RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 RHBDF2Q6PJF5 856 aa12.73□□□□□ -0.37
CTNS-208ENST00000574218 CRELD2Q6UXH1 353 aaPredicted RBP12.73□□□□□ -0.37
CTNS-208ENST00000574218 DPH6Q7L8W6 267 aa12.73□□□□□ -0.37
CTNS-208ENST00000574218 C12orf40Q86WS4 652 aa12.73□□□□□ -0.37
CTNS-208ENST00000574218 SFTPA1Q8IWL2 248 aa12.73□□□□□ -0.37
CTNS-208ENST00000574218 SYCP3Q8IZU3 236 aa12.73□□□□□ -0.37
CTNS-208ENST00000574218 TRIML1Q8N9V2 468 aa12.73□□□□□ -0.37
CTNS-208ENST00000574218 OR2I1PQ8NGU4 316 aa12.73□□□□□ -0.37
CTNS-208ENST00000574218 HNRNPLLQ8WVV9 542 aaKnown RBP12.73□□□□□ -0.37
CTNS-208ENST00000574218 LARP4BQ92615 738 aaKnown RBP12.73□□□□□ -0.37
CTNS-208ENST00000574218 OTUB2Q96DC9 234 aa12.73□□□□□ -0.37
CTNS-208ENST00000574218 CAMK1GQ96NX5 476 aa12.73□□□□□ -0.37
CTNS-208ENST00000574218 ACCSQ96QU6 501 aa12.73□□□□□ -0.37
CTNS-208ENST00000574218 ST6GALNAC4Q9H4F1 302 aa12.73□□□□□ -0.37
CTNS-208ENST00000574218 CYP8B1Q9UNU6 501 aa12.73□□□□□ -0.37
CTNS-208ENST00000574218 SH3BP1Q9Y3L3 701 aa12.73□□□□□ -0.37
CTNS-208ENST00000574218 APC2O95996 2303 aa12.72□□□□□ -0.37
CTNS-208ENST00000574218 GOLGA4Q13439 2230 aaKnown RBP12.72□□□□□ -0.37
CTNS-208ENST00000574218 A0A0A0MRY4 1105 aa12.72□□□□□ -0.37
CTNS-208ENST00000574218 IGHV1OR15-9A0A0B4J2B8 117 aa12.72□□□□□ -0.37
CTNS-208ENST00000574218 E2F8A0AVK6 867 aa12.72□□□□□ -0.37
CTNS-208ENST00000574218 ZNF840PA6NDX5 716 aa12.72□□□□□ -0.37
CTNS-208ENST00000574218 H3BQV1 296 aa12.72□□□□□ -0.37
CTNS-208ENST00000574218 TNNC2P02585 160 aa12.72□□□□□ -0.37
CTNS-208ENST00000574218 GABRG2P18507 467 aa12.72□□□□□ -0.37
CTNS-208ENST00000574218 NTSR1P30989 418 aa12.72□□□□□ -0.37
CTNS-208ENST00000574218 ZXDBP98169 803 aa12.72□□□□□ -0.37
CTNS-208ENST00000574218 ANO4Q32M45 955 aa12.72□□□□□ -0.37
CTNS-208ENST00000574218 WDR45BQ5MNZ6 344 aa12.72□□□□□ -0.37
CTNS-208ENST00000574218 LY6G5CQ5SRR4 150 aa12.72□□□□□ -0.37
CTNS-208ENST00000574218 C10orf76Q5T2E6 689 aa12.72□□□□□ -0.37
CTNS-208ENST00000574218 FAM171BQ6P995 826 aa12.72□□□□□ -0.37
CTNS-208ENST00000574218 CCNI2Q6ZMN8 369 aaPredicted RBP12.72□□□□□ -0.37
CTNS-208ENST00000574218 HS2ST1Q7LGA3 356 aa12.72□□□□□ -0.37
CTNS-208ENST00000574218 NAT16Q8N8M0 369 aa12.72□□□□□ -0.37
CTNS-208ENST00000574218 PNPLA1Q8N8W4 532 aa12.72□□□□□ -0.37
CTNS-208ENST00000574218 MDM1Q8TC05 714 aa12.72□□□□□ -0.37
CTNS-208ENST00000574218 FOXJ1Q92949 421 aa12.72□□□□□ -0.37
CTNS-208ENST00000574218 COL26A1Q96A83 441 aa12.72□□□□□ -0.37
CTNS-208ENST00000574218 SAAL1Q96ER3 474 aa12.72□□□□□ -0.37
CTNS-208ENST00000574218 LRIG1Q96JA1 1093 aa12.72□□□□□ -0.37
CTNS-208ENST00000574218 FIZ1Q96SL8 496 aa12.72□□□□□ -0.37
CTNS-208ENST00000574218 ZDHHC5Q9C0B5 715 aa12.72□□□□□ -0.37
CTNS-208ENST00000574218 MRPL44Q9H9J2 332 aaKnown RBP12.72□□□□□ -0.37
CTNS-208ENST00000574218 SETXQ7Z333 2677 aaKnown RBP12.72□□□□□ -0.37
CTNS-208ENST00000574218 LAMA5O15230 3695 aa12.71□□□□□ -0.37
CTNS-208ENST00000574218 URB1O60287 2271 aaKnown RBP12.71□□□□□ -0.37
CTNS-208ENST00000574218 MEI4A8MW99 385 aa12.71□□□□□ -0.37
CTNS-208ENST00000574218 GABRDO14764 452 aa12.71□□□□□ -0.37
CTNS-208ENST00000574218 HCRTO43612 131 aa12.71□□□□□ -0.37
CTNS-208ENST00000574218 ATP2C2O75185 946 aa12.71□□□□□ -0.37
CTNS-208ENST00000574218 TULP3O75386 442 aa12.71□□□□□ -0.37
CTNS-208ENST00000574218 PDGFRBP09619 1106 aa12.71□□□□□ -0.37
CTNS-208ENST00000574218 WASP42768 502 aa12.71□□□□□ -0.37
CTNS-208ENST00000574218 USP46P62068 366 aa12.71□□□□□ -0.37
CTNS-208ENST00000574218 NOP14P78316 857 aaKnown RBP12.71□□□□□ -0.37
CTNS-208ENST00000574218 MESP2Q0VG99 397 aa12.71□□□□□ -0.37
CTNS-208ENST00000574218 TAF10Q12962 218 aa12.71□□□□□ -0.37
CTNS-208ENST00000574218 SOWAHAQ2M3V2 549 aa12.71□□□□□ -0.37
CTNS-208ENST00000574218 ZNF720Q7Z2F6 126 aa12.71□□□□□ -0.37
CTNS-208ENST00000574218 SFR1Q86XK3 245 aa12.71□□□□□ -0.37
CTNS-208ENST00000574218 CHPFQ8IZ52 775 aa12.71□□□□□ -0.37
CTNS-208ENST00000574218 TERB1Q8NA31 727 aa12.71□□□□□ -0.37
CTNS-208ENST00000574218 PDZD8Q8NEN9 1154 aa12.71□□□□□ -0.37
CTNS-208ENST00000574218 SETD7Q8WTS6 366 aaKnown RBP12.71□□□□□ -0.37
CTNS-208ENST00000574218 SCFD1Q8WVM8 642 aa12.71□□□□□ -0.37
CTNS-208ENST00000574218 HPDLQ96IR7 371 aa12.71□□□□□ -0.37
CTNS-208ENST00000574218 MMS19Q96T76 1030 aa12.71□□□□□ -0.37
CTNS-208ENST00000574218 TTLL2Q9BWV7 592 aa12.71□□□□□ -0.37
CTNS-208ENST00000574218 MTMR12Q9C0I1 747 aa12.71□□□□□ -0.37
CTNS-208ENST00000574218 NACA2Q9H009 215 aa12.71□□□□□ -0.37
CTNS-208ENST00000574218 RNF38Q9H0F5 515 aa12.71□□□□□ -0.37
CTNS-208ENST00000574218 SNX25Q9H3E2 840 aa12.71□□□□□ -0.37
CTNS-208ENST00000574218 BLOC1S4Q9NUP1 217 aa12.71□□□□□ -0.37
CTNS-208ENST00000574218 SEL1LQ9UBV2 794 aa12.71□□□□□ -0.37
CTNS-208ENST00000574218 FREM2Q5SZK8 3169 aa12.71□□□□□ -0.38
CTNS-208ENST00000574218 GOLGA8IPA6NC78 632 aa12.7□□□□□ -0.38
CTNS-208ENST00000574218 GOLGA8JA6NMD2 632 aa12.7□□□□□ -0.38
CTNS-208ENST00000574218 F8VP50 259 aa12.7□□□□□ -0.38
CTNS-208ENST00000574218 RTN3O95197 1032 aaPredicted RBP12.7□□□□□ -0.38
CTNS-208ENST00000574218 GCNT3O95395 438 aa12.7□□□□□ -0.38
CTNS-208ENST00000574218 OLFM2O95897 454 aa12.7□□□□□ -0.38
CTNS-208ENST00000574218 BMP15O95972 392 aa12.7□□□□□ -0.38
CTNS-208ENST00000574218 OAS1P00973 400 aaKnown RBP12.7□□□□□ -0.38
CTNS-208ENST00000574218 CAPNS1P04632 268 aa12.7□□□□□ -0.38
CTNS-208ENST00000574218 GAP43P17677 238 aa12.7□□□□□ -0.38
CTNS-208ENST00000574218 GARTP22102 1010 aa12.7□□□□□ -0.38
CTNS-208ENST00000574218 ADSSP30520 456 aa12.7□□□□□ -0.38
CTNS-208ENST00000574218 DDIT3P35638 169 aa12.7□□□□□ -0.38
CTNS-208ENST00000574218 LONP1P36776 959 aaKnown RBP12.7□□□□□ -0.38
CTNS-208ENST00000574218 MDH1BQ5I0G3 518 aa12.7□□□□□ -0.38
CTNS-208ENST00000574218 L1TD1Q5T7N2 865 aaKnown RBP12.7□□□□□ -0.38
CTNS-208ENST00000574218 GRAMD4Q6IC98 578 aa12.7□□□□□ -0.38
CTNS-208ENST00000574218 KIAA1324Q6UXG2 1013 aaKnown RBP12.7□□□□□ -0.38
CTNS-208ENST00000574218 TOGARAM2Q6ZUX3 1019 aa12.7□□□□□ -0.38
CTNS-208ENST00000574218 DYMQ7RTS9 669 aa12.7□□□□□ -0.38
CTNS-208ENST00000574218 SLC41A1Q8IVJ1 513 aa12.7□□□□□ -0.38
CTNS-208ENST00000574218 MYCBPAPQ8TBZ2 947 aa12.7□□□□□ -0.38
CTNS-208ENST00000574218 IPO4Q8TEX9 1081 aaKnown RBP12.7□□□□□ -0.38
CTNS-208ENST00000574218 FBXO32Q969P5 355 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms