578199 SLC24A2Q9UI40 661 aa18.31■□□□□ 0.52
ERBB2-205ENST00000578199 CLEC11AQ9Y240 323 aa18.31■□□□□ 0.52
ERBB2-205ENST00000578199 PRPF4O43172 522 aaKnown RBP eCLIP18.31■□□□□ 0.521e-6■■■■□ 22.3
ERBB2-205ENST00000578199 RBL1P28749 1068 aa18.31■□□□□ 0.52
ERBB2-205ENST00000578199 ACVR2BQ13705 512 aa18.31■□□□□ 0.52
ERBB2-205ENST00000578199 DUSP28Q4G0W2 176 aa18.31■□□□□ 0.52
ERBB2-205ENST00000578199 PKDCCQ504Y2 493 aa18.31■□□□□ 0.52
ERBB2-205ENST00000578199 SESTD1Q86VW0 696 aa18.31■□□□□ 0.52
ERBB2-205ENST00000578199 NPLOC4Q8TAT6 608 aa18.31■□□□□ 0.52
ERBB2-205ENST00000578199 SLC35F5Q8WV83 523 aa18.31■□□□□ 0.52
ERBB2-205ENST00000578199 SYT17Q9BSW7 474 aa18.31■□□□□ 0.52
ERBB2-205ENST00000578199 USP29Q9HBJ7 922 aa18.31■□□□□ 0.52
ERBB2-205ENST00000578199 E7ESA3 106 aa18.3■□□□□ 0.52
ERBB2-205ENST00000578199 DYNC1LI2O43237 492 aaPredicted RBP18.3■□□□□ 0.52
ERBB2-205ENST00000578199 CCDC130P13994 396 aa18.3■□□□□ 0.52
ERBB2-205ENST00000578199 LMO2P25791 158 aa18.3■□□□□ 0.52
ERBB2-205ENST00000578199 ADORA2BP29275 332 aa18.3■□□□□ 0.52
ERBB2-205ENST00000578199 PHBP35232 272 aa18.3■□□□□ 0.52
ERBB2-205ENST00000578199 SLC6A3Q01959 620 aa18.3■□□□□ 0.52
ERBB2-205ENST00000578199 SPARCL1Q14515 664 aa18.3■□□□□ 0.52
ERBB2-205ENST00000578199 HIC1Q14526 733 aa18.3■□□□□ 0.52
ERBB2-205ENST00000578199 DGKDQ16760 1214 aa18.3■□□□□ 0.52
ERBB2-205ENST00000578199 KYAT1Q16773 422 aa18.3■□□□□ 0.52
ERBB2-205ENST00000578199 SOWAHAQ2M3V2 549 aa18.3■□□□□ 0.52
ERBB2-205ENST00000578199 LVRNQ6Q4G3 990 aa18.3■□□□□ 0.52
ERBB2-205ENST00000578199 ECHDC2Q86YB7 292 aa18.3■□□□□ 0.52
ERBB2-205ENST00000578199 PARP9Q8IXQ6 854 aa18.3■□□□□ 0.52
ERBB2-205ENST00000578199 PCDH19Q8TAB3 1148 aa18.3■□□□□ 0.52
ERBB2-205ENST00000578199 SNRNP25Q9BV90 132 aaKnown RBP18.3■□□□□ 0.52
ERBB2-205ENST00000578199 ECT2Q9H8V3 914 aa18.3■□□□□ 0.52
ERBB2-205ENST00000578199 RAB6BQ9NRW1 208 aa18.3■□□□□ 0.52
ERBB2-205ENST00000578199 PHTF1Q9UMS5 762 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms