RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 NCK2O43639 380 aa6.34□□□□□ -1.39
NUP88-213ENST00000576862 EPHA3P29320 983 aa6.34□□□□□ -1.39
NUP88-213ENST00000576862 NEK3P51956 506 aa6.34□□□□□ -1.39
NUP88-213ENST00000576862 E2F1Q01094 437 aa6.34□□□□□ -1.39
NUP88-213ENST00000576862 NHLH1Q02575 133 aa6.34□□□□□ -1.39
NUP88-213ENST00000576862 LONRF1Q17RB8 773 aa6.34□□□□□ -1.39
NUP88-213ENST00000576862 PCID2Q5JVF3 399 aa6.34□□□□□ -1.39
NUP88-213ENST00000576862 MANEALQ5VSG8 457 aa6.34□□□□□ -1.39
NUP88-213ENST00000576862 ZNF384Q8TF68 577 aa6.34□□□□□ -1.39
NUP88-213ENST00000576862 CTHRC1Q96CG8 243 aa6.34□□□□□ -1.39
NUP88-213ENST00000576862 ZC3H10Q96K80 434 aaKnown RBP6.34□□□□□ -1.39
NUP88-213ENST00000576862 MACROD1Q9BQ69 325 aa6.34□□□□□ -1.39
NUP88-213ENST00000576862 SELENOOQ9BVL4 669 aa6.34□□□□□ -1.39
NUP88-213ENST00000576862 MYO1AQ9UBC5 1043 aa6.34□□□□□ -1.39
NUP88-213ENST00000576862 VPS51Q9UID3 782 aa6.34□□□□□ -1.39
NUP88-213ENST00000576862 PHTF1Q9UMS5 762 aa6.34□□□□□ -1.39
NUP88-213ENST00000576862 AOX1Q06278 1338 aa6.33□□□□□ -1.4
NUP88-213ENST00000576862 AP4M1O00189 453 aa6.33□□□□□ -1.4
NUP88-213ENST00000576862 AREL1O15033 823 aa6.33□□□□□ -1.4
NUP88-213ENST00000576862 PMPCBO75439 489 aa6.33□□□□□ -1.4
NUP88-213ENST00000576862 NBPF7P0C2Y1 421 aaPredicted RBP6.33□□□□□ -1.4
NUP88-213ENST00000576862 GKP32189 559 aa6.33□□□□□ -1.4
NUP88-213ENST00000576862 PGDP52209 483 aa6.33□□□□□ -1.4
NUP88-213ENST00000576862 CYP4F2P78329 520 aa6.33□□□□□ -1.4
NUP88-213ENST00000576862 HIBCHQ6NVY1 386 aaPredicted RBP6.33□□□□□ -1.4
NUP88-213ENST00000576862 CEP85Q6P2H3 762 aa6.33□□□□□ -1.4
NUP88-213ENST00000576862 KRT28Q7Z3Y7 464 aa6.33□□□□□ -1.4
NUP88-213ENST00000576862 SMCR8Q8TEV9 937 aaPredicted RBP6.33□□□□□ -1.4
NUP88-213ENST00000576862 DPCDQ9BVM2 203 aaPredicted RBP6.33□□□□□ -1.4
NUP88-213ENST00000576862 STARD7Q9NQZ5 370 aa6.33□□□□□ -1.4
NUP88-213ENST00000576862 CHST12Q9NRB3 414 aa6.33□□□□□ -1.4
NUP88-213ENST00000576862 FNIP2Q9P278 1114 aa6.33□□□□□ -1.4
NUP88-213ENST00000576862 PADI4Q9UM07 663 aa6.33□□□□□ -1.4
NUP88-213ENST00000576862 USP22Q9UPT9 525 aa6.33□□□□□ -1.4
NUP88-213ENST00000576862 WNT6Q9Y6F9 365 aa6.33□□□□□ -1.4
NUP88-213ENST00000576862 TARM1B6A8C7 271 aa6.32□□□□□ -1.4
NUP88-213ENST00000576862 RASA4BC9J798 803 aa6.32□□□□□ -1.4
NUP88-213ENST00000576862 APOL1O14791 398 aa6.32□□□□□ -1.4
NUP88-213ENST00000576862 RASA4O43374 803 aa6.32□□□□□ -1.4
NUP88-213ENST00000576862 PRKCBP05771 671 aa6.32□□□□□ -1.4
NUP88-213ENST00000576862 DLDP09622 509 aaKnown RBP6.32□□□□□ -1.4
NUP88-213ENST00000576862 NPSP0C0P6 89 aa6.32□□□□□ -1.4
NUP88-213ENST00000576862 TNFSF4P23510 183 aa6.32□□□□□ -1.4
NUP88-213ENST00000576862 NTSR1P30989 418 aa6.32□□□□□ -1.4
NUP88-213ENST00000576862 GATMP50440 423 aa6.32□□□□□ -1.4
NUP88-213ENST00000576862 TFF2Q03403 129 aa6.32□□□□□ -1.4
NUP88-213ENST00000576862 FHL3Q13643 280 aa6.32□□□□□ -1.4
NUP88-213ENST00000576862 NAPRTQ6XQN6 538 aa6.32□□□□□ -1.4
NUP88-213ENST00000576862 CATSPERGQ6ZRH7 1159 aa6.32□□□□□ -1.4
NUP88-213ENST00000576862 SLC29A4Q7RTT9 530 aa6.32□□□□□ -1.4
NUP88-213ENST00000576862 DPP9Q86TI2 863 aa6.32□□□□□ -1.4
NUP88-213ENST00000576862 METTL25Q8N6Q8 603 aa6.32□□□□□ -1.4
NUP88-213ENST00000576862 LRRC46Q96FV0 321 aa6.32□□□□□ -1.4
NUP88-213ENST00000576862 ZNF764Q96H86 408 aaPredicted RBP6.32□□□□□ -1.4
NUP88-213ENST00000576862 WDYHV1Q96HA8 205 aa6.32□□□□□ -1.4
NUP88-213ENST00000576862 ZNF668Q96K58 619 aaPredicted RBP6.32□□□□□ -1.4
NUP88-213ENST00000576862 RIPOR3Q96MK2 946 aa6.32□□□□□ -1.4
NUP88-213ENST00000576862 INO80BQ9C086 356 aaPredicted RBP6.32□□□□□ -1.4
NUP88-213ENST00000576862 CCNL1Q9UK58 526 aaPredicted RBP6.32□□□□□ -1.4
NUP88-213ENST00000576862 RIMKLBQ9ULI2 386 aa6.32□□□□□ -1.4
NUP88-213ENST00000576862 HPSEQ9Y251 543 aa6.32□□□□□ -1.4
NUP88-213ENST00000576862 SPRY2O43597 315 aa6.31□□□□□ -1.4
NUP88-213ENST00000576862 PDE8BO95263 885 aa6.31□□□□□ -1.4
NUP88-213ENST00000576862 NHLRC4P0CG21 123 aaPredicted RBP6.31□□□□□ -1.4
NUP88-213ENST00000576862 FPR3P25089 353 aa6.31□□□□□ -1.4
NUP88-213ENST00000576862 PSG6Q00889 435 aa6.31□□□□□ -1.4
NUP88-213ENST00000576862 PICALMQ13492 652 aa6.31□□□□□ -1.4
NUP88-213ENST00000576862 PMS2P11Q13670 270 aa6.31□□□□□ -1.4
NUP88-213ENST00000576862 TBC1D25Q3MII6 688 aa6.31□□□□□ -1.4
NUP88-213ENST00000576862 RNASE12Q5GAN4 147 aaKnown RBP6.31□□□□□ -1.4
NUP88-213ENST00000576862 FAM209BQ5JX69 171 aa6.31□□□□□ -1.4
NUP88-213ENST00000576862 L1TD1Q5T7N2 865 aaKnown RBP6.31□□□□□ -1.4
NUP88-213ENST00000576862 ZNF788Q6ZQV5 615 aa6.31□□□□□ -1.4
NUP88-213ENST00000576862 USP49Q70CQ1 688 aa6.31□□□□□ -1.4
NUP88-213ENST00000576862 ZNF804AQ7Z570 1209 aa6.31□□□□□ -1.4
NUP88-213ENST00000576862 FANCBQ8NB91 859 aa6.31□□□□□ -1.4
NUP88-213ENST00000576862 ABHD11Q8NFV4 315 aa6.31□□□□□ -1.4
NUP88-213ENST00000576862 NELL1Q92832 810 aa6.31□□□□□ -1.4
NUP88-213ENST00000576862 FAM227BQ96M60 508 aa6.31□□□□□ -1.4
NUP88-213ENST00000576862 GDF15Q99988 308 aa6.31□□□□□ -1.4
NUP88-213ENST00000576862 HEYLQ9NQ87 328 aaPredicted RBP6.31□□□□□ -1.4
NUP88-213ENST00000576862 DNAJB11Q9UBS4 358 aa6.31□□□□□ -1.4
NUP88-213ENST00000576862 WIPF3A6NGB9 483 aa6.3□□□□□ -1.4
NUP88-213ENST00000576862 PSMD9O00233 223 aa6.3□□□□□ -1.4
NUP88-213ENST00000576862 EXOC5O00471 708 aa6.3□□□□□ -1.4
NUP88-213ENST00000576862 KCNQ3O43525 872 aa6.3□□□□□ -1.4
NUP88-213ENST00000576862 PPFIA2O75334 1257 aa6.3□□□□□ -1.4
NUP88-213ENST00000576862 FGF18O76093 207 aa6.3□□□□□ -1.4
NUP88-213ENST00000576862 JTBO76095 146 aa6.3□□□□□ -1.4
NUP88-213ENST00000576862 AK2P54819 239 aa6.3□□□□□ -1.4
NUP88-213ENST00000576862 FCRLBQ6BAA4 426 aa6.3□□□□□ -1.4
NUP88-213ENST00000576862 MTHFD1LQ6UB35 978 aa6.3□□□□□ -1.4
NUP88-213ENST00000576862 KIAA0408Q6ZU52 694 aa6.3□□□□□ -1.4
NUP88-213ENST00000576862 OR2C3Q8N628 320 aa6.3□□□□□ -1.4
NUP88-213ENST00000576862 C11orf44Q8N8P7 122 aa6.3□□□□□ -1.4
NUP88-213ENST00000576862 ZDHHC12Q96GR4 267 aa6.3□□□□□ -1.4
NUP88-213ENST00000576862 HIST1H2AAQ96QV6 131 aa6.3□□□□□ -1.4
NUP88-213ENST00000576862 PTGFRNQ9P2B2 879 aa6.3□□□□□ -1.4
NUP88-213ENST00000576862 LPAR3Q9UBY5 353 aa6.3□□□□□ -1.4
NUP88-213ENST00000576862 M0R3H8 397 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms