RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 FAM71AQ8IYT1 594 aa13.57□□□□□ -0.24
PCDHGB3-201ENST00000576222 ULK2Q8IYT8 1036 aa13.57□□□□□ -0.24
PCDHGB3-201ENST00000576222 GALNT15Q8N3T1 639 aa13.57□□□□□ -0.24
PCDHGB3-201ENST00000576222 SPOCK2Q92563 424 aa13.57□□□□□ -0.24
PCDHGB3-201ENST00000576222 SGF29Q96ES7 293 aa13.57□□□□□ -0.24
PCDHGB3-201ENST00000576222 ZNF317Q96PQ6 595 aaPredicted RBP13.57□□□□□ -0.24
PCDHGB3-201ENST00000576222 KCNMB3Q9NPA1 279 aa13.57□□□□□ -0.24
PCDHGB3-201ENST00000576222 SLC5A4Q9NY91 659 aa13.57□□□□□ -0.24
PCDHGB3-201ENST00000576222 AP3B1O00203 1094 aa13.57□□□□□ -0.24
PCDHGB3-201ENST00000576222 TBC1D4O60343 1298 aa13.57□□□□□ -0.24
PCDHGB3-201ENST00000576222 PIAS1O75925 651 aa13.57□□□□□ -0.24
PCDHGB3-201ENST00000576222 NR3C2P08235 984 aa13.57□□□□□ -0.24
PCDHGB3-201ENST00000576222 VAV1P15498 845 aa13.57□□□□□ -0.24
PCDHGB3-201ENST00000576222 RPS6KA3P51812 740 aa13.57□□□□□ -0.24
PCDHGB3-201ENST00000576222 KRT27Q7Z3Y8 459 aa13.57□□□□□ -0.24
PCDHGB3-201ENST00000576222 PLD3Q8IV08 490 aa13.57□□□□□ -0.24
PCDHGB3-201ENST00000576222 TMCO5AQ8N6Q1 288 aa13.57□□□□□ -0.24
PCDHGB3-201ENST00000576222 STKLD1Q8NE28 680 aa13.57□□□□□ -0.24
PCDHGB3-201ENST00000576222 ZNF606Q8WXB4 792 aa13.57□□□□□ -0.24
PCDHGB3-201ENST00000576222 USP6NLQ92738 828 aa13.57□□□□□ -0.24
PCDHGB3-201ENST00000576222 CDRT15Q96T59 188 aa13.57□□□□□ -0.24
PCDHGB3-201ENST00000576222 USP18Q9UMW8 372 aa13.57□□□□□ -0.24
PCDHGB3-201ENST00000576222 LSM8O95777 96 aaKnown RBP13.57□□□□□ -0.24
PCDHGB3-201ENST00000576222 PSMA4P25789 261 aaKnown RBP13.57□□□□□ -0.24
PCDHGB3-201ENST00000576222 POLD1P28340 1107 aa13.57□□□□□ -0.24
PCDHGB3-201ENST00000576222 ALDH1A3P47895 512 aa13.57□□□□□ -0.24
PCDHGB3-201ENST00000576222 EVX2Q03828 476 aa13.57□□□□□ -0.24
PCDHGB3-201ENST00000576222 BAATQ14032 418 aaPredicted RBP13.57□□□□□ -0.24
PCDHGB3-201ENST00000576222 C1orf186Q6ZWK4 172 aa13.57□□□□□ -0.24
PCDHGB3-201ENST00000576222 SH3TC2Q8TF17 1288 aa13.57□□□□□ -0.24
PCDHGB3-201ENST00000576222 CASP10Q92851 521 aa13.57□□□□□ -0.24
PCDHGB3-201ENST00000576222 MASTLQ96GX5 879 aa13.57□□□□□ -0.24
PCDHGB3-201ENST00000576222 WNK4Q96J92 1243 aa13.57□□□□□ -0.24
PCDHGB3-201ENST00000576222 ELMO2Q96JJ3 720 aa13.57□□□□□ -0.24
PCDHGB3-201ENST00000576222 COPS7BQ9H9Q2 264 aaPredicted RBP13.57□□□□□ -0.24
PCDHGB3-201ENST00000576222 MYRFQ9Y2G1 1151 aa13.57□□□□□ -0.24
PCDHGB3-201ENST00000576222 RPTORQ8N122 1335 aa13.57□□□□□ -0.24
PCDHGB3-201ENST00000576222 LIASO43766 372 aa13.56□□□□□ -0.24
PCDHGB3-201ENST00000576222 FGRP09769 529 aa13.56□□□□□ -0.24
PCDHGB3-201ENST00000576222 GFAPP14136 432 aa13.56□□□□□ -0.24
PCDHGB3-201ENST00000576222 FMO1Q01740 532 aa13.56□□□□□ -0.24
PCDHGB3-201ENST00000576222 NPY5RQ15761 445 aa13.56□□□□□ -0.24
PCDHGB3-201ENST00000576222 SLC5A9Q2M3M2 681 aa13.56□□□□□ -0.24
PCDHGB3-201ENST00000576222 KHDC1Q4VXA5 237 aaKnown RBP13.56□□□□□ -0.24
PCDHGB3-201ENST00000576222 LIN52Q52LA3 116 aa13.56□□□□□ -0.24
PCDHGB3-201ENST00000576222 SEZ6Q53EL9 994 aa13.56□□□□□ -0.24
PCDHGB3-201ENST00000576222 TTC27Q6P3X3 843 aa13.56□□□□□ -0.24
PCDHGB3-201ENST00000576222 TDRD5Q8NAT2 981 aaKnown RBP13.56□□□□□ -0.24
PCDHGB3-201ENST00000576222 FLAD1Q8NFF5 587 aa13.56□□□□□ -0.24
PCDHGB3-201ENST00000576222 KLHL25Q9H0H3 589 aa13.56□□□□□ -0.24
PCDHGB3-201ENST00000576222 NSMCE4AQ9NXX6 385 aa13.56□□□□□ -0.24
PCDHGB3-201ENST00000576222 HNRNPRO43390 633 aaKnown RBP13.56□□□□□ -0.24
PCDHGB3-201ENST00000576222 HUS1O60921 280 aa13.56□□□□□ -0.24
PCDHGB3-201ENST00000576222 H2AFYO75367 372 aaKnown RBP13.56□□□□□ -0.24
PCDHGB3-201ENST00000576222 ME2P23368 584 aa13.56□□□□□ -0.24
PCDHGB3-201ENST00000576222 PTGER2P43116 358 aa13.56□□□□□ -0.24
PCDHGB3-201ENST00000576222 MRPS22P82650 360 aaKnown RBP13.56□□□□□ -0.24
PCDHGB3-201ENST00000576222 ATP1A4Q13733 1029 aa13.56□□□□□ -0.24
PCDHGB3-201ENST00000576222 AASDHQ4L235 1098 aaPredicted RBP13.56□□□□□ -0.24
PCDHGB3-201ENST00000576222 CATSPER4Q7RTX7 472 aa13.56□□□□□ -0.24
PCDHGB3-201ENST00000576222 SLFN11Q7Z7L1 901 aa13.56□□□□□ -0.24
PCDHGB3-201ENST00000576222 ZSWIM2Q8NEG5 633 aa13.56□□□□□ -0.24
PCDHGB3-201ENST00000576222 BEST2Q8NFU1 509 aa13.56□□□□□ -0.24
PCDHGB3-201ENST00000576222 PIWIL2Q8TC59 973 aaKnown RBP13.56□□□□□ -0.24
PCDHGB3-201ENST00000576222 LENG1Q96BZ8 264 aaPredicted RBP13.56□□□□□ -0.24
PCDHGB3-201ENST00000576222 DRG1Q9Y295 367 aaKnown RBP13.56□□□□□ -0.24
PCDHGB3-201ENST00000576222 TCRBV7S2A1N4TA0A589 114 aa13.56□□□□□ -0.24
PCDHGB3-201ENST00000576222 TISP43B9A030 160 aa13.56□□□□□ -0.24
PCDHGB3-201ENST00000576222 LYNP07948 512 aa13.56□□□□□ -0.24
PCDHGB3-201ENST00000576222 STAT5BP51692 787 aa13.56□□□□□ -0.24
PCDHGB3-201ENST00000576222 TPI1P60174 286 aa13.56□□□□□ -0.24
PCDHGB3-201ENST00000576222 RBM44Q6ZP01 1051 aaKnown RBP13.56□□□□□ -0.24
PCDHGB3-201ENST00000576222 DENND5BQ6ZUT9 1274 aa13.56□□□□□ -0.24
PCDHGB3-201ENST00000576222 TERB1Q8NA31 727 aa13.56□□□□□ -0.24
PCDHGB3-201ENST00000576222 SPIRE2Q8WWL2 714 aa13.56□□□□□ -0.24
PCDHGB3-201ENST00000576222 DGCR14Q96DF8 476 aaKnown RBP13.56□□□□□ -0.24
PCDHGB3-201ENST00000576222 KIF12Q96FN5 646 aa13.56□□□□□ -0.24
PCDHGB3-201ENST00000576222 CCDC28BQ9BUN5 200 aa13.56□□□□□ -0.24
PCDHGB3-201ENST00000576222 NID2Q14112 1375 aa13.56□□□□□ -0.24
PCDHGB3-201ENST00000576222 CAPRIN1Q14444 709 aaKnown RBP13.56□□□□□ -0.24
PCDHGB3-201ENST00000576222 SLC1A5Q15758 541 aa13.56□□□□□ -0.24
PCDHGB3-201ENST00000576222 RNF139Q8WU17 664 aa13.56□□□□□ -0.24
PCDHGB3-201ENST00000576222 TFB1MQ8WVM0 346 aaKnown RBP13.56□□□□□ -0.24
PCDHGB3-201ENST00000576222 AGBL1Q96MI9 1066 aa13.56□□□□□ -0.24
PCDHGB3-201ENST00000576222 PHACTR1Q9C0D0 580 aa13.56□□□□□ -0.24
PCDHGB3-201ENST00000576222 GALNT8Q9NY28 637 aa13.56□□□□□ -0.24
PCDHGB3-201ENST00000576222 GRHL1Q9NZI5 618 aa13.56□□□□□ -0.24
PCDHGB3-201ENST00000576222 CPSF3Q9UKF6 684 aaKnown RBP13.56□□□□□ -0.24
PCDHGB3-201ENST00000576222 ALOX15BO15296 676 aa13.55□□□□□ -0.24
PCDHGB3-201ENST00000576222 ARHGEF9O43307 516 aa13.55□□□□□ -0.24
PCDHGB3-201ENST00000576222 TGM2P21980 687 aa13.55□□□□□ -0.24
PCDHGB3-201ENST00000576222 RARRES1P49788 294 aa13.55□□□□□ -0.24
PCDHGB3-201ENST00000576222 PDK2Q15119 407 aa13.55□□□□□ -0.24
PCDHGB3-201ENST00000576222 TKFCQ3LXA3 575 aa13.55□□□□□ -0.24
PCDHGB3-201ENST00000576222 AAGABQ6PD74 315 aa13.55□□□□□ -0.24
PCDHGB3-201ENST00000576222 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.55□□□□□ -0.24
PCDHGB3-201ENST00000576222 CROCCP3Q8IVE0 287 aa13.55□□□□□ -0.24
PCDHGB3-201ENST00000576222 RFWD2Q8NHY2 731 aa13.55□□□□□ -0.24
PCDHGB3-201ENST00000576222 NKX2-3Q8TAU0 364 aa13.55□□□□□ -0.24
PCDHGB3-201ENST00000576222 ACSS3Q9H6R3 686 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms