RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 PPP1R2P3Q6NXS1 205 aa10.77□□□□□ -0.69
SS18-207ENST00000577636 ANKS3Q6ZW76 656 aa10.77□□□□□ -0.69
SS18-207ENST00000577636 PDZD4Q76G19 769 aaPredicted RBP10.77□□□□□ -0.69
SS18-207ENST00000577636 ZNF677Q86XU0 584 aa10.77□□□□□ -0.69
SS18-207ENST00000577636 HS6ST3Q8IZP7 471 aa10.77□□□□□ -0.69
SS18-207ENST00000577636 NETO1Q8TDF5 533 aa10.77□□□□□ -0.69
SS18-207ENST00000577636 DNASE1L2Q92874 299 aa10.77□□□□□ -0.69
SS18-207ENST00000577636 IRF7Q92985 503 aa10.77□□□□□ -0.69
SS18-207ENST00000577636 DDX27Q96GQ7 796 aaKnown RBP10.77□□□□□ -0.69
SS18-207ENST00000577636 ZSWIM3Q96MP5 696 aa10.77□□□□□ -0.69
SS18-207ENST00000577636 WDR24Q96S15 920 aa10.77□□□□□ -0.69
SS18-207ENST00000577636 CHRDQ9H2X0 955 aa10.77□□□□□ -0.69
SS18-207ENST00000577636 ZNF334Q9HCZ1 680 aaPredicted RBP10.77□□□□□ -0.69
SS18-207ENST00000577636 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.77□□□□□ -0.693e-16■■■■■ 317.3
SS18-207ENST00000577636 SEMA4GQ9NTN9 838 aa10.77□□□□□ -0.69
SS18-207ENST00000577636 AJAP1Q9UKB5 411 aaPredicted RBP10.77□□□□□ -0.69
SS18-207ENST00000577636 PIAS3Q9Y6X2 628 aa10.77□□□□□ -0.69
SS18-207ENST00000577636 FRYLO94915 3013 aa10.77□□□□□ -0.69
SS18-207ENST00000577636 CEP250Q9BV73 2442 aa10.77□□□□□ -0.69
SS18-207ENST00000577636 ANO9A1A5B4 782 aa10.76□□□□□ -0.69
SS18-207ENST00000577636 WDR27A2RRH5 827 aa10.76□□□□□ -0.69
SS18-207ENST00000577636 BTNL10A8MVZ5 291 aa10.76□□□□□ -0.69
SS18-207ENST00000577636 SLC30A4O14863 429 aa10.76□□□□□ -0.69
SS18-207ENST00000577636 ZNF263O14978 683 aa10.76□□□□□ -0.69
SS18-207ENST00000577636 HRO43593 1189 aa10.76□□□□□ -0.69
SS18-207ENST00000577636 SEC24AO95486 1093 aa10.76□□□□□ -0.69
SS18-207ENST00000577636 KRT19P08727 400 aa10.76□□□□□ -0.69
SS18-207ENST00000577636 POU2F2P09086 479 aa10.76□□□□□ -0.69
SS18-207ENST00000577636 PNMA6AP0CW24 399 aaPredicted RBP10.76□□□□□ -0.69
SS18-207ENST00000577636 CXCL8P10145 99 aa10.76□□□□□ -0.69
SS18-207ENST00000577636 ATICP31939 592 aa10.76□□□□□ -0.69
SS18-207ENST00000577636 CCR2P41597 374 aa10.76□□□□□ -0.69
SS18-207ENST00000577636 NOP2P46087 812 aaKnown RBP10.76□□□□□ -0.69
SS18-207ENST00000577636 NOP14P78316 857 aaKnown RBP10.76□□□□□ -0.69
SS18-207ENST00000577636 ROR1Q01973 937 aa10.76□□□□□ -0.69
SS18-207ENST00000577636 TMEM132DQ14C87 1099 aa10.76□□□□□ -0.69
SS18-207ENST00000577636 CD300LGQ6UXG3 332 aa10.76□□□□□ -0.69
SS18-207ENST00000577636 VITQ6UXI7 678 aa10.76□□□□□ -0.69
SS18-207ENST00000577636 PRR23CQ6ZRP0 262 aa10.76□□□□□ -0.69
SS18-207ENST00000577636 CEP68Q76N32 757 aa10.76□□□□□ -0.69
SS18-207ENST00000577636 ELMOD1Q8N336 334 aa10.76□□□□□ -0.69
SS18-207ENST00000577636 OR5B17Q8NGF7 314 aa10.76□□□□□ -0.69
SS18-207ENST00000577636 ZNF461Q8TAF7 563 aa10.76□□□□□ -0.69
SS18-207ENST00000577636 TTC8Q8TAM2 541 aa10.76□□□□□ -0.69
SS18-207ENST00000577636 FAXDC2Q96IV6 333 aa10.76□□□□□ -0.69
SS18-207ENST00000577636 ZNF512Q96ME7 567 aaPredicted RBP10.76□□□□□ -0.69
SS18-207ENST00000577636 TSPAN18Q96SJ8 248 aa10.76□□□□□ -0.69
SS18-207ENST00000577636 PI4K2AQ9BTU6 479 aa10.76□□□□□ -0.69
SS18-207ENST00000577636 MTMR12Q9C0I1 747 aa10.76□□□□□ -0.69
SS18-207ENST00000577636 GPR88Q9GZN0 384 aa10.76□□□□□ -0.69
SS18-207ENST00000577636 DNAI2Q9GZS0 605 aa10.76□□□□□ -0.69
SS18-207ENST00000577636 NIF3L1Q9GZT8 377 aa10.76□□□□□ -0.69
SS18-207ENST00000577636 LACRTQ9GZZ8 138 aa10.76□□□□□ -0.69
SS18-207ENST00000577636 SLITRK6Q9H5Y7 841 aa10.76□□□□□ -0.69
SS18-207ENST00000577636 PLEKHA5Q9HAU0 1116 aa10.76□□□□□ -0.69
SS18-207ENST00000577636 RBM12Q9NTZ6 932 aaKnown RBP10.76□□□□□ -0.69
SS18-207ENST00000577636 RALYQ9UKM9 306 aaKnown RBP10.76□□□□□ -0.69
SS18-207ENST00000577636 DERAQ9Y315 318 aa10.76□□□□□ -0.69
SS18-207ENST00000577636 JRKLQ9Y4A0 524 aa10.76□□□□□ -0.69
SS18-207ENST00000577636 PCDHB4Q9Y5E5 795 aa10.76□□□□□ -0.69
SS18-207ENST00000577636 BACE2Q9Y5Z0 518 aa10.76□□□□□ -0.69
SS18-207ENST00000577636 WDR87Q6ZQQ6 2873 aa10.76□□□□□ -0.69
SS18-207ENST00000577636 SPTBN2O15020 2390 aa10.75□□□□□ -0.69
SS18-207ENST00000577636 LACTBL1A8MY62 500 aa10.75□□□□□ -0.69
SS18-207ENST00000577636 DDX3XO00571 662 aaKnown RBP eCLIP10.75□□□□□ -0.691e-15■■■□□ 17.7
SS18-207ENST00000577636 AXIN1O15169 862 aa10.75□□□□□ -0.69
SS18-207ENST00000577636 CYP26A1O43174 497 aa10.75□□□□□ -0.69
SS18-207ENST00000577636 XPOTO43592 962 aaKnown RBP10.75□□□□□ -0.69
SS18-207ENST00000577636 ABCB7O75027 752 aa10.75□□□□□ -0.69
SS18-207ENST00000577636 VNN1O95497 513 aa10.75□□□□□ -0.69
SS18-207ENST00000577636 ASS1P00966 412 aaKnown RBP10.75□□□□□ -0.69
SS18-207ENST00000577636 TDGF1P13385 188 aa10.75□□□□□ -0.69
SS18-207ENST00000577636 CYP11B1P15538 503 aa10.75□□□□□ -0.69
SS18-207ENST00000577636 PSMC3P17980 439 aa10.75□□□□□ -0.69
SS18-207ENST00000577636 FCARP24071 287 aa10.75□□□□□ -0.69
SS18-207ENST00000577636 KPNA1P52294 538 aaPredicted RBP10.75□□□□□ -0.69
SS18-207ENST00000577636 CDR2Q01850 454 aa10.75□□□□□ -0.69
SS18-207ENST00000577636 MYO1EQ12965 1108 aa10.75□□□□□ -0.69
SS18-207ENST00000577636 CCDC6Q16204 474 aa10.75□□□□□ -0.69
SS18-207ENST00000577636 UPP1Q16831 310 aa10.75□□□□□ -0.69
SS18-207ENST00000577636 ZNF667Q5HYK9 610 aa10.75□□□□□ -0.69
SS18-207ENST00000577636 PRSS36Q5K4E3 855 aa10.75□□□□□ -0.69
SS18-207ENST00000577636 IL31Q6EBC2 164 aa10.75□□□□□ -0.69
SS18-207ENST00000577636 RTL10Q7L3V2 364 aa10.75□□□□□ -0.69
SS18-207ENST00000577636 YAF2Q8IY57 180 aa10.75□□□□□ -0.69
SS18-207ENST00000577636 SYCE1Q8N0S2 351 aa10.75□□□□□ -0.69
SS18-207ENST00000577636 TTC39CQ8N584 583 aa10.75□□□□□ -0.69
SS18-207ENST00000577636 CEP112Q8N8E3 955 aa10.75□□□□□ -0.69
SS18-207ENST00000577636 C3orf58Q8NDZ4 430 aa10.75□□□□□ -0.69
SS18-207ENST00000577636 CSGALNACT1Q8TDX6 532 aa10.75□□□□□ -0.69
SS18-207ENST00000577636 KAT5Q92993 513 aa10.75□□□□□ -0.69
SS18-207ENST00000577636 TATDN2Q93075 761 aa10.75□□□□□ -0.69
SS18-207ENST00000577636 KREMEN1Q96MU8 473 aa10.75□□□□□ -0.69
SS18-207ENST00000577636 ASB16Q96NS5 453 aa10.75□□□□□ -0.69
SS18-207ENST00000577636 IRX2Q9BZI1 471 aaPredicted RBP10.75□□□□□ -0.69
SS18-207ENST00000577636 L2HGDHQ9H9P8 463 aa10.75□□□□□ -0.69
SS18-207ENST00000577636 TRIM10Q9UDY6 481 aa10.75□□□□□ -0.69
SS18-207ENST00000577636 ITGA11Q9UKX5 1188 aa10.75□□□□□ -0.69
SS18-207ENST00000577636 C2CD2Q9Y426 696 aa10.75□□□□□ -0.69
SS18-207ENST00000577636 PTPRJQ12913 1337 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms