RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 TCN1P20061 433 aaPredicted RBP15.12■□□□□ 0.01
SCARF1-209ENST00000576012 PSMA2P25787 234 aa15.12■□□□□ 0.01
SCARF1-209ENST00000576012 RAP1GDS1P52306 607 aa15.12■□□□□ 0.01
SCARF1-209ENST00000576012 EIF3EP60228 445 aaKnown RBP15.12■□□□□ 0.01
SCARF1-209ENST00000576012 PABPC1LQ4VXU2 614 aaKnown RBP15.12■□□□□ 0.01
SCARF1-209ENST00000576012 PDSS2Q86YH6 399 aa15.12■□□□□ 0.01
SCARF1-209ENST00000576012 UNC5BQ8IZJ1 945 aa15.12■□□□□ 0.01
SCARF1-209ENST00000576012 ABRAQ8N0Z2 381 aa15.12■□□□□ 0.01
SCARF1-209ENST00000576012 TMEM130Q8N3G9 435 aa15.12■□□□□ 0.01
SCARF1-209ENST00000576012 FAF2Q96CS3 445 aa15.12■□□□□ 0.01
SCARF1-209ENST00000576012 ERLEC1Q96DZ1 483 aa15.12■□□□□ 0.01
SCARF1-209ENST00000576012 FAM210AQ96ND0 272 aa15.12■□□□□ 0.01
SCARF1-209ENST00000576012 RAB6BQ9NRW1 208 aa15.12■□□□□ 0.01
SCARF1-209ENST00000576012 SLC9A2Q9UBY0 812 aa15.12■□□□□ 0.01
SCARF1-209ENST00000576012 IP6K2Q9UHH9 426 aa15.12■□□□□ 0.01
SCARF1-209ENST00000576012 ZNRF3Q9ULT6 936 aa15.12■□□□□ 0.01
SCARF1-209ENST00000576012 DNAJC16Q9Y2G8 782 aa15.12■□□□□ 0.01
SCARF1-209ENST00000576012 NFIBO00712 420 aa15.12■□□□□ 0.01
SCARF1-209ENST00000576012 SUPT3HO75486 399 aa15.12■□□□□ 0.01
SCARF1-209ENST00000576012 UQCRBP14927 111 aa15.12■□□□□ 0.01
SCARF1-209ENST00000576012 NLRP11P59045 1033 aaKnown RBP15.12■□□□□ 0.01
SCARF1-209ENST00000576012 GTF2BQ00403 316 aa15.12■□□□□ 0.01
SCARF1-209ENST00000576012 TDRD10Q5VZ19 366 aaKnown RBP15.12■□□□□ 0.01
SCARF1-209ENST00000576012 DPY19L2Q6NUT2 758 aa15.12■□□□□ 0.01
SCARF1-209ENST00000576012 ICA1LQ8NDH6 482 aa15.12■□□□□ 0.01
SCARF1-209ENST00000576012 TMEM161BQ8NDZ6 487 aa15.12■□□□□ 0.01
SCARF1-209ENST00000576012 FAM172AQ8WUF8 416 aa15.12■□□□□ 0.01
SCARF1-209ENST00000576012 LENG1Q96BZ8 264 aaPredicted RBP15.12■□□□□ 0.01
SCARF1-209ENST00000576012 CEP170P1Q96L14 293 aa15.12■□□□□ 0.01
SCARF1-209ENST00000576012 STK32BQ9NY57 414 aa15.12■□□□□ 0.01
SCARF1-209ENST00000576012 IL1RAPL1Q9NZN1 696 aa15.12■□□□□ 0.01
SCARF1-209ENST00000576012 PLA2G4CQ9UP65 541 aa15.12■□□□□ 0.01
SCARF1-209ENST00000576012 HEY1Q9Y5J3 304 aa15.12■□□□□ 0.01
SCARF1-209ENST00000576012 NR2E3Q9Y5X4 410 aa15.12■□□□□ 0.01
SCARF1-209ENST00000576012 CAPN14A8MX76 684 aa15.11■□□□□ 0.01
SCARF1-209ENST00000576012 H7C0C1 242 aa15.11■□□□□ 0.01
SCARF1-209ENST00000576012 MAGEC1O60732 1142 aa15.11■□□□□ 0.01
SCARF1-209ENST00000576012 CLPTM1O96005 669 aa15.11■□□□□ 0.01
SCARF1-209ENST00000576012 IL1R2P27930 398 aa15.11■□□□□ 0.01
SCARF1-209ENST00000576012 CDKN2BP42772 138 aa15.11■□□□□ 0.01
SCARF1-209ENST00000576012 ATP5OP48047 213 aa15.11■□□□□ 0.01
SCARF1-209ENST00000576012 CDO1Q16878 200 aa15.11■□□□□ 0.01
SCARF1-209ENST00000576012 LCA5Q86VQ0 697 aa15.11■□□□□ 0.01
SCARF1-209ENST00000576012 SPATA18Q8TC71 538 aa15.11■□□□□ 0.01
SCARF1-209ENST00000576012 ATXN7L3BQ96GX2 97 aa15.11■□□□□ 0.01
SCARF1-209ENST00000576012 CLMNQ96JQ2 1002 aa15.11■□□□□ 0.01
SCARF1-209ENST00000576012 COL20A1Q9P218 1284 aa15.11■□□□□ 0.01
SCARF1-209ENST00000576012 HSFX1Q9UBD0 423 aa15.11■□□□□ 0.01
SCARF1-209ENST00000576012 SOX13Q9UN79 622 aa15.11■□□□□ 0.01
SCARF1-209ENST00000576012 MAGED2Q9UNF1 606 aaPredicted RBP15.11■□□□□ 0.01
SCARF1-209ENST00000576012 APRTP07741 180 aa15.11■□□□□ 0.01
SCARF1-209ENST00000576012 FUT4P22083 530 aa15.11■□□□□ 0.01
SCARF1-209ENST00000576012 RFC1P35251 1148 aaPredicted RBP15.11■□□□□ 0.01
SCARF1-209ENST00000576012 SLC18A1P54219 525 aa15.11■□□□□ 0.01
SCARF1-209ENST00000576012 DGKZQ13574 1117 aa15.11■□□□□ 0.01
SCARF1-209ENST00000576012 ACBD5Q5T8D3 534 aaPredicted RBP15.11■□□□□ 0.01
SCARF1-209ENST00000576012 CIAPIN1Q6FI81 312 aa15.11■□□□□ 0.01
SCARF1-209ENST00000576012 ACAD11Q709F0 780 aa15.11■□□□□ 0.01
SCARF1-209ENST00000576012 MAP7D3Q8IWC1 876 aa15.11■□□□□ 0.01
SCARF1-209ENST00000576012 KCTD6Q8NC69 237 aa15.11■□□□□ 0.01
SCARF1-209ENST00000576012 ZNF606Q8WXB4 792 aa15.11■□□□□ 0.01
SCARF1-209ENST00000576012 PGBD4Q96DM1 585 aa15.11■□□□□ 0.01
SCARF1-209ENST00000576012 TRIM11Q96F44 468 aa15.11■□□□□ 0.01
SCARF1-209ENST00000576012 CSRNP1Q96S65 589 aa15.11■□□□□ 0.01
SCARF1-209ENST00000576012 FOXP3Q9BZS1 431 aa15.11■□□□□ 0.01
SCARF1-209ENST00000576012 FAM198AQ9UFP1 575 aa15.11■□□□□ 0.01
SCARF1-209ENST00000576012 SNCAIPQ9Y6H5 919 aa15.11■□□□□ 0.01
SCARF1-209ENST00000576012 CLRN2A0PK11 232 aa15.11■□□□□ 0.01
SCARF1-209ENST00000576012 TCP10L2B9ZVM9 353 aa15.11■□□□□ 0.01
SCARF1-209ENST00000576012 PCSK6P29122 969 aa15.11■□□□□ 0.01
SCARF1-209ENST00000576012 LIG4P49917 911 aa15.11■□□□□ 0.01
SCARF1-209ENST00000576012 STX3Q13277 289 aa15.11■□□□□ 0.01
SCARF1-209ENST00000576012 PDK1Q15118 436 aa15.11■□□□□ 0.01
SCARF1-209ENST00000576012 NADK2Q4G0N4 442 aa15.11■□□□□ 0.01
SCARF1-209ENST00000576012 TMEM179Q6ZVK1 233 aa15.11■□□□□ 0.01
SCARF1-209ENST00000576012 PTAR1Q7Z6K3 402 aaPredicted RBP15.11■□□□□ 0.01
SCARF1-209ENST00000576012 NAT8LQ8N9F0 302 aa15.11■□□□□ 0.01
SCARF1-209ENST00000576012 DTNBP1Q96EV8 351 aa15.11■□□□□ 0.01
SCARF1-209ENST00000576012 HSPBAP1Q96EW2 488 aa15.11■□□□□ 0.01
SCARF1-209ENST00000576012 ZNF668Q96K58 619 aaPredicted RBP15.11■□□□□ 0.01
SCARF1-209ENST00000576012 DDX43Q9NXZ2 648 aaKnown RBP15.11■□□□□ 0.01
SCARF1-209ENST00000576012 NUB1Q9Y5A7 615 aa15.11■□□□□ 0.01
SCARF1-209ENST00000576012 A0A0B4J269 797 aa15.1■□□□□ 0.01
SCARF1-209ENST00000576012 FOXD2O60548 495 aaPredicted RBP15.1■□□□□ 0.01
SCARF1-209ENST00000576012 CRADDP78560 199 aa15.1■□□□□ 0.01
SCARF1-209ENST00000576012 CCNIQ14094 377 aa15.1■□□□□ 0.01
SCARF1-209ENST00000576012 TRMT10BQ6PF06 316 aaKnown RBP15.1■□□□□ 0.01
SCARF1-209ENST00000576012 HACE1Q8IYU2 909 aa15.1■□□□□ 0.01
SCARF1-209ENST00000576012 GPD1LQ8N335 351 aa15.1■□□□□ 0.01
SCARF1-209ENST00000576012 NETO2Q8NC67 525 aa15.1■□□□□ 0.01
SCARF1-209ENST00000576012 GLIS2Q9BZE0 524 aaPredicted RBP15.1■□□□□ 0.01
SCARF1-209ENST00000576012 PNPOQ9NVS9 261 aa15.1■□□□□ 0.01
SCARF1-209ENST00000576012 EXOC7Q9UPT5 735 aa15.1■□□□□ 0.01
SCARF1-209ENST00000576012 LZTS1Q9Y250 596 aa15.1■□□□□ 0.01
SCARF1-209ENST00000576012 CHN2P52757 468 aa15.1■□□□□ 0.01
SCARF1-209ENST00000576012 TLR1Q15399 786 aa15.1■□□□□ 0.01
SCARF1-209ENST00000576012 DNAL1Q4LDG9 190 aa15.1■□□□□ 0.01
SCARF1-209ENST00000576012 RAB6CQ53S08 254 aa15.1■□□□□ 0.01
SCARF1-209ENST00000576012 TATDN1Q6P1N9 297 aa15.1■□□□□ 0.01
SCARF1-209ENST00000576012 KLHDC10Q6PID8 442 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms