RNA–Protein interactions for RNA: ENST00000578148.1

RAB11FIP4-202, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 3

Gene RAB11FIP4, Length 403 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-202ENST00000578148 DPEP3Q9H4B8 488 aa9.43□□□□□ -0.9
RAB11FIP4-202ENST00000578148 VRTNQ9H8Y1 702 aa9.43□□□□□ -0.9
RAB11FIP4-202ENST00000578148 SMPD4Q9NXE4 827 aa9.43□□□□□ -0.9
RAB11FIP4-202ENST00000578148 CFAP97Q9P2B7 532 aa9.43□□□□□ -0.9
RAB11FIP4-202ENST00000578148 TBC1D14Q9P2M4 693 aa9.43□□□□□ -0.9
RAB11FIP4-202ENST00000578148 CGNQ9P2M7 1197 aaKnown RBP9.43□□□□□ -0.9
RAB11FIP4-202ENST00000578148 E2F8A0AVK6 867 aa9.42□□□□□ -0.9
RAB11FIP4-202ENST00000578148 C4orf47A7E2U8 309 aa9.42□□□□□ -0.9
RAB11FIP4-202ENST00000578148 A8MXQ7 604 aa9.42□□□□□ -0.9
RAB11FIP4-202ENST00000578148 K7ELQ4 463 aaPredicted RBP9.42□□□□□ -0.9
RAB11FIP4-202ENST00000578148 KHNYNO15037 678 aaKnown RBP9.42□□□□□ -0.9
RAB11FIP4-202ENST00000578148 CLIC2O15247 247 aa9.42□□□□□ -0.9
RAB11FIP4-202ENST00000578148 CUTAO60888 179 aa9.42□□□□□ -0.9
RAB11FIP4-202ENST00000578148 KAT7O95251 611 aa9.42□□□□□ -0.9
RAB11FIP4-202ENST00000578148 ABL1P00519 1130 aa9.42□□□□□ -0.9
RAB11FIP4-202ENST00000578148 CST3P01034 146 aaPredicted RBP9.42□□□□□ -0.9
RAB11FIP4-202ENST00000578148 ADH5P11766 374 aa9.42□□□□□ -0.9
RAB11FIP4-202ENST00000578148 HNRNPLP14866 589 aaKnown RBP eCLIP9.42□□□□□ -0.9
RAB11FIP4-202ENST00000578148 BCKDHBP21953 392 aa9.42□□□□□ -0.9
RAB11FIP4-202ENST00000578148 YWHAQP27348 245 aa9.42□□□□□ -0.9
RAB11FIP4-202ENST00000578148 KIR2DL1P43626 348 aaPredicted RBP9.42□□□□□ -0.9
RAB11FIP4-202ENST00000578148 TUBP50607 506 aa9.42□□□□□ -0.9
RAB11FIP4-202ENST00000578148 NOVA1P51513 510 aaKnown RBP9.42□□□□□ -0.9
RAB11FIP4-202ENST00000578148 MYL6P60660 151 aa9.42□□□□□ -0.9
RAB11FIP4-202ENST00000578148 TRPC3Q13507 836 aa9.42□□□□□ -0.9
RAB11FIP4-202ENST00000578148 EOGTQ5NDL2 527 aa9.42□□□□□ -0.9
RAB11FIP4-202ENST00000578148 DAB2IPQ5VWQ8 1189 aa9.42□□□□□ -0.9
RAB11FIP4-202ENST00000578148 PSAPL1Q6NUJ1 521 aa9.42□□□□□ -0.9
RAB11FIP4-202ENST00000578148 RHBDF2Q6PJF5 856 aa9.42□□□□□ -0.9
RAB11FIP4-202ENST00000578148 SHC4Q6S5L8 630 aa9.42□□□□□ -0.9
RAB11FIP4-202ENST00000578148 TMEM92Q6UXU6 159 aa9.42□□□□□ -0.9
RAB11FIP4-202ENST00000578148 FAM35AQ86V20 835 aa9.42□□□□□ -0.9
RAB11FIP4-202ENST00000578148 C12orf40Q86WS4 652 aa9.42□□□□□ -0.9
RAB11FIP4-202ENST00000578148 NELFCDQ8IXH7 590 aa9.42□□□□□ -0.9
RAB11FIP4-202ENST00000578148 NUP93Q8N1F7 819 aa9.42□□□□□ -0.9
RAB11FIP4-202ENST00000578148 CCDC33Q8N5R6 958 aa9.42□□□□□ -0.9
RAB11FIP4-202ENST00000578148 ALLCQ8N6M5 410 aa9.42□□□□□ -0.9
RAB11FIP4-202ENST00000578148 IL17RCQ8NAC3 791 aa9.42□□□□□ -0.9
RAB11FIP4-202ENST00000578148 RDH13Q8NBN7 331 aa9.42□□□□□ -0.9
RAB11FIP4-202ENST00000578148 WHAMMQ8TF30 809 aa9.42□□□□□ -0.9
RAB11FIP4-202ENST00000578148 FBXO32Q969P5 355 aa9.42□□□□□ -0.9
RAB11FIP4-202ENST00000578148 OTUB2Q96DC9 234 aa9.42□□□□□ -0.9
RAB11FIP4-202ENST00000578148 ZFRQ96KR1 1074 aaKnown RBP9.42□□□□□ -0.9
RAB11FIP4-202ENST00000578148 SPACA7Q96KW9 195 aa9.42□□□□□ -0.9
RAB11FIP4-202ENST00000578148 ZNF396Q96N95 335 aaPredicted RBP9.42□□□□□ -0.9
RAB11FIP4-202ENST00000578148 PNKPQ96T60 521 aa9.42□□□□□ -0.9
RAB11FIP4-202ENST00000578148 B3GNT5Q9BYG0 378 aa9.42□□□□□ -0.9
RAB11FIP4-202ENST00000578148 POLMQ9NP87 494 aaPredicted RBP9.42□□□□□ -0.9
RAB11FIP4-202ENST00000578148 DMAP1Q9NPF5 467 aaPredicted RBP9.42□□□□□ -0.9
RAB11FIP4-202ENST00000578148 TMEM9BQ9NQ34 198 aa9.42□□□□□ -0.9
RAB11FIP4-202ENST00000578148 ARHGEF4Q9NR80 690 aa9.42□□□□□ -0.9
RAB11FIP4-202ENST00000578148 EVLQ9UI08 416 aaPredicted RBP9.42□□□□□ -0.9
RAB11FIP4-202ENST00000578148 ZFYVE26Q68DK2 2539 aa9.42□□□□□ -0.9
RAB11FIP4-202ENST00000578148 CEP192Q8TEP8 1941 aa9.41□□□□□ -0.9
RAB11FIP4-202ENST00000578148 A0A0A0MRY4 1105 aa9.41□□□□□ -0.9
RAB11FIP4-202ENST00000578148 PVALEFA0A1B0GWK0 134 aa9.41□□□□□ -0.9
RAB11FIP4-202ENST00000578148 FAM92AA1XBS5 289 aa9.41□□□□□ -0.9
RAB11FIP4-202ENST00000578148 ANTXRLA6NF34 631 aa9.41□□□□□ -0.9
RAB11FIP4-202ENST00000578148 SGK1O00141 431 aa9.41□□□□□ -0.9
RAB11FIP4-202ENST00000578148 CLDN5O00501 218 aa9.41□□□□□ -0.9
RAB11FIP4-202ENST00000578148 SCAMP3O14828 347 aaKnown RBP9.41□□□□□ -0.9
RAB11FIP4-202ENST00000578148 HOXC11O43248 304 aaPredicted RBP9.41□□□□□ -0.9
RAB11FIP4-202ENST00000578148 COCHO43405 550 aa9.41□□□□□ -0.9
RAB11FIP4-202ENST00000578148 EXOC3O60645 756 aa9.41□□□□□ -0.9
RAB11FIP4-202ENST00000578148 KLF8O95600 359 aaPredicted RBP9.41□□□□□ -0.9
RAB11FIP4-202ENST00000578148 CSRP1P21291 193 aaKnown RBP9.41□□□□□ -0.9
RAB11FIP4-202ENST00000578148 P2RY2P41231 377 aa9.41□□□□□ -0.9
RAB11FIP4-202ENST00000578148 GRIA2P42262 883 aa9.41□□□□□ -0.9
RAB11FIP4-202ENST00000578148 DPP6P42658 865 aa9.41□□□□□ -0.9
RAB11FIP4-202ENST00000578148 TNFRSF4P43489 277 aa9.41□□□□□ -0.9
RAB11FIP4-202ENST00000578148 SLC6A11P48066 632 aa9.41□□□□□ -0.9
RAB11FIP4-202ENST00000578148 DHPSP49366 369 aaPredicted RBP9.41□□□□□ -0.9
RAB11FIP4-202ENST00000578148 PSEN1P49768 467 aa9.41□□□□□ -0.9
RAB11FIP4-202ENST00000578148 AP3M2P53677 418 aa9.41□□□□□ -0.9
RAB11FIP4-202ENST00000578148 SLC5A3P53794 718 aa9.41□□□□□ -0.9
RAB11FIP4-202ENST00000578148 KDSRQ06136 332 aa9.41□□□□□ -0.9
RAB11FIP4-202ENST00000578148 MESP2Q0VG99 397 aa9.41□□□□□ -0.9
RAB11FIP4-202ENST00000578148 IFRD2Q12894 506 aaPredicted RBP9.41□□□□□ -0.9
RAB11FIP4-202ENST00000578148 ZNF699Q32M78 642 aa9.41□□□□□ -0.9
RAB11FIP4-202ENST00000578148 HECTD3Q5T447 861 aa9.41□□□□□ -0.9
RAB11FIP4-202ENST00000578148 SNX30Q5VWJ9 437 aa9.41□□□□□ -0.9
RAB11FIP4-202ENST00000578148 TRMT11Q7Z4G4 463 aaKnown RBP9.41□□□□□ -0.9
RAB11FIP4-202ENST00000578148 SFTPA1Q8IWL2 248 aa9.41□□□□□ -0.9
RAB11FIP4-202ENST00000578148 ETFBKMTQ8IXQ9 262 aa9.41□□□□□ -0.9
RAB11FIP4-202ENST00000578148 PHTF2Q8N3S3 785 aa9.41□□□□□ -0.9
RAB11FIP4-202ENST00000578148 TXNDC5Q8NBS9 432 aaKnown RBP9.41□□□□□ -0.9
RAB11FIP4-202ENST00000578148 GOLGA5Q8TBA6 731 aa9.41□□□□□ -0.9
RAB11FIP4-202ENST00000578148 ZNF516Q92618 1163 aa9.41□□□□□ -0.9
RAB11FIP4-202ENST00000578148 SMARCD1Q96GM5 515 aa9.41□□□□□ -0.9
RAB11FIP4-202ENST00000578148 TNIP3Q96KP6 325 aa9.41□□□□□ -0.9
RAB11FIP4-202ENST00000578148 SMYD3Q9H7B4 428 aa9.41□□□□□ -0.9
RAB11FIP4-202ENST00000578148 KRT82Q9NSB4 513 aa9.41□□□□□ -0.9
RAB11FIP4-202ENST00000578148 COMMD8Q9NX08 183 aa9.41□□□□□ -0.9
RAB11FIP4-202ENST00000578148 IL37Q9NZH6 218 aa9.41□□□□□ -0.9
RAB11FIP4-202ENST00000578148 NXF1Q9UBU9 619 aaKnown RBP9.41□□□□□ -0.9
RAB11FIP4-202ENST00000578148 INVSQ9Y283 1065 aa9.41□□□□□ -0.9
RAB11FIP4-202ENST00000578148 PKD1L2Q7Z442 2459 aa9.4□□□□□ -0.9
RAB11FIP4-202ENST00000578148 PATE3B3GLJ2 98 aa9.4□□□□□ -0.9
RAB11FIP4-202ENST00000578148 TNFRSF10BO14763 440 aa9.4□□□□□ -0.9
RAB11FIP4-202ENST00000578148 POLR2DO15514 142 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms