RNA–Protein interactions for RNA: ENST00000574205.5

CTDNEP1-209, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 1,506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-209ENST00000574205 CEP83Q9Y592 693 aa34.87■■■■□ 3.17
CTDNEP1-209ENST00000574205 LRRC53A6NM62 1247 aa34.86■■■■□ 3.17
CTDNEP1-209ENST00000574205 ZDHHC11BP0C7U3 371 aa34.86■■■■□ 3.17
CTDNEP1-209ENST00000574205 RGS7P49802 495 aa34.86■■■■□ 3.17
CTDNEP1-209ENST00000574205 ADIGQ0VDE8 80 aa34.86■■■■□ 3.17
CTDNEP1-209ENST00000574205 SNX30Q5VWJ9 437 aa34.86■■■■□ 3.17
CTDNEP1-209ENST00000574205 MTSS1LQ765P7 747 aa34.86■■■■□ 3.17
CTDNEP1-209ENST00000574205 MON1AQ86VX9 555 aa34.86■■■■□ 3.17
CTDNEP1-209ENST00000574205 MAB21L3Q8N8X9 362 aa34.86■■■■□ 3.17
CTDNEP1-209ENST00000574205 SLC46A2Q9BY10 475 aa34.86■■■■□ 3.17
CTDNEP1-209ENST00000574205 TRIM5Q9C035 493 aa34.86■■■■□ 3.17
CTDNEP1-209ENST00000574205 PDCL3Q9H2J4 239 aa34.86■■■■□ 3.17
CTDNEP1-209ENST00000574205 TLR8Q9NR97 1041 aaKnown RBP34.86■■■■□ 3.17
CTDNEP1-209ENST00000574205 NOCTQ9UK39 431 aaKnown RBP34.86■■■■□ 3.17
CTDNEP1-209ENST00000574205 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP34.86■■■■□ 3.17
CTDNEP1-209ENST00000574205 NUP210Q8TEM1 1887 aaPredicted RBP34.86■■■■□ 3.17
CTDNEP1-209ENST00000574205 FERP16591 822 aa34.86■■■■□ 3.17
CTDNEP1-209ENST00000574205 ARID5AQ03989 594 aa34.86■■■■□ 3.17
CTDNEP1-209ENST00000574205 FAM78AQ5JUQ0 283 aa34.86■■■■□ 3.17
CTDNEP1-209ENST00000574205 SPECC1LQ69YQ0 1117 aa34.86■■■■□ 3.17
CTDNEP1-209ENST00000574205 PASD1Q8IV76 773 aa34.86■■■■□ 3.17
CTDNEP1-209ENST00000574205 SIX6OS1Q8N1H7 587 aa34.86■■■■□ 3.17
CTDNEP1-209ENST00000574205 SMARCD2Q92925 531 aa34.86■■■■□ 3.17
CTDNEP1-209ENST00000574205 TTC28Q96AY4 2481 aa34.85■■■■□ 3.17
CTDNEP1-209ENST00000574205 AP5Z1O43299 807 aa34.85■■■■□ 3.17
CTDNEP1-209ENST00000574205 PFKLP17858 780 aa34.85■■■■□ 3.17
CTDNEP1-209ENST00000574205 RPL34P49207 117 aaKnown RBP34.85■■■■□ 3.17
CTDNEP1-209ENST00000574205 TAF3Q5VWG9 929 aa34.85■■■■□ 3.17
CTDNEP1-209ENST00000574205 CMTM8Q8IZV2 173 aa34.85■■■■□ 3.17
CTDNEP1-209ENST00000574205 NXPE3Q969Y0 559 aa34.85■■■■□ 3.17
CTDNEP1-209ENST00000574205 CD320Q9NPF0 282 aa34.85■■■■□ 3.17
CTDNEP1-209ENST00000574205 CNGB3Q9NQW8 809 aa34.85■■■■□ 3.17
CTDNEP1-209ENST00000574205 ST7Q9NRC1 585 aa34.85■■■■□ 3.17
CTDNEP1-209ENST00000574205 IGSF9Q9P2J2 1179 aa34.85■■■■□ 3.17
CTDNEP1-209ENST00000574205 MYO10Q9HD67 2058 aa34.85■■■■□ 3.17
CTDNEP1-209ENST00000574205 ANHXE9PGG2 379 aa34.84■■■■□ 3.17
CTDNEP1-209ENST00000574205 ZBED1O96006 694 aa34.84■■■■□ 3.17
CTDNEP1-209ENST00000574205 ABL1P00519 1130 aa34.84■■■■□ 3.17
CTDNEP1-209ENST00000574205 USP17L7P0C7H9 530 aa34.84■■■■□ 3.17
CTDNEP1-209ENST00000574205 WEE1P30291 646 aa34.84■■■■□ 3.17
CTDNEP1-209ENST00000574205 ACADSBP45954 432 aa34.84■■■■□ 3.17
CTDNEP1-209ENST00000574205 CDR2Q01850 454 aa34.84■■■■□ 3.17
CTDNEP1-209ENST00000574205 PM20D1Q6GTS8 502 aa34.84■■■■□ 3.17
CTDNEP1-209ENST00000574205 GPIHBP1Q8IV16 184 aa34.84■■■■□ 3.17
CTDNEP1-209ENST00000574205 SCML4Q8N228 414 aa34.84■■■■□ 3.17
CTDNEP1-209ENST00000574205 ZNF397Q8NF99 534 aaPredicted RBP34.84■■■■□ 3.17
CTDNEP1-209ENST00000574205 ULBP1Q9BZM6 244 aa34.84■■■■□ 3.17
CTDNEP1-209ENST00000574205 TRPV4Q9HBA0 871 aa34.84■■■■□ 3.17
CTDNEP1-209ENST00000574205 TRPC7Q9HCX4 862 aa34.84■■■■□ 3.17
CTDNEP1-209ENST00000574205 CYLDQ9NQC7 956 aa34.84■■■■□ 3.17
CTDNEP1-209ENST00000574205 CYTH4Q9UIA0 394 aa34.84■■■■□ 3.17
CTDNEP1-209ENST00000574205 CAPN11Q9UMQ6 739 aa34.84■■■■□ 3.17
CTDNEP1-209ENST00000574205 C2orf78A6NCI8 922 aa34.83■■■■□ 3.17
CTDNEP1-209ENST00000574205 GYPCP04921 128 aa34.83■■■■□ 3.17
CTDNEP1-209ENST00000574205 MMEP08473 750 aa34.83■■■■□ 3.17
CTDNEP1-209ENST00000574205 AVPR1AP37288 418 aa34.83■■■■□ 3.17
CTDNEP1-209ENST00000574205 PDCLQ13371 301 aa34.83■■■■□ 3.17
CTDNEP1-209ENST00000574205 HTR4Q13639 388 aa34.83■■■■□ 3.17
CTDNEP1-209ENST00000574205 ARID3BQ8IVW6 561 aaPredicted RBP34.83■■■■□ 3.17
CTDNEP1-209ENST00000574205 VSTM4Q8IW00 320 aa34.83■■■■□ 3.17
CTDNEP1-209ENST00000574205 WDTC1Q8N5D0 677 aa34.83■■■■□ 3.17
CTDNEP1-209ENST00000574205 FGF14Q92915 247 aa34.83■■■■□ 3.17
CTDNEP1-209ENST00000574205 NOX5Q96PH1 765 aa34.83■■■■□ 3.17
CTDNEP1-209ENST00000574205 SLC4A5Q9BY07 1137 aa34.83■■■■□ 3.17
CTDNEP1-209ENST00000574205 KCNK12Q9HB15 430 aa34.83■■■■□ 3.17
CTDNEP1-209ENST00000574205 AIPL1Q9NZN9 384 aa34.83■■■■□ 3.17
CTDNEP1-209ENST00000574205 TRAV19A0A0A6YYK7 116 aa34.82■■■■□ 3.16
CTDNEP1-209ENST00000574205 LCP1P13796 627 aa34.82■■■■□ 3.16
CTDNEP1-209ENST00000574205 CDH5P33151 784 aaPredicted RBP34.82■■■■□ 3.16
CTDNEP1-209ENST00000574205 PSEN1P49768 467 aa34.82■■■■□ 3.16
CTDNEP1-209ENST00000574205 TUBP50607 506 aa34.82■■■■□ 3.16
CTDNEP1-209ENST00000574205 SFMBT2Q5VUG0 894 aa34.82■■■■□ 3.16
CTDNEP1-209ENST00000574205 PARM1Q6UWI2 310 aa34.82■■■■□ 3.16
CTDNEP1-209ENST00000574205 IRF2BP2Q7Z5L9 587 aa34.82■■■■□ 3.16
CTDNEP1-209ENST00000574205 TMEM35BQ8NCS4 154 aa34.82■■■■□ 3.16
CTDNEP1-209ENST00000574205 C1orf131Q8NDD1 294 aaKnown RBP34.82■■■■□ 3.16
CTDNEP1-209ENST00000574205 SLC20A1Q8WUM9 679 aa34.82■■■■□ 3.16
CTDNEP1-209ENST00000574205 NUCKS1Q9H1E3 243 aaKnown RBP34.82■■■■□ 3.16
CTDNEP1-209ENST00000574205 ZFP14Q9HCL3 533 aa34.82■■■■□ 3.16
CTDNEP1-209ENST00000574205 NUMBLQ9Y6R0 609 aa34.82■■■■□ 3.16
CTDNEP1-209ENST00000574205 GABBR2O75899 941 aa34.81■■■■□ 3.16
CTDNEP1-209ENST00000574205 OAS1P00973 400 aaKnown RBP34.81■■■■□ 3.16
CTDNEP1-209ENST00000574205 TRIM14Q14142 442 aa34.81■■■■□ 3.16
CTDNEP1-209ENST00000574205 RNF135Q8IUD6 432 aa34.81■■■■□ 3.16
CTDNEP1-209ENST00000574205 LSM8O95777 96 aaKnown RBP34.81■■■■□ 3.16
CTDNEP1-209ENST00000574205 FCARP24071 287 aa34.81■■■■□ 3.16
CTDNEP1-209ENST00000574205 ZBED6P86452 979 aa34.81■■■■□ 3.16
CTDNEP1-209ENST00000574205 TMEM110Q86TL2 294 aa34.81■■■■□ 3.16
CTDNEP1-209ENST00000574205 ARHGAP18Q8N392 663 aa34.81■■■■□ 3.16
CTDNEP1-209ENST00000574205 CPLX3Q8WVH0 158 aa34.81■■■■□ 3.16
CTDNEP1-209ENST00000574205 LUC7L2Q9Y383 392 aaKnown RBP34.81■■■■□ 3.16
CTDNEP1-209ENST00000574205 PIK3R2O00459 728 aa34.8■■■■□ 3.16
CTDNEP1-209ENST00000574205 FBXO21O94952 628 aa34.8■■■■□ 3.16
CTDNEP1-209ENST00000574205 HDCP19113 662 aa34.8■■■■□ 3.16
CTDNEP1-209ENST00000574205 PGFP49763 221 aa34.8■■■■□ 3.16
CTDNEP1-209ENST00000574205 FMO1Q01740 532 aa34.8■■■■□ 3.16
CTDNEP1-209ENST00000574205 ASIC2Q16515 512 aa34.8■■■■□ 3.16
CTDNEP1-209ENST00000574205 HECTD3Q5T447 861 aa34.8■■■■□ 3.16
CTDNEP1-209ENST00000574205 ELSPBP1Q96BH3 223 aa34.8■■■■□ 3.16
CTDNEP1-209ENST00000574205 NMUR1Q9HB89 426 aa34.8■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms