RNA–Protein interactions for RNA: ENST00000577721.5

SMARCE1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-212ENST00000577721 PIGRP01833 764 aa7.36□□□□□ -1.23
SMARCE1-212ENST00000577721 HDCP19113 662 aa7.36□□□□□ -1.23
SMARCE1-212ENST00000577721 CSRP1P21291 193 aaKnown RBP7.36□□□□□ -1.23
SMARCE1-212ENST00000577721 SCP2P22307 547 aa7.36□□□□□ -1.23
SMARCE1-212ENST00000577721 CYP2F1P24903 491 aa7.36□□□□□ -1.23
SMARCE1-212ENST00000577721 UBA7P41226 1012 aa7.36□□□□□ -1.23
SMARCE1-212ENST00000577721 MAPK8P45983 427 aa7.36□□□□□ -1.23
SMARCE1-212ENST00000577721 ATXN3P54252 364 aaPredicted RBP7.36□□□□□ -1.23
SMARCE1-212ENST00000577721 TFAMQ00059 246 aaKnown RBP7.36□□□□□ -1.23
SMARCE1-212ENST00000577721 MYL7Q01449 175 aa7.36□□□□□ -1.23
SMARCE1-212ENST00000577721 LMAN2Q12907 356 aa7.36□□□□□ -1.23
SMARCE1-212ENST00000577721 KCNB1Q14721 858 aa7.36□□□□□ -1.23
SMARCE1-212ENST00000577721 HYIQ5T013 277 aa7.36□□□□□ -1.23
SMARCE1-212ENST00000577721 PMS2CLQ68D20 193 aa7.36□□□□□ -1.23
SMARCE1-212ENST00000577721 ARMCX6Q7L4S7 300 aa7.36□□□□□ -1.23
SMARCE1-212ENST00000577721 LPCAT2Q7L5N7 544 aa7.36□□□□□ -1.23
SMARCE1-212ENST00000577721 SPATA2LQ8IUW3 424 aaPredicted RBP7.36□□□□□ -1.23
SMARCE1-212ENST00000577721 EFCAB13Q8IY85 973 aa7.36□□□□□ -1.23
SMARCE1-212ENST00000577721 ARL14EPQ8N8R7 260 aaPredicted RBP7.36□□□□□ -1.23
SMARCE1-212ENST00000577721 RIN3Q8TB24 985 aa7.36□□□□□ -1.23
SMARCE1-212ENST00000577721 SH3RF2Q8TEC5 729 aa7.36□□□□□ -1.23
SMARCE1-212ENST00000577721 USP33Q8TEY7 942 aa7.36□□□□□ -1.23
SMARCE1-212ENST00000577721 NOC3LQ8WTT2 800 aaKnown RBP7.36□□□□□ -1.23
SMARCE1-212ENST00000577721 RLN3Q8WXF3 142 aa7.36□□□□□ -1.23
SMARCE1-212ENST00000577721 ZCCHC14Q8WYQ9 949 aaKnown RBP7.36□□□□□ -1.23
SMARCE1-212ENST00000577721 POMGNT1Q8WZA1 660 aa7.36□□□□□ -1.23
SMARCE1-212ENST00000577721 ZNF560Q96MR9 790 aa7.36□□□□□ -1.23
SMARCE1-212ENST00000577721 REEP2Q9BRK0 252 aa7.36□□□□□ -1.23
SMARCE1-212ENST00000577721 NUSAP1Q9BXS6 441 aaKnown RBP7.36□□□□□ -1.23
SMARCE1-212ENST00000577721 LINC00597Q9H2U6 94 aa7.36□□□□□ -1.23
SMARCE1-212ENST00000577721 DDX43Q9NXZ2 648 aaKnown RBP7.36□□□□□ -1.23
SMARCE1-212ENST00000577721 BCCIPQ9P287 314 aaKnown RBP eCLIP7.36□□□□□ -1.23
SMARCE1-212ENST00000577721 GTF3C4Q9UKN8 822 aa7.36□□□□□ -1.23
SMARCE1-212ENST00000577721 AGO2Q9UKV8 859 aaKnown RBP7.36□□□□□ -1.23
SMARCE1-212ENST00000577721 AGAP1Q9UPQ3 857 aa7.36□□□□□ -1.23
SMARCE1-212ENST00000577721 R3HCC1Q9Y3T6 440 aaKnown RBP7.36□□□□□ -1.23
SMARCE1-212ENST00000577721 C2CD2Q9Y426 696 aa7.36□□□□□ -1.23
SMARCE1-212ENST00000577721 TICRRQ7Z2Z1 1910 aa7.36□□□□□ -1.23
SMARCE1-212ENST00000577721 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.35□□□□□ -1.23
SMARCE1-212ENST00000577721 SRRM3A6NNA2 597 aaPredicted RBP7.35□□□□□ -1.23
SMARCE1-212ENST00000577721 CDX4O14627 284 aaPredicted RBP7.35□□□□□ -1.23
SMARCE1-212ENST00000577721 FAM189A1O60320 539 aa7.35□□□□□ -1.23
SMARCE1-212ENST00000577721 NFATC1O95644 943 aa7.35□□□□□ -1.23
SMARCE1-212ENST00000577721 ABL1P00519 1130 aa7.35□□□□□ -1.23
SMARCE1-212ENST00000577721 KRT19P08727 400 aa7.35□□□□□ -1.23
SMARCE1-212ENST00000577721 H2AFB1P0C5Y9 115 aa7.35□□□□□ -1.23
SMARCE1-212ENST00000577721 H2AFB2P0C5Z0 115 aa7.35□□□□□ -1.23
SMARCE1-212ENST00000577721 BCKDHBP21953 392 aa7.35□□□□□ -1.23
SMARCE1-212ENST00000577721 ACAT1P24752 427 aaKnown RBP7.35□□□□□ -1.23
SMARCE1-212ENST00000577721 POLR2BP30876 1174 aaKnown RBP7.35□□□□□ -1.23
SMARCE1-212ENST00000577721 ABCD1P33897 745 aa7.35□□□□□ -1.23
SMARCE1-212ENST00000577721 PNPLA4P41247 253 aa7.35□□□□□ -1.23
SMARCE1-212ENST00000577721 ATP2C1P98194 919 aaPredicted RBP7.35□□□□□ -1.23
SMARCE1-212ENST00000577721 MCM6Q14566 821 aa7.35□□□□□ -1.23
SMARCE1-212ENST00000577721 ACAP1Q15027 740 aa7.35□□□□□ -1.23
SMARCE1-212ENST00000577721 POSTNQ15063 836 aa7.35□□□□□ -1.23
SMARCE1-212ENST00000577721 ZNF77Q15935 545 aa7.35□□□□□ -1.23
SMARCE1-212ENST00000577721 EML3Q32P44 896 aa7.35□□□□□ -1.23
SMARCE1-212ENST00000577721 TMEM119Q4V9L6 283 aa7.35□□□□□ -1.23
SMARCE1-212ENST00000577721 ZC2HC1CQ53FD0 456 aaPredicted RBP7.35□□□□□ -1.23
SMARCE1-212ENST00000577721 RILPL1Q5EBL4 403 aa7.35□□□□□ -1.23
SMARCE1-212ENST00000577721 TRIM61Q5EBN2 209 aa7.35□□□□□ -1.23
SMARCE1-212ENST00000577721 SLC39A4Q6P5W5 647 aa7.35□□□□□ -1.23
SMARCE1-212ENST00000577721 TMEFF1Q8IYR6 380 aa7.35□□□□□ -1.23
SMARCE1-212ENST00000577721 PDCL2Q8N4E4 241 aa7.35□□□□□ -1.23
SMARCE1-212ENST00000577721 HDDC3Q8N4P3 179 aa7.35□□□□□ -1.23
SMARCE1-212ENST00000577721 CSGALNACT2Q8N6G5 542 aa7.35□□□□□ -1.23
SMARCE1-212ENST00000577721 LRRC15Q8TF66 581 aa7.35□□□□□ -1.23
SMARCE1-212ENST00000577721 CACTINQ8WUQ7 758 aaKnown RBP7.35□□□□□ -1.23
SMARCE1-212ENST00000577721 EZH1Q92800 747 aaPredicted RBP7.35□□□□□ -1.23
SMARCE1-212ENST00000577721 SPACA7Q96KW9 195 aa7.35□□□□□ -1.23
SMARCE1-212ENST00000577721 SLC22A12Q96S37 553 aa7.35□□□□□ -1.23
SMARCE1-212ENST00000577721 ACBD6Q9BR61 282 aa7.35□□□□□ -1.23
SMARCE1-212ENST00000577721 GTPBP2Q9BX10 602 aaKnown RBP7.35□□□□□ -1.23
SMARCE1-212ENST00000577721 TMEM206Q9H813 350 aa7.35□□□□□ -1.23
SMARCE1-212ENST00000577721 RTN4Q9NQC3 1192 aaKnown RBP7.35□□□□□ -1.23
SMARCE1-212ENST00000577721 NDFIP2Q9NV92 336 aa7.35□□□□□ -1.23
SMARCE1-212ENST00000577721 KIF3AQ9Y496 699 aa7.35□□□□□ -1.23
SMARCE1-212ENST00000577721 SPAARA0A1B0GVQ0 90 aa7.34□□□□□ -1.23
SMARCE1-212ENST00000577721 C2orf78A6NCI8 922 aa7.34□□□□□ -1.23
SMARCE1-212ENST00000577721 TISP43B9A030 160 aa7.34□□□□□ -1.23
SMARCE1-212ENST00000577721 H3BQV1 296 aa7.34□□□□□ -1.23
SMARCE1-212ENST00000577721 K7EQS6 105 aa7.34□□□□□ -1.23
SMARCE1-212ENST00000577721 TADA3O75528 432 aa7.34□□□□□ -1.23
SMARCE1-212ENST00000577721 NOL4O94818 638 aa7.34□□□□□ -1.23
SMARCE1-212ENST00000577721 IL18RAPO95256 599 aa7.34□□□□□ -1.23
SMARCE1-212ENST00000577721 KLF8O95600 359 aaPredicted RBP7.34□□□□□ -1.23
SMARCE1-212ENST00000577721 APODP05090 189 aa7.34□□□□□ -1.23
SMARCE1-212ENST00000577721 ITGB3P05106 788 aa7.34□□□□□ -1.23
SMARCE1-212ENST00000577721 CFIP05156 583 aa7.34□□□□□ -1.23
SMARCE1-212ENST00000577721 PLCG1P19174 1290 aa7.34□□□□□ -1.23
SMARCE1-212ENST00000577721 GRIK1P39086 918 aa7.34□□□□□ -1.23
SMARCE1-212ENST00000577721 LHX1P48742 406 aa7.34□□□□□ -1.23
SMARCE1-212ENST00000577721 PDE6CP51160 858 aa7.34□□□□□ -1.23
SMARCE1-212ENST00000577721 SIM1P81133 766 aaPredicted RBP7.34□□□□□ -1.23
SMARCE1-212ENST00000577721 MRPS21P82921 87 aaKnown RBP7.34□□□□□ -1.23
SMARCE1-212ENST00000577721 GTF2BQ00403 316 aa7.34□□□□□ -1.23
SMARCE1-212ENST00000577721 RING1Q06587 406 aa7.34□□□□□ -1.23
SMARCE1-212ENST00000577721 BYSLQ13895 437 aaKnown RBP7.34□□□□□ -1.23
SMARCE1-212ENST00000577721 CRY1Q16526 586 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms