RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 FAM25CB3EWG5 89 aa8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 FAM25GB3EWG6 89 aa8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 H0YJX3 145 aa8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 PSMD11O00231 422 aa8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 TAF4O00268 1085 aa8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 PSMA7O14818 248 aa8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 PLSCR1O15162 318 aa8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 PDPK1O15530 556 aa8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 NDUFA2O43678 99 aa8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 BUB1O43683 1085 aa8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 MYO1DO94832 1006 aa8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 DDX58O95786 925 aaKnown RBP8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 HMGN1P05114 100 aa8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 SRGAP2BP0DMP2 458 aa8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 ITIH1P19827 911 aa8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 MTIF2P46199 727 aaKnown RBP8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 COASYQ13057 564 aa8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 STX3Q13277 289 aa8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 DUSP7Q16829 419 aa8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 PLA2G4EQ3MJ16 856 aa8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 MSS51Q4VC12 460 aa8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 RARS2Q5T160 578 aaKnown RBP8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 IQSEC1Q6DN90 963 aa8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 DESI1Q6ICB0 168 aa8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 TTC27Q6P3X3 843 aa8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 FBXL19Q6PCT2 694 aa8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 SH3BP5LQ7L8J4 393 aa8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 MTDHQ86UE4 582 aaKnown RBP8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 NLRP10Q86W26 655 aa8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 CCDC25Q86WR0 208 aa8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 GRAMD1CQ8IYS0 662 aa8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 KIAA1958Q8N8K9 716 aa8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 TSPAN14Q8NG11 270 aa8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 HELQQ8TDG4 1101 aa8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 BCL7CQ8WUZ0 217 aaPredicted RBP8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 LRRC59Q96AG4 307 aaKnown RBP8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 INTS12Q96CB8 462 aaKnown RBP8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 POM121Q96HA1 1249 aa8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 WNK4Q96J92 1243 aa8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 DOK1Q99704 481 aa8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 METTL22Q9BUU2 404 aaPredicted RBP8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 LRRC2Q9BYS8 371 aa8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 WDR12Q9GZL7 423 aaKnown RBP8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 TP63Q9H3D4 680 aaPredicted RBP8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 LRRC4CQ9HCJ2 640 aa8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 STRN4Q9NRL3 753 aa8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 GDAP2Q9NXN4 497 aa8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 PPM1HQ9ULR3 514 aa8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 CPQQ9Y646 472 aa8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 KDM3AQ9Y4C1 1321 aa8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 ZMYM2Q9UBW7 1377 aa8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 SLIT3O75094 1523 aa8.27□□□□□ -1.09
TOM1L1-220ENST00000575333 PNMA6FA0A0J9YX94 578 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 H3BRJ5 948 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 HOXC11O43248 304 aaPredicted RBP8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 MSI1O43347 362 aaKnown RBP8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 ACSL4O60488 711 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 SNAP91O60641 907 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 DNAJA2O60884 412 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 NOL3O60936 208 aaKnown RBP8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 CDH16O75309 829 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 NTRK1P04629 796 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 JUNDP17535 347 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 IL10P22301 178 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 GSTM2P28161 218 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 HOXA7P31268 230 aaPredicted RBP8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 RPL9P32969 192 aaKnown RBP8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 EVI2BP34910 448 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 RGS7P49802 495 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 SCNN1DP51172 638 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 SELPLGQ14242 412 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 DSC3Q14574 896 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 ACAP2Q15057 778 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 TLR1Q15399 786 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 ZBED5Q49AG3 693 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 SLC9C1Q4G0N8 1177 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 EFHC1Q5JVL4 640 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 TTI2Q6NXR4 508 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 ERAP2Q6P179 960 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 CYFIP1Q7L576 1253 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 AACSQ86V21 672 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 RALGPS2Q86X27 583 aaPredicted RBP8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 IRF2BP1Q8IU81 584 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 TRIM59Q8IWR1 403 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 ULK2Q8IYT8 1036 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 CLYBLQ8N0X4 340 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 SLC4A11Q8NBS3 891 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 LHFPL5Q8TAF8 219 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 EPS8L1Q8TE68 723 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 CIDECQ96AQ7 238 aaPredicted RBP8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 ISOC1Q96CN7 298 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 HES6Q96HZ4 224 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 CNDP2Q96KP4 475 aaKnown RBP8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 TNIP3Q96KP6 325 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 PANX3Q96QZ0 392 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 CYTH2Q99418 400 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 TM9SF2Q99805 663 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 ACAT2Q9BWD1 397 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms