RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 KIF9Q9HAQ2 790 aa9.18□□□□□ -0.94
SMG6-216ENST00000575176 ACP6Q9NPH0 428 aa9.18□□□□□ -0.94
SMG6-216ENST00000575176 CYLDQ9NQC7 956 aa9.18□□□□□ -0.94
SMG6-216ENST00000575176 TDP1Q9NUW8 608 aa9.18□□□□□ -0.94
SMG6-216ENST00000575176 C2orf42Q9NWW7 574 aa9.18□□□□□ -0.94
SMG6-216ENST00000575176 TSPAN16Q9UKR8 245 aa9.18□□□□□ -0.94
SMG6-216ENST00000575176 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.18□□□□□ -0.94
SMG6-216ENST00000575176 R3HCC1Q9Y3T6 440 aaKnown RBP9.18□□□□□ -0.94
SMG6-216ENST00000575176 ATP8B3O60423 1300 aa9.17□□□□□ -0.94
SMG6-216ENST00000575176 KANSL1LA0AUZ9 987 aa9.17□□□□□ -0.94
SMG6-216ENST00000575176 ANTXRLA6NF34 631 aa9.17□□□□□ -0.94
SMG6-216ENST00000575176 GALR2O43603 387 aaPredicted RBP9.17□□□□□ -0.94
SMG6-216ENST00000575176 DCNP07585 359 aaKnown RBP9.17□□□□□ -0.94
SMG6-216ENST00000575176 PFKLP17858 780 aa9.17□□□□□ -0.94
SMG6-216ENST00000575176 SLC9A1P19634 815 aa9.17□□□□□ -0.94
SMG6-216ENST00000575176 TBXAS1P24557 533 aaPredicted RBP9.17□□□□□ -0.94
SMG6-216ENST00000575176 PON1P27169 355 aa9.17□□□□□ -0.94
SMG6-216ENST00000575176 ANXA13P27216 316 aa9.17□□□□□ -0.94
SMG6-216ENST00000575176 HOXC13P31276 330 aa9.17□□□□□ -0.94
SMG6-216ENST00000575176 PFKPQ01813 784 aa9.17□□□□□ -0.94
SMG6-216ENST00000575176 NHLH1Q02575 133 aa9.17□□□□□ -0.94
SMG6-216ENST00000575176 CCINQ13939 588 aa9.17□□□□□ -0.94
SMG6-216ENST00000575176 ARHGAP29Q52LW3 1261 aa9.17□□□□□ -0.94
SMG6-216ENST00000575176 ARHGAP15Q53QZ3 475 aa9.17□□□□□ -0.94
SMG6-216ENST00000575176 RRAGAQ7L523 313 aa9.17□□□□□ -0.94
SMG6-216ENST00000575176 PIGZQ86VD9 579 aa9.17□□□□□ -0.94
SMG6-216ENST00000575176 FLCNQ8NFG4 579 aa9.17□□□□□ -0.94
SMG6-216ENST00000575176 OLIG1Q8TAK6 271 aa9.17□□□□□ -0.94
SMG6-216ENST00000575176 ENOX1Q8TC92 643 aaKnown RBP9.17□□□□□ -0.94
SMG6-216ENST00000575176 MRPS31Q92665 395 aaKnown RBP9.17□□□□□ -0.94
SMG6-216ENST00000575176 IRF7Q92985 503 aa9.17□□□□□ -0.94
SMG6-216ENST00000575176 E2F7Q96AV8 911 aa9.17□□□□□ -0.94
SMG6-216ENST00000575176 NT5C1BQ96P26 610 aa9.17□□□□□ -0.94
SMG6-216ENST00000575176 CRACR2AQ9BSW2 395 aa9.17□□□□□ -0.94
SMG6-216ENST00000575176 NAA15Q9BXJ9 866 aaKnown RBP9.17□□□□□ -0.94
SMG6-216ENST00000575176 OSBPL6Q9BZF3 934 aa9.17□□□□□ -0.94
SMG6-216ENST00000575176 CYTH4Q9UIA0 394 aa9.17□□□□□ -0.94
SMG6-216ENST00000575176 FBXL21Q9UKT6 434 aa9.17□□□□□ -0.94
SMG6-216ENST00000575176 SCML2Q9UQR0 700 aa9.17□□□□□ -0.94
SMG6-216ENST00000575176 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.17□□□□□ -0.94
SMG6-216ENST00000575176 PIAS3Q9Y6X2 628 aa9.17□□□□□ -0.94
SMG6-216ENST00000575176 SPAG17Q6Q759 2223 aa9.16□□□□□ -0.94
SMG6-216ENST00000575176 MYO18AQ92614 2054 aaKnown RBP9.16□□□□□ -0.94
SMG6-216ENST00000575176 TRAV19A0A0A6YYK7 116 aa9.16□□□□□ -0.94
SMG6-216ENST00000575176 SPECC1L-ADORA2AF8WAN1 911 aa9.16□□□□□ -0.94
SMG6-216ENST00000575176 LEFTY2O00292 366 aa9.16□□□□□ -0.94
SMG6-216ENST00000575176 EPHB6O15197 1021 aa9.16□□□□□ -0.94
SMG6-216ENST00000575176 RTN3O95197 1032 aaPredicted RBP9.16□□□□□ -0.94
SMG6-216ENST00000575176 PAEPP09466 180 aa9.16□□□□□ -0.94
SMG6-216ENST00000575176 USP17L7P0C7H9 530 aa9.16□□□□□ -0.94
SMG6-216ENST00000575176 PNMA6AP0CW24 399 aaPredicted RBP9.16□□□□□ -0.94
SMG6-216ENST00000575176 CCDC192P0DO97 292 aa9.16□□□□□ -0.94
SMG6-216ENST00000575176 CHRNB1P11230 501 aa9.16□□□□□ -0.94
SMG6-216ENST00000575176 BRD2P25440 801 aaKnown RBP9.16□□□□□ -0.94
SMG6-216ENST00000575176 YWHAQP27348 245 aa9.16□□□□□ -0.94
SMG6-216ENST00000575176 AVPR1AP37288 418 aa9.16□□□□□ -0.94
SMG6-216ENST00000575176 PLA2G5P39877 138 aa9.16□□□□□ -0.94
SMG6-216ENST00000575176 PLA2G4AP47712 749 aa9.16□□□□□ -0.94
SMG6-216ENST00000575176 NUBP1P53384 320 aa9.16□□□□□ -0.94
SMG6-216ENST00000575176 PDE4CQ08493 712 aa9.16□□□□□ -0.94
SMG6-216ENST00000575176 MAN2A1Q16706 1144 aa9.16□□□□□ -0.94
SMG6-216ENST00000575176 GOLGA7BQ2TAP0 167 aa9.16□□□□□ -0.94
SMG6-216ENST00000575176 HSP90AA4PQ58FG1 418 aa9.16□□□□□ -0.94
SMG6-216ENST00000575176 CT47A1Q5JQC4 288 aaPredicted RBP9.16□□□□□ -0.94
SMG6-216ENST00000575176 CCDC183Q5T5S1 534 aa9.16□□□□□ -0.94
SMG6-216ENST00000575176 PM20D1Q6GTS8 502 aa9.16□□□□□ -0.94
SMG6-216ENST00000575176 PKN3Q6P5Z2 889 aa9.16□□□□□ -0.94
SMG6-216ENST00000575176 LCLAT1Q6UWP7 414 aa9.16□□□□□ -0.94
SMG6-216ENST00000575176 SUGP1Q8IWZ8 645 aaKnown RBP9.16□□□□□ -0.94
SMG6-216ENST00000575176 PPM1KQ8N3J5 372 aa9.16□□□□□ -0.94
SMG6-216ENST00000575176 PHTF2Q8N3S3 785 aa9.16□□□□□ -0.94
SMG6-216ENST00000575176 ZNF276Q8N554 614 aa9.16□□□□□ -0.94
SMG6-216ENST00000575176 TTC39CQ8N584 583 aa9.16□□□□□ -0.94
SMG6-216ENST00000575176 KIAA1958Q8N8K9 716 aa9.16□□□□□ -0.94
SMG6-216ENST00000575176 ANKRD52Q8NB46 1076 aa9.16□□□□□ -0.94
SMG6-216ENST00000575176 RBBP8NLQ8NC74 664 aaPredicted RBP9.16□□□□□ -0.94
SMG6-216ENST00000575176 SH3RF2Q8TEC5 729 aa9.16□□□□□ -0.94
SMG6-216ENST00000575176 SLC35F5Q8WV83 523 aa9.16□□□□□ -0.94
SMG6-216ENST00000575176 OSCP1Q8WVF1 389 aa9.16□□□□□ -0.94
SMG6-216ENST00000575176 NELL1Q92832 810 aa9.16□□□□□ -0.94
SMG6-216ENST00000575176 FBXO32Q969P5 355 aa9.16□□□□□ -0.94
SMG6-216ENST00000575176 GCNAQ96QF7 691 aa9.16□□□□□ -0.94
SMG6-216ENST00000575176 MED10Q9BTT4 135 aa9.16□□□□□ -0.94
SMG6-216ENST00000575176 GANQ9H2C0 597 aa9.16□□□□□ -0.94
SMG6-216ENST00000575176 BRD9Q9H8M2 597 aa9.16□□□□□ -0.94
SMG6-216ENST00000575176 FBRSL1Q9HCM7 1045 aaKnown RBP9.16□□□□□ -0.94
SMG6-216ENST00000575176 TRPC7Q9HCX4 862 aa9.16□□□□□ -0.94
SMG6-216ENST00000575176 PRMT8Q9NR22 394 aaPredicted RBP9.16□□□□□ -0.94
SMG6-216ENST00000575176 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.16□□□□□ -0.94
SMG6-216ENST00000575176 COMMD8Q9NX08 183 aa9.16□□□□□ -0.94
SMG6-216ENST00000575176 TRPM5Q9NZQ8 1165 aa9.16□□□□□ -0.94
SMG6-216ENST00000575176 APEX2Q9UBZ4 518 aa9.16□□□□□ -0.94
SMG6-216ENST00000575176 NFE2L3Q9Y4A8 694 aa9.16□□□□□ -0.94
SMG6-216ENST00000575176 CPQQ9Y646 472 aa9.16□□□□□ -0.94
SMG6-216ENST00000575176 WNT6Q9Y6F9 365 aa9.16□□□□□ -0.94
SMG6-216ENST00000575176 SPTBN4Q9H254 2564 aa9.16□□□□□ -0.94
SMG6-216ENST00000575176 RIF1Q5UIP0 2472 aaKnown RBP9.15□□□□□ -0.94
SMG6-216ENST00000575176 A0A1W2PQH9 124 aa9.15□□□□□ -0.94
SMG6-216ENST00000575176 GFRA2O00451 464 aa9.15□□□□□ -0.94
SMG6-216ENST00000575176 SCAMP3O14828 347 aaKnown RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms